RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 EFHBQ8N7U6 833 aa17.46■□□□□ 0.39
SMC6-206ENST00000446852 SCG3Q8WXD2 468 aaKnown RBP17.46■□□□□ 0.39
SMC6-206ENST00000446852 SLC46A2Q9BY10 475 aa17.46■□□□□ 0.39
SMC6-206ENST00000446852 POLR3BQ9NW08 1133 aaPredicted RBP17.46■□□□□ 0.39
SMC6-206ENST00000446852 ZDHHC2Q9UIJ5 367 aa17.46■□□□□ 0.39
SMC6-206ENST00000446852 CDH23Q9H251 3354 aa17.46■□□□□ 0.39
SMC6-206ENST00000446852 SCN8AQ9UQD0 1980 aa17.46■□□□□ 0.39
SMC6-206ENST00000446852 TRAV19A0A0A6YYK7 116 aa17.46■□□□□ 0.39
SMC6-206ENST00000446852 C2orf81A6NN90 581 aa17.46■□□□□ 0.39
SMC6-206ENST00000446852 MATN2O00339 956 aa17.46■□□□□ 0.39
SMC6-206ENST00000446852 GSC2O15499 205 aa17.46■□□□□ 0.39
SMC6-206ENST00000446852 SMAD6O43541 496 aaKnown RBP17.46■□□□□ 0.39
SMC6-206ENST00000446852 ATP5F1P24539 256 aaPredicted RBP17.46■□□□□ 0.39
SMC6-206ENST00000446852 KDSRQ06136 332 aa17.46■□□□□ 0.39
SMC6-206ENST00000446852 CFAP157Q5JU67 520 aa17.46■□□□□ 0.39
SMC6-206ENST00000446852 TPGS1Q6ZTW0 290 aa17.46■□□□□ 0.39
SMC6-206ENST00000446852 CPXM2Q8N436 756 aa17.46■□□□□ 0.39
SMC6-206ENST00000446852 CCNYL1Q8N7R7 359 aa17.46■□□□□ 0.39
SMC6-206ENST00000446852 BADQ92934 168 aa17.46■□□□□ 0.39
SMC6-206ENST00000446852 SORCS3Q9UPU3 1222 aa17.46■□□□□ 0.39
SMC6-206ENST00000446852 NOTCH4Q99466 2003 aa17.46■□□□□ 0.39
SMC6-206ENST00000446852 GYG2O15488 501 aa17.45■□□□□ 0.38
SMC6-206ENST00000446852 BMP1P13497 986 aa17.45■□□□□ 0.38
SMC6-206ENST00000446852 AOC1P19801 751 aa17.45■□□□□ 0.38
SMC6-206ENST00000446852 CDC25CP30307 473 aa17.45■□□□□ 0.38
SMC6-206ENST00000446852 CDKN1CP49918 316 aaPredicted RBP17.45■□□□□ 0.38
SMC6-206ENST00000446852 RPL14P50914 215 aaKnown RBP17.45■□□□□ 0.38
SMC6-206ENST00000446852 ACAP2Q15057 778 aa17.45■□□□□ 0.38
SMC6-206ENST00000446852 TBCCQ15814 346 aa17.45■□□□□ 0.38
SMC6-206ENST00000446852 AFTPHQ6ULP2 937 aa17.45■□□□□ 0.38
SMC6-206ENST00000446852 SDCCAG8Q86SQ7 713 aaPredicted RBP17.45■□□□□ 0.38
SMC6-206ENST00000446852 TEX9Q8N6V9 391 aa17.45■□□□□ 0.38
SMC6-206ENST00000446852 TM6SF2Q9BZW4 377 aa17.45■□□□□ 0.38
SMC6-206ENST00000446852 CYP4F12Q9HCS2 524 aa17.45■□□□□ 0.38
SMC6-206ENST00000446852 TAGLN3Q9UI15 199 aa17.45■□□□□ 0.38
SMC6-206ENST00000446852 CORO1CQ9ULV4 474 aaPredicted RBP17.45■□□□□ 0.38
SMC6-206ENST00000446852 PCDHB9Q9Y5E1 797 aa17.45■□□□□ 0.38
SMC6-206ENST00000446852 A8MT66 165 aa17.45■□□□□ 0.38
SMC6-206ENST00000446852 LEFTY2O00292 366 aa17.45■□□□□ 0.38
SMC6-206ENST00000446852 FZD6O60353 706 aa17.45■□□□□ 0.38
SMC6-206ENST00000446852 TFEBP19484 476 aa17.45■□□□□ 0.38
SMC6-206ENST00000446852 LPOP22079 712 aaPredicted RBP17.45■□□□□ 0.38
SMC6-206ENST00000446852 PMLP29590 882 aa17.45■□□□□ 0.38
SMC6-206ENST00000446852 DNAJB13P59910 316 aa17.45■□□□□ 0.38
SMC6-206ENST00000446852 PRKAA1Q13131 559 aa17.45■□□□□ 0.38
SMC6-206ENST00000446852 PLPP4Q5VZY2 271 aa17.45■□□□□ 0.38
SMC6-206ENST00000446852 KLC3Q6P597 504 aa17.45■□□□□ 0.38
SMC6-206ENST00000446852 TRIM67Q6ZTA4 783 aa17.45■□□□□ 0.38
SMC6-206ENST00000446852 ELMOD1Q8N336 334 aa17.45■□□□□ 0.38
SMC6-206ENST00000446852 TTC30BQ8N4P2 665 aa17.45■□□□□ 0.38
SMC6-206ENST00000446852 OR6K2Q8NGY2 324 aa17.45■□□□□ 0.38
SMC6-206ENST00000446852 FAM136AQ96C01 138 aa17.45■□□□□ 0.38
SMC6-206ENST00000446852 OR52B2Q96RD2 323 aa17.45■□□□□ 0.38
SMC6-206ENST00000446852 C2orf49Q9BVC5 232 aaPredicted RBP17.45■□□□□ 0.38
SMC6-206ENST00000446852 ASAH2Q9NR71 780 aa17.45■□□□□ 0.38
SMC6-206ENST00000446852 FKBPLQ9UIM3 349 aa17.45■□□□□ 0.38
SMC6-206ENST00000446852 CCL26Q9Y258 94 aa17.45■□□□□ 0.38
SMC6-206ENST00000446852 GRID2O43424 1007 aa17.44■□□□□ 0.38
SMC6-206ENST00000446852 PRAMEF12O95522 483 aa17.44■□□□□ 0.38
SMC6-206ENST00000446852 GLUD1P00367 558 aa17.44■□□□□ 0.38
SMC6-206ENST00000446852 SLC26A3P40879 764 aa17.44■□□□□ 0.38
SMC6-206ENST00000446852 KCNC1P48547 511 aa17.44■□□□□ 0.38
SMC6-206ENST00000446852 SUOXP51687 545 aa17.44■□□□□ 0.38
SMC6-206ENST00000446852 LMAN2Q12907 356 aa17.44■□□□□ 0.38
SMC6-206ENST00000446852 ISCA2Q86U28 154 aa17.44■□□□□ 0.38
SMC6-206ENST00000446852 SUGP1Q8IWZ8 645 aaKnown RBP17.44■□□□□ 0.38
SMC6-206ENST00000446852 AGAP11Q8TF27 550 aa17.44■□□□□ 0.38
SMC6-206ENST00000446852 LPGAT1Q92604 370 aa17.44■□□□□ 0.38
SMC6-206ENST00000446852 AARSD1Q9BTE6 412 aaKnown RBP17.44■□□□□ 0.38
SMC6-206ENST00000446852 ALG9Q9H6U8 611 aa17.44■□□□□ 0.38
SMC6-206ENST00000446852 BPIFA1Q9NP55 256 aa17.44■□□□□ 0.38
SMC6-206ENST00000446852 INTS10Q9NVR2 710 aaKnown RBP17.44■□□□□ 0.38
SMC6-206ENST00000446852 IRAK3Q9Y616 596 aa17.44■□□□□ 0.38
SMC6-206ENST00000446852 B2RBV5 119 aa17.44■□□□□ 0.38
SMC6-206ENST00000446852 HDAC3O15379 428 aa17.44■□□□□ 0.38
SMC6-206ENST00000446852 NPHS1O60500 1241 aa17.44■□□□□ 0.38
SMC6-206ENST00000446852 JUNP05412 331 aaKnown RBP17.44■□□□□ 0.38
SMC6-206ENST00000446852 RBP1P09455 135 aa17.44■□□□□ 0.38
SMC6-206ENST00000446852 HSPA8P11142 646 aaKnown RBP17.44■□□□□ 0.38
SMC6-206ENST00000446852 GM2AP17900 193 aa17.44■□□□□ 0.38
SMC6-206ENST00000446852 CD70P32970 193 aa17.44■□□□□ 0.38
SMC6-206ENST00000446852 PLK1P53350 603 aa17.44■□□□□ 0.38
SMC6-206ENST00000446852 ASPHQ12797 758 aa17.44■□□□□ 0.38
SMC6-206ENST00000446852 PPIGQ13427 754 aaKnown RBP eCLIP17.44■□□□□ 0.382e-6■■□□□ 13.4
SMC6-206ENST00000446852 PIWIL4Q7Z3Z4 852 aaKnown RBP17.44■□□□□ 0.38
SMC6-206ENST00000446852 PIANPQ8IYJ0 282 aa17.44■□□□□ 0.38
SMC6-206ENST00000446852 RBM15BQ8NDT2 890 aaKnown RBP17.44■□□□□ 0.38
SMC6-206ENST00000446852 RIN3Q8TB24 985 aa17.44■□□□□ 0.38
SMC6-206ENST00000446852 PTERQ96BW5 349 aa17.44■□□□□ 0.38
SMC6-206ENST00000446852 GCNAQ96QF7 691 aa17.44■□□□□ 0.38
SMC6-206ENST00000446852 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.44■□□□□ 0.38
SMC6-206ENST00000446852 NCKIPSDQ9NZQ3 722 aa17.44■□□□□ 0.38
SMC6-206ENST00000446852 ZNF510Q9Y2H8 683 aa17.44■□□□□ 0.38
SMC6-206ENST00000446852 MED16Q9Y2X0 877 aa17.44■□□□□ 0.38
SMC6-206ENST00000446852 UBA6A0AVT1 1052 aaPredicted RBP17.43■□□□□ 0.38
SMC6-206ENST00000446852 E9PBE3 544 aa17.43■□□□□ 0.38
SMC6-206ENST00000446852 ZBTB14O43829 449 aa17.43■□□□□ 0.38
SMC6-206ENST00000446852 KLHL41O60662 606 aa17.43■□□□□ 0.38
SMC6-206ENST00000446852 ZNF37AP17032 561 aaPredicted RBP17.43■□□□□ 0.38
SMC6-206ENST00000446852 FPGSQ05932 587 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms