RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 MATN2O00339 956 aa16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 PEX11AO75192 247 aa16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 GLP2RO95838 553 aa16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 MT-CO1P00395 513 aa16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 GOT2P00505 430 aaKnown RBP16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 PDHA1P08559 390 aa16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 NCF2P19878 526 aaPredicted RBP16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 CDC25CP30307 473 aa16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 PGM1P36871 562 aa16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 RPL14P50914 215 aaKnown RBP16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 AGAP9Q5VTM2 703 aa16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 HTR3DQ70Z44 454 aa16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 MFN1Q8IWA4 741 aa16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 FAM217AQ8IXS0 508 aa16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 ARHGAP24Q8N264 748 aa16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 SHKBP1Q8TBC3 707 aa16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 SGF29Q96ES7 293 aa16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 GCNAQ96QF7 691 aa16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 NUDCD1Q96RS6 583 aa16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 RNPEPL1Q9HAU8 725 aa16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 VPS51Q9UID3 782 aa16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 FCF1Q9Y324 198 aaKnown RBP16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 PCDHGC4Q9Y5F7 938 aa16.13■□□□□ 0.17
AP000253.1-201ENST00000449339 TYW5A2RUC4 315 aaKnown RBP16.12■□□□□ 0.17
AP000253.1-201ENST00000449339 K7ERQ8 282 aa16.12■□□□□ 0.17
AP000253.1-201ENST00000449339 GRM6O15303 877 aa16.12■□□□□ 0.17
AP000253.1-201ENST00000449339 LTA4HP09960 611 aaKnown RBP16.12■□□□□ 0.17
AP000253.1-201ENST00000449339 CCDC166P0CW27 439 aa16.12■□□□□ 0.17
AP000253.1-201ENST00000449339 ASPHQ12797 758 aa16.12■□□□□ 0.17
AP000253.1-201ENST00000449339 PRKAA1Q13131 559 aa16.12■□□□□ 0.17
AP000253.1-201ENST00000449339 CAMK1Q14012 370 aa16.12■□□□□ 0.17
AP000253.1-201ENST00000449339 PTPRRQ15256 657 aa16.12■□□□□ 0.17
AP000253.1-201ENST00000449339 RIN3Q8TB24 985 aa16.12■□□□□ 0.17
AP000253.1-201ENST00000449339 SCG3Q8WXD2 468 aaKnown RBP16.12■□□□□ 0.17
AP000253.1-201ENST00000449339 ALG14Q96F25 216 aa16.12■□□□□ 0.17
AP000253.1-201ENST00000449339 UBXN10Q96LJ8 280 aa16.12■□□□□ 0.17
AP000253.1-201ENST00000449339 LZTS1Q9Y250 596 aa16.12■□□□□ 0.17
AP000253.1-201ENST00000449339 CRYL1Q9Y2S2 319 aa16.12■□□□□ 0.17
AP000253.1-201ENST00000449339 SPO11Q9Y5K1 396 aa16.12■□□□□ 0.17
AP000253.1-201ENST00000449339 HDAC3O15379 428 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 CD3EAPO15446 510 aaKnown RBP16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 RPP40O75818 363 aaKnown RBP16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 PRLP01236 227 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 EPCAMP16422 314 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 TFEBP19484 476 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 CDKN2DP55273 166 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 PREPLQ4J6C6 727 aaPredicted RBP16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 TECRLQ5HYJ1 363 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 GPR158Q5T848 1215 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 SEL1L3Q68CR1 1132 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 MRNIPQ6NTE8 343 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 KLC3Q6P597 504 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 LSMEM2Q8N112 164 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 CCNYL1Q8N7R7 359 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 TXNDC5Q8NBS9 432 aaKnown RBP16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 RMDN1Q96DB5 314 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 C1orf21Q9H246 121 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 EBF2Q9HAK2 575 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 NOP53Q9NZM5 478 aaKnown RBP16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 NCKIPSDQ9NZQ3 722 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 DNMT3BQ9UBC3 853 aaKnown RBP16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 LHX3Q9UBR4 397 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 NKX1-2Q9UD57 310 aaPredicted RBP16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 ZDHHC2Q9UIJ5 367 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 NOTCH4Q99466 2003 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 HELZP42694 1942 aaKnown RBP16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 CDH23Q9H251 3354 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 CCDC162PA2VCL2 907 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 E9PBE3 544 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 KLHL41O60662 606 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 ANP32DO95626 131 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 ATP5F1P24539 256 aaPredicted RBP16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 HK2P52789 917 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 NTHL1P78549 312 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 MXRA7P84157 204 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 TEAD2Q15562 447 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 DNAL1Q4LDG9 190 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 ATXN7L2Q5T6C5 722 aaPredicted RBP16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 ZNF697Q5TEC3 545 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 METTL21CQ5VZV1 264 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 FAM109BQ6ICB4 259 aaPredicted RBP16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 ZNF783Q6ZMS7 281 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 GPR150Q8NGU9 434 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 PDCD6IPQ8WUM4 868 aaKnown RBP16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 ANKRD49Q8WVL7 239 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 TDRD1Q9BXT4 1180 aaKnown RBP16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 SHCBP1LQ9BZQ2 653 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 POMKQ9H5K3 350 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 TCF7L2Q9NQB0 619 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 RIMKLBQ9ULI2 386 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 ARIH1Q9Y4X5 557 aaPredicted RBP16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 RAI2Q9Y5P3 530 aa16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.11■□□□□ 0.17
AP000253.1-201ENST00000449339 A0A0U1RQS6 177 aa16.1■□□□□ 0.17
AP000253.1-201ENST00000449339 NEMP2A6NFY4 417 aa16.1■□□□□ 0.17
AP000253.1-201ENST00000449339 PER2O15055 1255 aa16.1■□□□□ 0.17
AP000253.1-201ENST00000449339 DCXO43602 365 aa16.1■□□□□ 0.17
AP000253.1-201ENST00000449339 MAGEC1O60732 1142 aa16.1■□□□□ 0.17
AP000253.1-201ENST00000449339 MOSPD3O75425 235 aa16.1■□□□□ 0.17
AP000253.1-201ENST00000449339 CRTAMO95727 393 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms