RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 OR56A4Q8NGH8 313 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 ATL2Q8NHH9 583 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 CCL4L1Q8NHW4 92 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 TPCN2Q8NHX9 752 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 SLC35G2Q8TBE7 412 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 ARRDC2Q8TBH0 407 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 NSMCE1Q8WV22 266 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 FGF11Q92914 225 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 NAT6Q93015 286 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 NUS1Q96E22 293 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 PRR11Q96HE9 360 aaPredicted RBP12.37□□□□□ -0.43
MSH5-209ENST00000450148 DCBLD2Q96PD2 775 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 CCDC3Q9BQI4 270 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 TEX101Q9BY14 249 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 ABCG4Q9H172 646 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 TSPY26PQ9H489 355 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 RAI2Q9Y5P3 530 aa12.37□□□□□ -0.43
MSH5-209ENST00000450148 DSPP15924 2871 aaKnown RBP12.36□□□□□ -0.43
MSH5-209ENST00000450148 C3orf70A6NLC5 250 aaPredicted RBP12.36□□□□□ -0.43
MSH5-209ENST00000450148 CACNB4O00305 520 aaPredicted RBP12.36□□□□□ -0.43
MSH5-209ENST00000450148 NOBOXO60393 691 aa12.36□□□□□ -0.43
MSH5-209ENST00000450148 USP12O75317 370 aa12.36□□□□□ -0.43
MSH5-209ENST00000450148 TCEA3O75764 348 aa12.36□□□□□ -0.43
MSH5-209ENST00000450148 SOD1P00441 154 aa12.36□□□□□ -0.43
MSH5-209ENST00000450148 MPOP05164 745 aa12.36□□□□□ -0.43
MSH5-209ENST00000450148 HLA-DQB2P05538 268 aa12.36□□□□□ -0.43
MSH5-209ENST00000450148 KRT7P08729 469 aa12.36□□□□□ -0.43
MSH5-209ENST00000450148 CYP2A6P11509 494 aaPredicted RBP12.36□□□□□ -0.43
MSH5-209ENST00000450148 MYCLP1P12525 358 aaPredicted RBP12.36□□□□□ -0.43
MSH5-209ENST00000450148 CTPS1P17812 591 aa12.36□□□□□ -0.43
MSH5-209ENST00000450148 ETV3P41162 512 aa12.36□□□□□ -0.43
MSH5-209ENST00000450148 LSSP48449 732 aa12.36□□□□□ -0.43
MSH5-209ENST00000450148 RPIAP49247 311 aa12.36□□□□□ -0.43
MSH5-209ENST00000450148 DSC2Q02487 901 aa12.36□□□□□ -0.43
MSH5-209ENST00000450148 NIPAL4Q0D2K0 466 aa12.36□□□□□ -0.43
MSH5-209ENST00000450148 TBX2Q13207 712 aaPredicted RBP12.36□□□□□ -0.43
MSH5-209ENST00000450148 MESDQ14696 234 aa12.36□□□□□ -0.43
MSH5-209ENST00000450148 IFI16Q16666 785 aaKnown RBP12.36□□□□□ -0.43
MSH5-209ENST00000450148 Q6ZVL8 140 aa12.36□□□□□ -0.43
MSH5-209ENST00000450148 GKN2Q86XP6 184 aa12.36□□□□□ -0.43
MSH5-209ENST00000450148 PLD5Q8N7P1 536 aa12.36□□□□□ -0.43
MSH5-209ENST00000450148 RNF214Q8ND24 703 aa12.36□□□□□ -0.43
MSH5-209ENST00000450148 PTCD2Q8WV60 388 aaKnown RBP12.36□□□□□ -0.43
MSH5-209ENST00000450148 GLMNQ92990 594 aa12.36□□□□□ -0.43
MSH5-209ENST00000450148 HDAC11Q96DB2 347 aa12.36□□□□□ -0.43
MSH5-209ENST00000450148 HIC2Q96JB3 615 aa12.36□□□□□ -0.43
MSH5-209ENST00000450148 RNF157Q96PX1 679 aa12.36□□□□□ -0.43
MSH5-209ENST00000450148 FRMD8Q9BZ67 464 aaPredicted RBP12.36□□□□□ -0.43
MSH5-209ENST00000450148 POLR1EQ9GZS1 481 aaKnown RBP12.36□□□□□ -0.43
MSH5-209ENST00000450148 TMEM168Q9H0V1 697 aa12.36□□□□□ -0.43
MSH5-209ENST00000450148 WDR26Q9H7D7 661 aa12.36□□□□□ -0.43
MSH5-209ENST00000450148 NHEJ1Q9H9Q4 299 aaPredicted RBP12.36□□□□□ -0.43
MSH5-209ENST00000450148 POLR1BQ9H9Y6 1135 aa12.36□□□□□ -0.43
MSH5-209ENST00000450148 ASCL3Q9NQ33 180 aa12.36□□□□□ -0.43
MSH5-209ENST00000450148 SPTLC3Q9NUV7 552 aa12.36□□□□□ -0.43
MSH5-209ENST00000450148 KCTD5Q9NXV2 234 aa12.36□□□□□ -0.43
MSH5-209ENST00000450148 DTLQ9NZJ0 730 aa12.36□□□□□ -0.43
MSH5-209ENST00000450148 SIRPGQ9P1W8 387 aa12.36□□□□□ -0.43
MSH5-209ENST00000450148 AMACRQ9UHK6 382 aa12.36□□□□□ -0.43
MSH5-209ENST00000450148 LCMT1Q9UIC8 334 aa12.36□□□□□ -0.43
MSH5-209ENST00000450148 A0A0J9YYE9 177 aa12.35□□□□□ -0.43
MSH5-209ENST00000450148 A0A1W2PQM1 296 aa12.35□□□□□ -0.43
MSH5-209ENST00000450148 PRSS38A1L453 326 aa12.35□□□□□ -0.43
MSH5-209ENST00000450148 PMS2P1A4D2B8 440 aa12.35□□□□□ -0.43
MSH5-209ENST00000450148 ZNF487B1APH4 448 aa12.35□□□□□ -0.43
MSH5-209ENST00000450148 AKR1B10O60218 316 aa12.35□□□□□ -0.43
MSH5-209ENST00000450148 TRBC1P01850 177 aa12.35□□□□□ -0.43
MSH5-209ENST00000450148 CEACAM5P06731 702 aa12.35□□□□□ -0.43
MSH5-209ENST00000450148 TEAD1P28347 426 aa12.35□□□□□ -0.43
MSH5-209ENST00000450148 ACTN2P35609 894 aa12.35□□□□□ -0.43
MSH5-209ENST00000450148 GABREP78334 506 aa12.35□□□□□ -0.43
MSH5-209ENST00000450148 CDK3Q00526 305 aa12.35□□□□□ -0.43
MSH5-209ENST00000450148 PTSQ03393 145 aa12.35□□□□□ -0.43
MSH5-209ENST00000450148 DPTQ07507 201 aa12.35□□□□□ -0.43
MSH5-209ENST00000450148 TCEAL1Q15170 157 aa12.35□□□□□ -0.43
MSH5-209ENST00000450148 DENND2CQ68D51 928 aa12.35□□□□□ -0.43
MSH5-209ENST00000450148 SLC9A4Q6AI14 798 aa12.35□□□□□ -0.43
MSH5-209ENST00000450148 TIGD7Q6NT04 549 aaPredicted RBP12.35□□□□□ -0.43
MSH5-209ENST00000450148 IGF2-ASQ6U949 168 aa12.35□□□□□ -0.43
MSH5-209ENST00000450148 RBM44Q6ZP01 1051 aaKnown RBP12.35□□□□□ -0.43
MSH5-209ENST00000450148 HEATR4Q86WZ0 1026 aa12.35□□□□□ -0.43
MSH5-209ENST00000450148 VSIG1Q86XK7 387 aa12.35□□□□□ -0.43
MSH5-209ENST00000450148 NRROSQ86YC3 692 aa12.35□□□□□ -0.43
MSH5-209ENST00000450148 MAP7D3Q8IWC1 876 aa12.35□□□□□ -0.43
MSH5-209ENST00000450148 PAF1Q8N7H5 531 aa12.35□□□□□ -0.43
MSH5-209ENST00000450148 CCDC74AQ96AQ1 378 aa12.35□□□□□ -0.43
MSH5-209ENST00000450148 ATXN7L3BQ96GX2 97 aa12.35□□□□□ -0.43
MSH5-209ENST00000450148 TDRD1Q9BXT4 1180 aaKnown RBP12.35□□□□□ -0.43
MSH5-209ENST00000450148 DEF6Q9H4E7 631 aa12.35□□□□□ -0.43
MSH5-209ENST00000450148 RBM22Q9NW64 420 aaKnown RBP eCLIP12.35□□□□□ -0.43
MSH5-209ENST00000450148 GULP1Q9UBP9 304 aa12.35□□□□□ -0.43
MSH5-209ENST00000450148 GPR34Q9UPC5 381 aa12.35□□□□□ -0.43
MSH5-209ENST00000450148 DOLKQ9UPQ8 538 aa12.35□□□□□ -0.43
MSH5-209ENST00000450148 ST14Q9Y5Y6 855 aa12.35□□□□□ -0.43
MSH5-209ENST00000450148 MMP2P08253 660 aa12.34□□□□□ -0.43
MSH5-209ENST00000450148 CCNB1P14635 433 aa12.34□□□□□ -0.43
MSH5-209ENST00000450148 CES1P23141 567 aa12.34□□□□□ -0.43
MSH5-209ENST00000450148 KELP23276 732 aa12.34□□□□□ -0.43
MSH5-209ENST00000450148 ARHGAP25P42331 645 aa12.34□□□□□ -0.43
MSH5-209ENST00000450148 ABCG1P45844 678 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms