RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 ERI2A8K979 691 aaKnown RBP13.05□□□□□ -0.32
VPS33A-202ENST00000451053 LATO43561 262 aa13.05□□□□□ -0.32
VPS33A-202ENST00000451053 SUN1O94901 812 aa13.05□□□□□ -0.32
VPS33A-202ENST00000451053 CLDN7O95471 211 aa13.05□□□□□ -0.32
VPS33A-202ENST00000451053 ELFN1P0C7U0 828 aa13.05□□□□□ -0.32
VPS33A-202ENST00000451053 ITPKAP23677 461 aa13.05□□□□□ -0.32
VPS33A-202ENST00000451053 NFKBIAP25963 317 aa13.05□□□□□ -0.32
VPS33A-202ENST00000451053 IVDP26440 423 aa13.05□□□□□ -0.32
VPS33A-202ENST00000451053 MAOBP27338 520 aa13.05□□□□□ -0.32
VPS33A-202ENST00000451053 NBL1P41271 181 aa13.05□□□□□ -0.32
VPS33A-202ENST00000451053 GRIA1P42261 906 aa13.05□□□□□ -0.32
VPS33A-202ENST00000451053 VSNL1P62760 191 aa13.05□□□□□ -0.32
VPS33A-202ENST00000451053 CDK16Q00536 496 aa13.05□□□□□ -0.32
VPS33A-202ENST00000451053 KCNJ11Q14654 390 aa13.05□□□□□ -0.32
VPS33A-202ENST00000451053 SPDYCQ5MJ68 293 aa13.05□□□□□ -0.32
VPS33A-202ENST00000451053 ANKRD22Q5VYY1 191 aa13.05□□□□□ -0.32
VPS33A-202ENST00000451053 LYSMD4Q5XG99 296 aa13.05□□□□□ -0.32
VPS33A-202ENST00000451053 LRRC66Q68CR7 880 aa13.05□□□□□ -0.32
VPS33A-202ENST00000451053 DENND2CQ68D51 928 aa13.05□□□□□ -0.32
VPS33A-202ENST00000451053 NAPEPLDQ6IQ20 393 aa13.05□□□□□ -0.32
VPS33A-202ENST00000451053 CCNI2Q6ZMN8 369 aaPredicted RBP13.05□□□□□ -0.32
VPS33A-202ENST00000451053 LYSMD3Q7Z3D4 306 aa13.05□□□□□ -0.32
VPS33A-202ENST00000451053 HSD11B1LQ7Z5J1 315 aa13.05□□□□□ -0.32
VPS33A-202ENST00000451053 SUMF1Q8NBK3 374 aa13.05□□□□□ -0.32
VPS33A-202ENST00000451053 OR52K1Q8NGK4 314 aa13.05□□□□□ -0.32
VPS33A-202ENST00000451053 CPT1BQ92523 772 aa13.05□□□□□ -0.32
VPS33A-202ENST00000451053 ART4Q93070 314 aa13.05□□□□□ -0.32
VPS33A-202ENST00000451053 LYSMD1Q96S90 227 aa13.05□□□□□ -0.32
VPS33A-202ENST00000451053 C1QTNF2Q9BXJ5 285 aa13.05□□□□□ -0.32
VPS33A-202ENST00000451053 ARNT2Q9HBZ2 717 aa13.05□□□□□ -0.32
VPS33A-202ENST00000451053 EIF2B3Q9NR50 452 aaKnown RBP13.05□□□□□ -0.32
VPS33A-202ENST00000451053 PIH1D1Q9NWS0 290 aaKnown RBP13.05□□□□□ -0.32
VPS33A-202ENST00000451053 GRHL1Q9NZI5 618 aa13.05□□□□□ -0.32
VPS33A-202ENST00000451053 EIF2B4Q9UI10 523 aaKnown RBP13.05□□□□□ -0.32
VPS33A-202ENST00000451053 ZNF711Q9Y462 761 aa13.05□□□□□ -0.32
VPS33A-202ENST00000451053 ATXN2Q99700 1313 aaKnown RBP13.05□□□□□ -0.32
VPS33A-202ENST00000451053 TNRC6BQ9UPQ9 1833 aaKnown RBP13.04□□□□□ -0.32
VPS33A-202ENST00000451053 C1orf232A0A0U1RR37 186 aa13.04□□□□□ -0.32
VPS33A-202ENST00000451053 A0A1W2PPC4 97 aa13.04□□□□□ -0.32
VPS33A-202ENST00000451053 AURKAO14965 403 aa13.04□□□□□ -0.32
VPS33A-202ENST00000451053 SLC31A1O15431 190 aa13.04□□□□□ -0.32
VPS33A-202ENST00000451053 TM7SF2O76062 418 aa13.04□□□□□ -0.32
VPS33A-202ENST00000451053 SLC4A1P02730 911 aa13.04□□□□□ -0.32
VPS33A-202ENST00000451053 C1SP09871 688 aa13.04□□□□□ -0.32
VPS33A-202ENST00000451053 TPH1P17752 444 aa13.04□□□□□ -0.32
VPS33A-202ENST00000451053 TPSB2P20231 275 aa13.04□□□□□ -0.32
VPS33A-202ENST00000451053 MAGEA6P43360 314 aa13.04□□□□□ -0.32
VPS33A-202ENST00000451053 CARSP49589 748 aaKnown RBP13.04□□□□□ -0.32
VPS33A-202ENST00000451053 ITGA8P53708 1063 aa13.04□□□□□ -0.32
VPS33A-202ENST00000451053 PLTPP55058 493 aa13.04□□□□□ -0.32
VPS33A-202ENST00000451053 SARNPP82979 210 aaKnown RBP13.04□□□□□ -0.32
VPS33A-202ENST00000451053 MSLNQ13421 630 aaPredicted RBP13.04□□□□□ -0.32
VPS33A-202ENST00000451053 ARHGEF7Q14155 803 aa13.04□□□□□ -0.32
VPS33A-202ENST00000451053 ACOX1Q15067 660 aa13.04□□□□□ -0.32
VPS33A-202ENST00000451053 TPSAB1Q15661 275 aa13.04□□□□□ -0.32
VPS33A-202ENST00000451053 RNASEH2BQ5TBB1 312 aaKnown RBP13.04□□□□□ -0.32
VPS33A-202ENST00000451053 HIBCHQ6NVY1 386 aaPredicted RBP13.04□□□□□ -0.32
VPS33A-202ENST00000451053 RFLNAQ6ZTI6 216 aa13.04□□□□□ -0.32
VPS33A-202ENST00000451053 CBARPQ8N350 705 aaPredicted RBP13.04□□□□□ -0.32
VPS33A-202ENST00000451053 BLOC1S5Q8TDH9 187 aa13.04□□□□□ -0.32
VPS33A-202ENST00000451053 EID2BQ96D98 161 aa13.04□□□□□ -0.32
VPS33A-202ENST00000451053 COQ10AQ96MF6 247 aa13.04□□□□□ -0.32
VPS33A-202ENST00000451053 FMO2Q99518 471 aa13.04□□□□□ -0.32
VPS33A-202ENST00000451053 MYOCQ99972 504 aa13.04□□□□□ -0.32
VPS33A-202ENST00000451053 HINFPQ9BQA5 517 aa13.04□□□□□ -0.32
VPS33A-202ENST00000451053 SLC17A9Q9BYT1 436 aa13.04□□□□□ -0.32
VPS33A-202ENST00000451053 MAGEE1Q9HCI5 957 aa13.04□□□□□ -0.32
VPS33A-202ENST00000451053 FZD3Q9NPG1 666 aa13.04□□□□□ -0.32
VPS33A-202ENST00000451053 RAB23Q9ULC3 237 aa13.04□□□□□ -0.32
VPS33A-202ENST00000451053 NFU1Q9UMS0 254 aa13.04□□□□□ -0.32
VPS33A-202ENST00000451053 LRRK1Q38SD2 2015 aa13.04□□□□□ -0.32
VPS33A-202ENST00000451053 DYNC1I1O14576 645 aa13.03□□□□□ -0.32
VPS33A-202ENST00000451053 WNT9AO14904 365 aa13.03□□□□□ -0.32
VPS33A-202ENST00000451053 RAD51BO15315 384 aa13.03□□□□□ -0.32
VPS33A-202ENST00000451053 LZTS3O60299 673 aaPredicted RBP13.03□□□□□ -0.32
VPS33A-202ENST00000451053 RECQL5O94762 991 aaPredicted RBP13.03□□□□□ -0.32
VPS33A-202ENST00000451053 TMEM63AO94886 807 aa13.03□□□□□ -0.32
VPS33A-202ENST00000451053 EPN2O95208 641 aa13.03□□□□□ -0.32
VPS33A-202ENST00000451053 PAK4O96013 591 aaPredicted RBP13.03□□□□□ -0.32
VPS33A-202ENST00000451053 ZNF30P17039 623 aa13.03□□□□□ -0.32
VPS33A-202ENST00000451053 CD27P26842 260 aa13.03□□□□□ -0.32
VPS33A-202ENST00000451053 ETV3P41162 512 aa13.03□□□□□ -0.32
VPS33A-202ENST00000451053 STC1P52823 247 aa13.03□□□□□ -0.32
VPS33A-202ENST00000451053 PTSQ03393 145 aa13.03□□□□□ -0.32
VPS33A-202ENST00000451053 SGCGQ13326 291 aa13.03□□□□□ -0.32
VPS33A-202ENST00000451053 SETMARQ53H47 684 aaPredicted RBP13.03□□□□□ -0.32
VPS33A-202ENST00000451053 WDR45BQ5MNZ6 344 aa13.03□□□□□ -0.32
VPS33A-202ENST00000451053 EMBQ6PCB8 327 aa13.03□□□□□ -0.32
VPS33A-202ENST00000451053 Q6ZVL8 140 aa13.03□□□□□ -0.32
VPS33A-202ENST00000451053 ZNF534Q76KX8 674 aa13.03□□□□□ -0.32
VPS33A-202ENST00000451053 CYP2U1Q7Z449 544 aa13.03□□□□□ -0.32
VPS33A-202ENST00000451053 LINC00523Q86TU6 105 aa13.03□□□□□ -0.32
VPS33A-202ENST00000451053 RGL4Q8IZJ4 473 aa13.03□□□□□ -0.32
VPS33A-202ENST00000451053 TTC30BQ8N4P2 665 aa13.03□□□□□ -0.32
VPS33A-202ENST00000451053 FBXO25Q8TCJ0 367 aa13.03□□□□□ -0.32
VPS33A-202ENST00000451053 DNASE2BQ8WZ79 361 aa13.03□□□□□ -0.32
VPS33A-202ENST00000451053 PHOX2BQ99453 314 aa13.03□□□□□ -0.32
VPS33A-202ENST00000451053 KLF6Q99612 283 aaPredicted RBP13.03□□□□□ -0.32
VPS33A-202ENST00000451053 GPR63Q9BZJ6 419 aa13.03□□□□□ -0.32
VPS33A-202ENST00000451053 PHACTR1Q9C0D0 580 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms