RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 GDPD4Q6W3E5 623 aa12.53□□□□□ -0.4
SSR4-205ENST00000447375 TRIM69Q86WT6 500 aa12.53□□□□□ -0.4
SSR4-205ENST00000447375 JAMLQ86YT9 394 aa12.53□□□□□ -0.4
SSR4-205ENST00000447375 LRRC8AQ8IWT6 810 aa12.53□□□□□ -0.4
SSR4-205ENST00000447375 KATNAL2Q8IYT4 538 aa12.53□□□□□ -0.4
SSR4-205ENST00000447375 RCOR2Q8IZ40 523 aa12.53□□□□□ -0.4
SSR4-205ENST00000447375 ATPAF2Q8N5M1 289 aa12.53□□□□□ -0.4
SSR4-205ENST00000447375 LRRC57Q8N9N7 239 aa12.53□□□□□ -0.4
SSR4-205ENST00000447375 CCDC112Q8NEF3 446 aa12.53□□□□□ -0.4
SSR4-205ENST00000447375 KIAA1524Q8TCG1 905 aa12.53□□□□□ -0.4
SSR4-205ENST00000447375 RNF25Q96BH1 459 aaPredicted RBP12.53□□□□□ -0.4
SSR4-205ENST00000447375 TSGA13Q96PP4 275 aa12.53□□□□□ -0.4
SSR4-205ENST00000447375 MAK16Q9BXY0 300 aaKnown RBP12.53□□□□□ -0.4
SSR4-205ENST00000447375 PREBQ9HCU5 417 aa12.53□□□□□ -0.4
SSR4-205ENST00000447375 DKK3Q9UBP4 350 aa12.53□□□□□ -0.4
SSR4-205ENST00000447375 PCDHGA7Q9Y5G6 932 aa12.53□□□□□ -0.4
SSR4-205ENST00000447375 ADGRG1Q9Y653 693 aa12.53□□□□□ -0.4
SSR4-205ENST00000447375 NOTCH2Q04721 2471 aa12.53□□□□□ -0.4
SSR4-205ENST00000447375 A0A0U1RQJ8 604 aa12.52□□□□□ -0.41
SSR4-205ENST00000447375 PLD2O14939 933 aa12.52□□□□□ -0.41
SSR4-205ENST00000447375 MUSKO15146 869 aa12.52□□□□□ -0.41
SSR4-205ENST00000447375 INSIG1O15503 277 aa12.52□□□□□ -0.41
SSR4-205ENST00000447375 ZRANB2O95218 330 aaKnown RBP eCLIP12.52□□□□□ -0.41
SSR4-205ENST00000447375 KRT1P04264 644 aa12.52□□□□□ -0.41
SSR4-205ENST00000447375 UGT2B4P06133 528 aa12.52□□□□□ -0.41
SSR4-205ENST00000447375 ZFXP17010 805 aaPredicted RBP12.52□□□□□ -0.41
SSR4-205ENST00000447375 MX2P20592 715 aa12.52□□□□□ -0.41
SSR4-205ENST00000447375 CCNCP24863 283 aa12.52□□□□□ -0.41
SSR4-205ENST00000447375 CDKN2BP42772 138 aa12.52□□□□□ -0.41
SSR4-205ENST00000447375 RGRP47804 291 aa12.52□□□□□ -0.41
SSR4-205ENST00000447375 RENBPP51606 427 aa12.52□□□□□ -0.41
SSR4-205ENST00000447375 NEK3P51956 506 aa12.52□□□□□ -0.41
SSR4-205ENST00000447375 NAP1L1P55209 391 aaKnown RBP12.52□□□□□ -0.41
SSR4-205ENST00000447375 GBE1Q04446 702 aa12.52□□□□□ -0.41
SSR4-205ENST00000447375 GRM3Q14832 879 aa12.52□□□□□ -0.41
SSR4-205ENST00000447375 IFI16Q16666 785 aaKnown RBP12.52□□□□□ -0.41
SSR4-205ENST00000447375 ODF2Q5BJF6 829 aa12.52□□□□□ -0.41
SSR4-205ENST00000447375 ZNF542PQ5EBM4 170 aa12.52□□□□□ -0.41
SSR4-205ENST00000447375 MANEAQ5SRI9 462 aa12.52□□□□□ -0.41
SSR4-205ENST00000447375 MARC1Q5VT66 337 aa12.52□□□□□ -0.41
SSR4-205ENST00000447375 ZCCHC8Q6NZY4 707 aaKnown RBP12.52□□□□□ -0.41
SSR4-205ENST00000447375 MFSD7Q6UXD7 560 aa12.52□□□□□ -0.41
SSR4-205ENST00000447375 SRLQ86TD4 932 aa12.52□□□□□ -0.41
SSR4-205ENST00000447375 TEX26Q8N6G2 289 aa12.52□□□□□ -0.41
SSR4-205ENST00000447375 PLD5Q8N7P1 536 aa12.52□□□□□ -0.41
SSR4-205ENST00000447375 TMEM145Q8NBT3 493 aa12.52□□□□□ -0.41
SSR4-205ENST00000447375 HCAR2Q8TDS4 363 aa12.52□□□□□ -0.41
SSR4-205ENST00000447375 EXOC2Q96KP1 924 aa12.52□□□□□ -0.41
SSR4-205ENST00000447375 ZNF641Q96N77 438 aaPredicted RBP12.52□□□□□ -0.41
SSR4-205ENST00000447375 KLHL32Q96NJ5 620 aa12.52□□□□□ -0.41
SSR4-205ENST00000447375 TUBGCP5Q96RT8 1024 aa12.52□□□□□ -0.41
SSR4-205ENST00000447375 MYOCQ99972 504 aa12.52□□□□□ -0.41
SSR4-205ENST00000447375 CINPQ9BW66 212 aaPredicted RBP12.52□□□□□ -0.41
SSR4-205ENST00000447375 ADNPQ9H2P0 1102 aa12.52□□□□□ -0.41
SSR4-205ENST00000447375 DTLQ9NZJ0 730 aa12.52□□□□□ -0.41
SSR4-205ENST00000447375 NCKIPSDQ9NZQ3 722 aa12.52□□□□□ -0.41
SSR4-205ENST00000447375 SEPT10Q9P0V9 454 aa12.52□□□□□ -0.41
SSR4-205ENST00000447375 PLEKHB1Q9UF11 243 aaPredicted RBP12.52□□□□□ -0.41
SSR4-205ENST00000447375 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.52□□□□□ -0.41
SSR4-205ENST00000447375 PCDHGA4Q9Y5G9 962 aa12.52□□□□□ -0.41
SSR4-205ENST00000447375 PCDHA3Q9Y5H8 950 aa12.52□□□□□ -0.41
SSR4-205ENST00000447375 SPTAN1Q13813 2472 aaKnown RBP12.52□□□□□ -0.41
SSR4-205ENST00000447375 LRRK1Q38SD2 2015 aa12.52□□□□□ -0.41
SSR4-205ENST00000447375 GRID2IPA4D2P6 1211 aa12.51□□□□□ -0.41
SSR4-205ENST00000447375 EME2A4GXA9 379 aaPredicted RBP12.51□□□□□ -0.41
SSR4-205ENST00000447375 C16orf96A6NNT2 1141 aa12.51□□□□□ -0.41
SSR4-205ENST00000447375 RIOK3O14730 519 aaKnown RBP12.51□□□□□ -0.41
SSR4-205ENST00000447375 APOL1O14791 398 aa12.51□□□□□ -0.41
SSR4-205ENST00000447375 SLC31A1O15431 190 aa12.51□□□□□ -0.41
SSR4-205ENST00000447375 AP1G1O43747 822 aa12.51□□□□□ -0.41
SSR4-205ENST00000447375 LIPCP11150 499 aa12.51□□□□□ -0.41
SSR4-205ENST00000447375 ADRB3P13945 408 aa12.51□□□□□ -0.41
SSR4-205ENST00000447375 CTNNA1P35221 906 aaKnown RBP12.51□□□□□ -0.41
SSR4-205ENST00000447375 HSPA9P38646 679 aaKnown RBP12.51□□□□□ -0.41
SSR4-205ENST00000447375 CASRP41180 1078 aa12.51□□□□□ -0.41
SSR4-205ENST00000447375 MARCKSL1P49006 195 aa12.51□□□□□ -0.41
SSR4-205ENST00000447375 HNRNPKP61978 463 aaKnown RBP eCLIP12.51□□□□□ -0.41
SSR4-205ENST00000447375 SPOCD1Q6ZMY3 1216 aa12.51□□□□□ -0.41
SSR4-205ENST00000447375 PARS2Q7L3T8 475 aaKnown RBP12.51□□□□□ -0.41
SSR4-205ENST00000447375 FBXO39Q8N4B4 442 aa12.51□□□□□ -0.41
SSR4-205ENST00000447375 RNF10Q8N5U6 811 aaKnown RBP12.51□□□□□ -0.41
SSR4-205ENST00000447375 EXD1Q8NHP7 514 aa12.51□□□□□ -0.41
SSR4-205ENST00000447375 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.51□□□□□ -0.41
SSR4-205ENST00000447375 NSMCE1Q8WV22 266 aa12.51□□□□□ -0.41
SSR4-205ENST00000447375 MAML1Q92585 1016 aa12.51□□□□□ -0.41
SSR4-205ENST00000447375 KRT35Q92764 455 aa12.51□□□□□ -0.41
SSR4-205ENST00000447375 RAB7BQ96AH8 199 aa12.51□□□□□ -0.41
SSR4-205ENST00000447375 IFT43Q96FT9 208 aa12.51□□□□□ -0.41
SSR4-205ENST00000447375 SUV39H2Q9H5I1 410 aa12.51□□□□□ -0.41
SSR4-205ENST00000447375 DNAJC28Q9NX36 388 aa12.51□□□□□ -0.41
SSR4-205ENST00000447375 TRIM10Q9UDY6 481 aa12.51□□□□□ -0.41
SSR4-205ENST00000447375 ACSL6Q9UKU0 697 aa12.51□□□□□ -0.41
SSR4-205ENST00000447375 FADS3Q9Y5Q0 445 aa12.51□□□□□ -0.41
SSR4-205ENST00000447375 RP1P56715 2156 aa12.51□□□□□ -0.41
SSR4-205ENST00000447375 COL27A1Q8IZC6 1860 aaPredicted RBP12.51□□□□□ -0.41
SSR4-205ENST00000447375 TSPAN11A1L157 253 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 MACROD2A1Z1Q3 448 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 AREL1O15033 823 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 MATN3O15232 486 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 CASC3O15234 703 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms