RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 GSDMCQ9BYG8 508 aa7.11□□□□□ -1.27
LRRC28-203ENST00000447360 TTYH3Q9C0H2 523 aa7.11□□□□□ -1.27
LRRC28-203ENST00000447360 MRPL40Q9NQ50 206 aaKnown RBP7.11□□□□□ -1.27
LRRC28-203ENST00000447360 CASS4Q9NQ75 786 aa7.11□□□□□ -1.27
LRRC28-203ENST00000447360 SPATS2LQ9NUQ6 558 aaKnown RBP7.11□□□□□ -1.27
LRRC28-203ENST00000447360 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.11□□□□□ -1.27
LRRC28-203ENST00000447360 KIAA1468Q9P260 1216 aa7.11□□□□□ -1.27
LRRC28-203ENST00000447360 PPARGC1AQ9UBK2 798 aaKnown RBP7.11□□□□□ -1.27
LRRC28-203ENST00000447360 TLK1Q9UKI8 766 aa7.11□□□□□ -1.27
LRRC28-203ENST00000447360 STAP1Q9ULZ2 295 aa7.11□□□□□ -1.27
LRRC28-203ENST00000447360 COQ6Q9Y2Z9 468 aa7.11□□□□□ -1.27
LRRC28-203ENST00000447360 SNX10Q9Y5X0 201 aa7.11□□□□□ -1.27
LRRC28-203ENST00000447360 HIVEP3Q5T1R4 2406 aa7.11□□□□□ -1.27
LRRC28-203ENST00000447360 HIVEP1P15822 2718 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 PRSS38A1L453 326 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 ZSCAN5CA6NGD5 496 aaPredicted RBP7.1□□□□□ -1.27
LRRC28-203ENST00000447360 TCP11X1B4DZS4 312 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 PSMA7O14818 248 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 PPM1DO15297 605 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 INPP4BO15327 924 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 THAP12O43422 761 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 SORBS2O94875 1100 aaKnown RBP7.1□□□□□ -1.27
LRRC28-203ENST00000447360 DLGAP3O95886 979 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 LDLRP01130 860 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 MPSTP25325 297 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 CSF2RBP32927 897 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 ACVRL1P37023 503 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 PPP1R2P41236 205 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 STX17P56962 302 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 DEUP1Q05D60 604 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 ILF3Q12906 894 aaKnown RBP eCLIP7.1□□□□□ -1.27
LRRC28-203ENST00000447360 UGP2Q16851 508 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 EIF2S3LQ2VIR3 472 aaKnown RBP7.1□□□□□ -1.27
LRRC28-203ENST00000447360 SLC25A52Q3SY17 297 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 INO80DQ53TQ3 878 aaPredicted RBP7.1□□□□□ -1.27
LRRC28-203ENST00000447360 ATXN7L2Q5T6C5 722 aaPredicted RBP7.1□□□□□ -1.27
LRRC28-203ENST00000447360 NKAIN2Q5VXU1 208 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 DESI1Q6ICB0 168 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 KLHL10Q6JEL2 608 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 CLEC17AQ6ZS10 378 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 FAM183BPQ6ZVS7 135 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 NRROSQ86YC3 692 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 APLFQ8IW19 511 aaPredicted RBP7.1□□□□□ -1.27
LRRC28-203ENST00000447360 ARHGEF19Q8IW93 802 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 DRC7Q8IY82 874 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 PLA2G15Q8NCC3 412 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 C1orf131Q8NDD1 294 aaKnown RBP7.1□□□□□ -1.27
LRRC28-203ENST00000447360 EHBP1Q8NDI1 1231 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 EPS8L1Q8TE68 723 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 NELFBQ8WX92 580 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 CASKIN2Q8WXE0 1202 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 ZNF592Q92610 1267 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 CEP63Q96MT8 703 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 SLC29A3Q9BZD2 475 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 MAGEH1Q9H213 219 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 PCDH12Q9NPG4 1184 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 TRNAU1APQ9NX07 287 aaKnown RBP7.1□□□□□ -1.27
LRRC28-203ENST00000447360 TAAR2Q9P1P5 351 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 RPS6KL1Q9Y6S9 549 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 TACC2O95359 2948 aa7.1□□□□□ -1.27
LRRC28-203ENST00000447360 TSPAN11A1L157 253 aa7.09□□□□□ -1.27
LRRC28-203ENST00000447360 POLR1CO15160 346 aaPredicted RBP7.09□□□□□ -1.27
LRRC28-203ENST00000447360 KDELR3O43731 214 aa7.09□□□□□ -1.27
LRRC28-203ENST00000447360 RECQL5O94762 991 aaPredicted RBP7.09□□□□□ -1.27
LRRC28-203ENST00000447360 TMCC1O94876 653 aa7.09□□□□□ -1.27
LRRC28-203ENST00000447360 IGSF6O95976 241 aa7.09□□□□□ -1.27
LRRC28-203ENST00000447360 PDGFAP04085 211 aa7.09□□□□□ -1.27
LRRC28-203ENST00000447360 ERBB2P04626 1255 aa7.09□□□□□ -1.27
LRRC28-203ENST00000447360 FURINP09958 794 aa7.09□□□□□ -1.27
LRRC28-203ENST00000447360 TFE3P19532 575 aaPredicted RBP7.09□□□□□ -1.27
LRRC28-203ENST00000447360 F8A1P23610 371 aa7.09□□□□□ -1.27
LRRC28-203ENST00000447360 DLSTP36957 453 aa7.09□□□□□ -1.27
LRRC28-203ENST00000447360 MMP12P39900 470 aa7.09□□□□□ -1.27
LRRC28-203ENST00000447360 MAPKAPK2P49137 400 aa7.09□□□□□ -1.27
LRRC28-203ENST00000447360 SULT1E1P49888 294 aa7.09□□□□□ -1.27
LRRC28-203ENST00000447360 MARSP56192 900 aaKnown RBP7.09□□□□□ -1.27
LRRC28-203ENST00000447360 STIM1Q13586 685 aa7.09□□□□□ -1.27
LRRC28-203ENST00000447360 SEMA5AQ13591 1074 aa7.09□□□□□ -1.27
LRRC28-203ENST00000447360 ERV3-1Q14264 604 aa7.09□□□□□ -1.27
LRRC28-203ENST00000447360 GRM3Q14832 879 aa7.09□□□□□ -1.27
LRRC28-203ENST00000447360 NR6A1Q15406 480 aa7.09□□□□□ -1.27
LRRC28-203ENST00000447360 INPP5JQ15735 1006 aaPredicted RBP7.09□□□□□ -1.27
LRRC28-203ENST00000447360 BRAT1Q6PJG6 821 aa7.09□□□□□ -1.27
LRRC28-203ENST00000447360 WDR74Q6RFH5 385 aaPredicted RBP7.09□□□□□ -1.27
LRRC28-203ENST00000447360 ENOSF1Q7L5Y1 443 aa7.09□□□□□ -1.27
LRRC28-203ENST00000447360 ARHGAP22Q7Z5H3 698 aa7.09□□□□□ -1.27
LRRC28-203ENST00000447360 TRIM59Q8IWR1 403 aa7.09□□□□□ -1.27
LRRC28-203ENST00000447360 NAGSQ8N159 534 aa7.09□□□□□ -1.27
LRRC28-203ENST00000447360 AHCYL2Q96HN2 611 aaKnown RBP7.09□□□□□ -1.27
LRRC28-203ENST00000447360 ZNF641Q96N77 438 aaPredicted RBP7.09□□□□□ -1.27
LRRC28-203ENST00000447360 CTRCQ99895 268 aa7.09□□□□□ -1.27
LRRC28-203ENST00000447360 LGR4Q9BXB1 951 aa7.09□□□□□ -1.27
LRRC28-203ENST00000447360 SUV39H2Q9H5I1 410 aa7.09□□□□□ -1.27
LRRC28-203ENST00000447360 SYNCQ9H7C4 482 aa7.09□□□□□ -1.27
LRRC28-203ENST00000447360 WDR26Q9H7D7 661 aa7.09□□□□□ -1.27
LRRC28-203ENST00000447360 CARS2Q9HA77 564 aaKnown RBP7.09□□□□□ -1.27
LRRC28-203ENST00000447360 MLXIPLQ9NP71 852 aa7.09□□□□□ -1.27
LRRC28-203ENST00000447360 ACP6Q9NPH0 428 aa7.09□□□□□ -1.27
LRRC28-203ENST00000447360 LMBRD1Q9NUN5 540 aa7.09□□□□□ -1.27
LRRC28-203ENST00000447360 TMEM9Q9P0T7 183 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms