RNA–Protein interactions for RNA: ENST00000446579.1

LINC00440-201, long intergenic non-protein coding RNA 440, humanhuman

TSL 5 BASIC

Gene LINC00440, Length 734 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00440-201ENST00000446579 GJC3Q8NFK1 279 aa4.86□□□□□ -1.63
LINC00440-201ENST00000446579 RASSF8Q8NHQ8 419 aa4.86□□□□□ -1.63
LINC00440-201ENST00000446579 OSR1Q8TAX0 266 aaPredicted RBP4.86□□□□□ -1.63
LINC00440-201ENST00000446579 RPL36ALQ969Q0 106 aaKnown RBP4.86□□□□□ -1.63
LINC00440-201ENST00000446579 FBXL8Q96CD0 374 aa4.86□□□□□ -1.63
LINC00440-201ENST00000446579 ZNF653Q96CK0 615 aa4.86□□□□□ -1.63
LINC00440-201ENST00000446579 TMCO6Q96DC7 493 aa4.86□□□□□ -1.63
LINC00440-201ENST00000446579 SPATA17Q96L03 361 aa4.86□□□□□ -1.63
LINC00440-201ENST00000446579 TMEM47Q9BQJ4 181 aa4.86□□□□□ -1.63
LINC00440-201ENST00000446579 SH2D3AQ9BRG2 576 aa4.86□□□□□ -1.63
LINC00440-201ENST00000446579 KIFC3Q9BVG8 833 aa4.86□□□□□ -1.63
LINC00440-201ENST00000446579 PRSS22Q9GZN4 317 aa4.86□□□□□ -1.63
LINC00440-201ENST00000446579 CDT1Q9H211 546 aa4.86□□□□□ -1.63
LINC00440-201ENST00000446579 HRH4Q9H3N8 390 aa4.86□□□□□ -1.63
LINC00440-201ENST00000446579 ZWILCHQ9H900 591 aa4.86□□□□□ -1.63
LINC00440-201ENST00000446579 MAGEE1Q9HCI5 957 aa4.86□□□□□ -1.63
LINC00440-201ENST00000446579 PNRC2Q9NPJ4 139 aaKnown RBP4.86□□□□□ -1.63
LINC00440-201ENST00000446579 PAPOLBQ9NRJ5 636 aaKnown RBP4.86□□□□□ -1.63
LINC00440-201ENST00000446579 ANKRD10Q9NXR5 420 aa4.86□□□□□ -1.63
LINC00440-201ENST00000446579 PSD3Q9NYI0 1048 aa4.86□□□□□ -1.63
LINC00440-201ENST00000446579 CMAHPQ9Y471 501 aa4.86□□□□□ -1.63
LINC00440-201ENST00000446579 TRPV2Q9Y5S1 764 aa4.86□□□□□ -1.63
LINC00440-201ENST00000446579 CEPT1Q9Y6K0 416 aa4.86□□□□□ -1.63
LINC00440-201ENST00000446579 MAU2Q9Y6X3 613 aa4.86□□□□□ -1.63
LINC00440-201ENST00000446579 LOC102723996A0A087X1L8 192 aa4.85□□□□□ -1.63
LINC00440-201ENST00000446579 SMIM35A0A1B0GVV1 85 aa4.85□□□□□ -1.63
LINC00440-201ENST00000446579 hCG_1809904A0A1W2PP81 198 aa4.85□□□□□ -1.63
LINC00440-201ENST00000446579 A0A1W2PPE2 198 aa4.85□□□□□ -1.63
LINC00440-201ENST00000446579 A0A1W2PR64 198 aa4.85□□□□□ -1.63
LINC00440-201ENST00000446579 TBCAO75347 108 aaKnown RBP4.85□□□□□ -1.63
LINC00440-201ENST00000446579 BMP15O95972 392 aa4.85□□□□□ -1.63
LINC00440-201ENST00000446579 MMP2P08253 660 aa4.85□□□□□ -1.63
LINC00440-201ENST00000446579 MYZAPP0CAP1 466 aa4.85□□□□□ -1.63
LINC00440-201ENST00000446579 IL7RP16871 459 aa4.85□□□□□ -1.63
LINC00440-201ENST00000446579 CAPZA2P47755 286 aa4.85□□□□□ -1.63
LINC00440-201ENST00000446579 LIG4P49917 911 aa4.85□□□□□ -1.63
LINC00440-201ENST00000446579 FAM27E3Q08E93 113 aa4.85□□□□□ -1.63
LINC00440-201ENST00000446579 GRAPQ13588 217 aa4.85□□□□□ -1.63
LINC00440-201ENST00000446579 DAZAP2Q15038 168 aaPredicted RBP4.85□□□□□ -1.63
LINC00440-201ENST00000446579 NAB2Q15742 525 aa4.85□□□□□ -1.63
LINC00440-201ENST00000446579 SUPT20HL1Q3ZLR7 823 aa4.85□□□□□ -1.63
LINC00440-201ENST00000446579 CRY2Q49AN0 593 aa4.85□□□□□ -1.63
LINC00440-201ENST00000446579 ESCO2Q56NI9 601 aa4.85□□□□□ -1.63
LINC00440-201ENST00000446579 ZNF628Q5EBL2 1059 aa4.85□□□□□ -1.63
LINC00440-201ENST00000446579 ENTPD8Q5MY95 495 aa4.85□□□□□ -1.63
LINC00440-201ENST00000446579 RARS2Q5T160 578 aaKnown RBP4.85□□□□□ -1.63
LINC00440-201ENST00000446579 LCTLQ6UWM7 567 aa4.85□□□□□ -1.63
LINC00440-201ENST00000446579 LINGO2Q7L985 606 aa4.85□□□□□ -1.63
LINC00440-201ENST00000446579 WDR63Q8IWG1 891 aa4.85□□□□□ -1.63
LINC00440-201ENST00000446579 SLC35F3Q8IY50 421 aa4.85□□□□□ -1.63
LINC00440-201ENST00000446579 ZCCHC9Q8N567 271 aaKnown RBP4.85□□□□□ -1.63
LINC00440-201ENST00000446579 KDM1BQ8NB78 822 aa4.85□□□□□ -1.63
LINC00440-201ENST00000446579 CMASQ8NFW8 434 aaPredicted RBP4.85□□□□□ -1.63
LINC00440-201ENST00000446579 HUS1BQ8NHY5 278 aa4.85□□□□□ -1.63
LINC00440-201ENST00000446579 ZNF622Q969S3 477 aaKnown RBP eCLIP4.85□□□□□ -1.63
LINC00440-201ENST00000446579 ZBTB9Q96C00 473 aa4.85□□□□□ -1.63
LINC00440-201ENST00000446579 CEP295NLQ96MC4 621 aa4.85□□□□□ -1.63
LINC00440-201ENST00000446579 DGAT2Q96PD7 388 aa4.85□□□□□ -1.63
LINC00440-201ENST00000446579 DENND2DQ9H6A0 471 aaPredicted RBP4.85□□□□□ -1.63
LINC00440-201ENST00000446579 MVB12BQ9H7P6 319 aa4.85□□□□□ -1.63
LINC00440-201ENST00000446579 BPIFA1Q9NP55 256 aa4.85□□□□□ -1.63
LINC00440-201ENST00000446579 DDX4Q9NQI0 724 aaKnown RBP4.85□□□□□ -1.63
LINC00440-201ENST00000446579 PLEKHB1Q9UF11 243 aaPredicted RBP4.85□□□□□ -1.63
LINC00440-201ENST00000446579 UTS2RQ9UKP6 389 aa4.85□□□□□ -1.63
LINC00440-201ENST00000446579 AGO2Q9UKV8 859 aaKnown RBP4.85□□□□□ -1.63
LINC00440-201ENST00000446579 SLC4A4Q9Y6R1 1079 aa4.85□□□□□ -1.63
LINC00440-201ENST00000446579 A0A1B0GVM2 712 aa4.84□□□□□ -1.63
LINC00440-201ENST00000446579 TCRBV21S2A2A0A5A6 115 aa4.84□□□□□ -1.63
LINC00440-201ENST00000446579 TYW5A2RUC4 315 aaKnown RBP4.84□□□□□ -1.63
LINC00440-201ENST00000446579 HSPB6O14558 160 aa4.84□□□□□ -1.63
LINC00440-201ENST00000446579 ABCB1P08183 1280 aaPredicted RBP4.84□□□□□ -1.63
LINC00440-201ENST00000446579 MMP3P08254 477 aa4.84□□□□□ -1.63
LINC00440-201ENST00000446579 MYBL1P10243 752 aa4.84□□□□□ -1.63
LINC00440-201ENST00000446579 ETFAP13804 333 aa4.84□□□□□ -1.63
LINC00440-201ENST00000446579 DCTDP32321 178 aa4.84□□□□□ -1.63
LINC00440-201ENST00000446579 CTNNA1P35221 906 aaKnown RBP4.84□□□□□ -1.63
LINC00440-201ENST00000446579 CXCL9Q07325 125 aa4.84□□□□□ -1.63
LINC00440-201ENST00000446579 SNTB1Q13884 538 aaKnown RBP4.84□□□□□ -1.63
LINC00440-201ENST00000446579 SOWAHAQ2M3V2 549 aa4.84□□□□□ -1.63
LINC00440-201ENST00000446579 MIDNQ504T8 468 aa4.84□□□□□ -1.63
LINC00440-201ENST00000446579 ASPHD1Q5U4P2 390 aa4.84□□□□□ -1.63
LINC00440-201ENST00000446579 DAB2IPQ5VWQ8 1189 aa4.84□□□□□ -1.63
LINC00440-201ENST00000446579 KRT80Q6KB66 452 aa4.84□□□□□ -1.63
LINC00440-201ENST00000446579 C11orf87Q6NUJ2 197 aa4.84□□□□□ -1.63
LINC00440-201ENST00000446579 FAM57BQ71RH2 274 aa4.84□□□□□ -1.63
LINC00440-201ENST00000446579 CCDC186Q7Z3E2 898 aa4.84□□□□□ -1.63
LINC00440-201ENST00000446579 LURAP1LQ8IV03 231 aa4.84□□□□□ -1.63
LINC00440-201ENST00000446579 ADGRF4Q8IZF3 695 aa4.84□□□□□ -1.63
LINC00440-201ENST00000446579 MMP21Q8N119 569 aa4.84□□□□□ -1.63
LINC00440-201ENST00000446579 BEST2Q8NFU1 509 aa4.84□□□□□ -1.63
LINC00440-201ENST00000446579 GSDMBQ8TAX9 411 aa4.84□□□□□ -1.63
LINC00440-201ENST00000446579 DENND1AQ8TEH3 1009 aa4.84□□□□□ -1.63
LINC00440-201ENST00000446579 TRPC4APQ8TEL6 797 aa4.84□□□□□ -1.63
LINC00440-201ENST00000446579 ZC3HAV1LQ96H79 300 aaKnown RBP4.84□□□□□ -1.63
LINC00440-201ENST00000446579 PAFAH2Q99487 392 aa4.84□□□□□ -1.63
LINC00440-201ENST00000446579 FAM118BQ9BPY3 351 aa4.84□□□□□ -1.63
LINC00440-201ENST00000446579 PDGFCQ9NRA1 345 aa4.84□□□□□ -1.63
LINC00440-201ENST00000446579 MRGBPQ9NV56 204 aa4.84□□□□□ -1.63
LINC00440-201ENST00000446579 ARGLU1Q9NWB6 273 aaPredicted RBP4.84□□□□□ -1.63
LINC00440-201ENST00000446579 ARHGEF38Q9NXL2 777 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms