RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 MAP1AP78559 2803 aaPredicted RBP7.91□□□□□ -1.14
LINC01961-201ENST00000449954 SSU72P8A0A1W2PR75 194 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 C16orf96A6NNT2 1141 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 K7ERQ8 282 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 TULP2O00295 520 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 AREL1O15033 823 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 CLDN11O75508 207 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 HLA-DRAP01903 254 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 SNRPB2P08579 225 aaKnown RBP7.91□□□□□ -1.14
LINC01961-201ENST00000449954 STSP08842 583 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 NFKB1P19838 968 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 BMP6P22004 513 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 KELP23276 732 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 MPSTP25325 297 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 HTR1EP28566 365 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 ART1P52961 327 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 CHAF1BQ13112 559 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 PEX6Q13608 980 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 DNASE1L3Q13609 305 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 RAPGEF1Q13905 1077 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 LRRC14Q15048 493 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 KLHL40Q2TBA0 621 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 ZNF805Q5CZA5 627 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 RRAGBQ5VZM2 374 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 EPM2AIP1Q7L775 607 aaPredicted RBP7.91□□□□□ -1.14
LINC01961-201ENST00000449954 ARHGAP22Q7Z5H3 698 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 PCDH20Q8N6Y1 951 aaKnown RBP7.91□□□□□ -1.14
LINC01961-201ENST00000449954 ATP6V0D2Q8N8Y2 350 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 SLC4A11Q8NBS3 891 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 CCDC150Q8NCX0 1101 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 OR56A4Q8NGH8 313 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 OR52K2Q8NGK3 314 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 ZNF507Q8TCN5 953 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 CXorf40AQ8TE69 158 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 RPRD1AQ96P16 312 aaPredicted RBP7.91□□□□□ -1.14
LINC01961-201ENST00000449954 PRMT1Q99873 361 aaKnown RBP7.91□□□□□ -1.14
LINC01961-201ENST00000449954 APOOQ9BUR5 198 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 TRIM62Q9BVG3 475 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 TNKS2Q9H2K2 1166 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 ACTL8Q9H568 366 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 TMEM9Q9P0T7 183 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 SLC12A6Q9UHW9 1150 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 VPS51Q9UID3 782 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 TSPAN16Q9UKR8 245 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 OSGIN2Q9Y236 505 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 TBC1D30Q9Y2I9 924 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 CHD5Q8TDI0 1954 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 ARHGEF17Q96PE2 2063 aaPredicted RBP7.91□□□□□ -1.14
LINC01961-201ENST00000449954 FN1P02751 2386 aaKnown RBP7.91□□□□□ -1.14
LINC01961-201ENST00000449954 ACANP16112 2415 aa7.91□□□□□ -1.14
LINC01961-201ENST00000449954 ARGFXA6NJG6 315 aa7.9□□□□□ -1.14
LINC01961-201ENST00000449954 KCNU1A8MYU2 1149 aa7.9□□□□□ -1.14
LINC01961-201ENST00000449954 TNFRSF10CO14798 259 aa7.9□□□□□ -1.14
LINC01961-201ENST00000449954 IKBKBO14920 756 aa7.9□□□□□ -1.14
LINC01961-201ENST00000449954 KCNN4O15554 427 aa7.9□□□□□ -1.14
LINC01961-201ENST00000449954 SMAD6O43541 496 aaKnown RBP7.9□□□□□ -1.14
LINC01961-201ENST00000449954 FBXO21O94952 628 aa7.9□□□□□ -1.14
LINC01961-201ENST00000449954 MT-ND3P03897 115 aa7.9□□□□□ -1.14
LINC01961-201ENST00000449954 LCP1P13796 627 aa7.9□□□□□ -1.14
LINC01961-201ENST00000449954 CHRNA4P43681 627 aa7.9□□□□□ -1.14
LINC01961-201ENST00000449954 CCNHP51946 323 aaPredicted RBP7.9□□□□□ -1.14
LINC01961-201ENST00000449954 NDST2P52849 883 aa7.9□□□□□ -1.14
LINC01961-201ENST00000449954 KIAA1024LP59773 190 aa7.9□□□□□ -1.14
LINC01961-201ENST00000449954 MTA1Q13330 715 aa7.9□□□□□ -1.14
LINC01961-201ENST00000449954 MTM1Q13496 603 aa7.9□□□□□ -1.14
LINC01961-201ENST00000449954 ZNF235Q14590 738 aa7.9□□□□□ -1.14
LINC01961-201ENST00000449954 SWI5Q1ZZU3 235 aa7.9□□□□□ -1.14
LINC01961-201ENST00000449954 NKAIN2Q5VXU1 208 aa7.9□□□□□ -1.14
LINC01961-201ENST00000449954 DIEXFQ68CQ4 756 aaKnown RBP7.9□□□□□ -1.14
LINC01961-201ENST00000449954 MCTP1Q6DN14 999 aa7.9□□□□□ -1.14
LINC01961-201ENST00000449954 WDR74Q6RFH5 385 aaPredicted RBP7.9□□□□□ -1.14
LINC01961-201ENST00000449954 CXXC5Q7LFL8 322 aaKnown RBP7.9□□□□□ -1.14
LINC01961-201ENST00000449954 SYVN1Q86TM6 617 aa7.9□□□□□ -1.14
LINC01961-201ENST00000449954 FAM186BQ8IYM0 893 aa7.9□□□□□ -1.14
LINC01961-201ENST00000449954 CHDHQ8NE62 594 aaPredicted RBP7.9□□□□□ -1.14
LINC01961-201ENST00000449954 OR10G6Q8NH81 332 aa7.9□□□□□ -1.14
LINC01961-201ENST00000449954 GOLGA5Q8TBA6 731 aa7.9□□□□□ -1.14
LINC01961-201ENST00000449954 STK32AQ8WU08 396 aa7.9□□□□□ -1.14
LINC01961-201ENST00000449954 NUDT8Q8WV74 236 aa7.9□□□□□ -1.14
LINC01961-201ENST00000449954 CHTF18Q8WVB6 975 aa7.9□□□□□ -1.14
LINC01961-201ENST00000449954 OR1E3Q8WZA6 343 aa7.9□□□□□ -1.14
LINC01961-201ENST00000449954 AHCYL2Q96HN2 611 aaKnown RBP7.9□□□□□ -1.14
LINC01961-201ENST00000449954 PSMB7Q99436 277 aa7.9□□□□□ -1.14
LINC01961-201ENST00000449954 SMAD5Q99717 465 aaKnown RBP7.9□□□□□ -1.14
LINC01961-201ENST00000449954 ILKAPQ9H0C8 392 aaPredicted RBP7.9□□□□□ -1.14
LINC01961-201ENST00000449954 TMEM168Q9H0V1 697 aa7.9□□□□□ -1.14
LINC01961-201ENST00000449954 ZDHHC6Q9H6R6 413 aa7.9□□□□□ -1.14
LINC01961-201ENST00000449954 APOBEC3GQ9HC16 384 aaKnown RBP7.9□□□□□ -1.14
LINC01961-201ENST00000449954 DNAJB12Q9NXW2 375 aaKnown RBP7.9□□□□□ -1.14
LINC01961-201ENST00000449954 GPR83Q9NYM4 423 aa7.9□□□□□ -1.14
LINC01961-201ENST00000449954 C5AR2Q9P296 337 aa7.9□□□□□ -1.14
LINC01961-201ENST00000449954 OR1A2Q9Y585 309 aa7.9□□□□□ -1.14
LINC01961-201ENST00000449954 GTF3C3Q9Y5Q9 886 aa7.9□□□□□ -1.14
LINC01961-201ENST00000449954 GOLGA6L3A6NEY3 463 aa7.89□□□□□ -1.15
LINC01961-201ENST00000449954 CACNB4O00305 520 aaPredicted RBP7.89□□□□□ -1.15
LINC01961-201ENST00000449954 SART1O43290 800 aaKnown RBP7.89□□□□□ -1.15
LINC01961-201ENST00000449954 SNAP91O60641 907 aa7.89□□□□□ -1.15
LINC01961-201ENST00000449954 MMP20O60882 483 aa7.89□□□□□ -1.15
LINC01961-201ENST00000449954 ECEL1O95672 775 aa7.89□□□□□ -1.15
LINC01961-201ENST00000449954 SLC2A3P11169 496 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms