RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 PHTF1Q9UMS5 762 aa4.58□□□□□ -1.68
GTF3C3-207ENST00000451088 STX8Q9UNK0 236 aa4.58□□□□□ -1.68
GTF3C3-207ENST00000451088 CEP83Q9Y592 693 aa4.58□□□□□ -1.68
GTF3C3-207ENST00000451088 RALGAPA1Q6GYQ0 2036 aa4.58□□□□□ -1.68
GTF3C3-207ENST00000451088 MICAL3Q7RTP6 2002 aa4.58□□□□□ -1.68
GTF3C3-207ENST00000451088 FANCMQ8IYD8 2048 aa4.58□□□□□ -1.68
GTF3C3-207ENST00000451088 RALGAPA2Q2PPJ7 1873 aa4.58□□□□□ -1.68
GTF3C3-207ENST00000451088 USP9XQ93008 2570 aaPredicted RBP4.58□□□□□ -1.68
GTF3C3-207ENST00000451088 SDK1Q7Z5N4 2213 aa4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 ZMYM6O95789 1325 aa4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 RAD50Q92878 1312 aa4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 DPPA5A6NC42 116 aa4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 C3orf70A6NLC5 250 aaPredicted RBP4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 RHODO00212 210 aa4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 HIP1O00291 1037 aa4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 RANBP6O60518 1105 aaKnown RBP4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 IFNA2P01563 188 aa4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 CYP3A4P08684 503 aa4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 IQCF3P0C7M6 154 aa4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 SUPT20HL2P0C7V6 817 aa4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 ARRB2P32121 409 aa4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 RFC2P35250 354 aa4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 RRP1P56182 461 aaKnown RBP4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 RPL15P61313 204 aaKnown RBP4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 HDAC1Q13547 482 aaPredicted RBP4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 ALX1Q15699 326 aa4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 CCDC96Q2M329 555 aa4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 MCMDC2Q4G0Z9 681 aa4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 DGKKQ5KSL6 1271 aa4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 ANKRD45Q5TZF3 282 aa4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 TMEM88Q6PEY1 159 aa4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 RPAINQ86UA6 219 aa4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 ACRBPQ8NEB7 543 aa4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 TMEM174Q8WUU8 243 aa4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 ASB5Q8WWX0 329 aa4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 CENPIQ92674 756 aaPredicted RBP4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 RWDD1Q9H446 243 aaPredicted RBP4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 AAMDCQ9H7C9 122 aa4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 RAVER2Q9HCJ3 691 aaKnown RBP4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 RNF146Q9NTX7 359 aa4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 FNIP2Q9P278 1114 aa4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 SLC39A10Q9ULF5 831 aa4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 NFU1Q9UMS0 254 aa4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 Q9Y3F1 56 aa4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 PCDHGB2Q9Y5G2 931 aa4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 COL11A1P12107 1806 aaPredicted RBP4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 DOCK8Q8NF50 2099 aa4.57□□□□□ -1.68
GTF3C3-207ENST00000451088 ZNF462Q96JM2 2506 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 NLRC5Q86WI3 1866 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 CYP3A7-CYP3A51PA0A087WV96 503 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 FOXO6A8MYZ6 492 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 MDM4O15151 490 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 CAND2O75155 1236 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 RPP40O75818 363 aaKnown RBP4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 BAIAP3O94812 1187 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 GJB5O95377 273 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 ALDOAP04075 364 aaKnown RBP4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 ICAM1P05362 532 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 TOP1P11387 765 aaKnown RBP4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 MCCP23508 829 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 CYP3A7P24462 503 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 ICAM3P32942 547 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 PSMC6P62333 389 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 DEFB103AP81534 67 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 SHC2P98077 582 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 TNFAIP2Q03169 654 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 TRAF1Q13077 416 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 GPM6BQ13491 265 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 EPC2Q52LR7 807 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 GPATCH4Q5T3I0 446 aaKnown RBP4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 CCDC181Q5TID7 509 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 MFSD6Q6ZSS7 791 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 ARMCX2Q7L311 632 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 IQCA1Q86XH1 822 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 DCLK2Q8N568 766 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 FAM133AQ8N9E0 248 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 DEPTORQ8TB45 409 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 WDR60Q8WVS4 1066 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 ESR2Q92731 530 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 KAT2AQ92830 837 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 ATP2A3Q93084 1043 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 THOC3Q96J01 351 aaKnown RBP4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 RPGRIP1Q96KN7 1286 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 SGCZQ96LD1 299 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 TTC14Q96N46 770 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 ALDH8A1Q9H2A2 487 aaPredicted RBP4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 TASP1Q9H6P5 420 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 CD207Q9UJ71 328 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 PRDM4Q9UKN5 801 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 CCPG1Q9ULG6 757 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 SLC8A2Q9UPR5 921 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 ATG2AQ2TAZ0 1938 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 CEP295Q9C0D2 2601 aa4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 MYO5AQ9Y4I1 1855 aaKnown RBP4.56□□□□□ -1.68
GTF3C3-207ENST00000451088 GTPBP1O00178 669 aaKnown RBP4.55□□□□□ -1.68
GTF3C3-207ENST00000451088 HSP90AA1P07900 732 aaKnown RBP4.55□□□□□ -1.68
GTF3C3-207ENST00000451088 ALDOCP09972 364 aaKnown RBP4.55□□□□□ -1.68
GTF3C3-207ENST00000451088 HSPD1P10809 573 aaKnown RBP4.55□□□□□ -1.68
GTF3C3-207ENST00000451088 CIITAP33076 1130 aa4.55□□□□□ -1.68
GTF3C3-207ENST00000451088 CLCN5P51795 746 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms