RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	GBA3	Q9H227	469 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	FAM96A	Q9H5X1	160 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	RAB26	Q9ULW5	256 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	TRAF6	Q9Y4K3	522 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312		A0A0J9YYE9	177 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	TPPP	O94811	219 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	SNAP29	O95721	258 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	MYL3	P08590	195 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	MYL4	P12829	197 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	CCR1	P32246	355 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	GRM5	P41594	1212 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	GSS	P48637	474 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	GLUD2	P49448	558 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	DSC2	Q02487	901 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	STRADA	Q7RTN6	431 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	C11orf74	Q86VG3	221 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	PTGR2	Q8N8N7	351 aa	Predicted RBP	12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	NACC2	Q96BF6	587 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	C12orf42	Q96LP6	360 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	TEKT5	Q96M29	485 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	GPR22	Q99680	433 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	C16orf70	Q9BSU1	422 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	NAT9	Q9BTE0	207 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	PRPF19	Q9UMS4	504 aa	Known RBP	12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	COQ6	Q9Y2Z9	468 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	ARIH1	Q9Y4X5	557 aa	Predicted RBP	12.56	□□□□□ -0.4
DDR1-238	ENST00000446312		U3KQV3	271 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	UNC80	Q8N2C7	3258 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	NOTO	A8MTQ0	251 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	HACD1	B0YJ81	288 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	PTGES3L	E9PB15	166 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312		J3KR12	359 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	CLOCK	O15516	846 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	ALDOC	P09972	364 aa	Known RBP	12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	SMPD1	P17405	629 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	HMGB2	P26583	209 aa	Known RBP	12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	MZF1	P28698	734 aa	Predicted RBP	12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	PRDX3	P30048	256 aa	Known RBP	12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	CDKN2D	P55273	166 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	TPD52	P55327	224 aa	Predicted RBP	12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	PMS2P3	Q13401	168 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	GALNT3	Q14435	633 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	NAPEPLD	Q6IQ20	393 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	ANKRD13A	Q8IZ07	590 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	PAF1	Q8N7H5	531 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	SMG8	Q8ND04	991 aa	Known RBP	12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	C3orf58	Q8NDZ4	430 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	PPHLN1	Q8NEY8	458 aa	Known RBP	12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	TNIP3	Q96KP6	325 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	TBATA	Q96M53	351 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	RNF145	Q96MT1	663 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	IL22	Q9GZX6	179 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	UPF3A	Q9H1J1	476 aa	Known RBP	12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	CCDC68	Q9H2F9	335 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	AKTIP	Q9H8T0	292 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	WDR6	Q9NNW5	1121 aa	Known RBP	12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	IGSF9	Q9P2J2	1179 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	ZNF112	Q9UJU3	913 aa		12.56	□□□□□ -0.4
DDR1-238	ENST00000446312	TMEM114	B3SHH9	223 aa		12.55	□□□□□ -0.4
DDR1-238	ENST00000446312	PIP5K1B	O14986	540 aa		12.55	□□□□□ -0.4
DDR1-238	ENST00000446312	STRN	O43815	780 aa		12.55	□□□□□ -0.4
DDR1-238	ENST00000446312	YWHAH	Q04917	246 aa	Predicted RBP	12.55	□□□□□ -0.4
DDR1-238	ENST00000446312	SGO1	Q5FBB7	561 aa		12.55	□□□□□ -0.4
DDR1-238	ENST00000446312	PKN3	Q6P5Z2	889 aa		12.55	□□□□□ -0.4
DDR1-238	ENST00000446312	NOTUM	Q6P988	496 aa		12.55	□□□□□ -0.4
DDR1-238	ENST00000446312	PDZD4	Q76G19	769 aa	Predicted RBP	12.55	□□□□□ -0.4
DDR1-238	ENST00000446312	ZMIZ2	Q8NF64	920 aa		12.55	□□□□□ -0.4
DDR1-238	ENST00000446312	C11orf84	Q9BUA3	381 aa	Predicted RBP	12.55	□□□□□ -0.4
DDR1-238	ENST00000446312	RBM38	Q9H0Z9	239 aa	Known RBP	12.55	□□□□□ -0.4
DDR1-238	ENST00000446312	SPAG4	Q9NPE6	437 aa		12.55	□□□□□ -0.4
DDR1-238	ENST00000446312	CNGB3	Q9NQW8	809 aa		12.55	□□□□□ -0.4
DDR1-238	ENST00000446312	UBQLN1	Q9UMX0	589 aa	Known RBP	12.55	□□□□□ -0.4
DDR1-238	ENST00000446312		A0A0C4DFX4	3053 aa		12.55	□□□□□ -0.4
DDR1-238	ENST00000446312	NME4	O00746	187 aa		12.55	□□□□□ -0.4
DDR1-238	ENST00000446312	ANGPT2	O15123	496 aa		12.55	□□□□□ -0.4
DDR1-238	ENST00000446312	ADAM23	O75077	832 aa		12.55	□□□□□ -0.4
DDR1-238	ENST00000446312	B3GAT3	O94766	335 aa		12.55	□□□□□ -0.4
DDR1-238	ENST00000446312	HGF	P14210	728 aa		12.55	□□□□□ -0.4
DDR1-238	ENST00000446312	ITGB6	P18564	788 aa		12.55	□□□□□ -0.4
DDR1-238	ENST00000446312	SCNN1G	P51170	649 aa		12.55	□□□□□ -0.4
DDR1-238	ENST00000446312	EMP3	P54852	163 aa		12.55	□□□□□ -0.4
DDR1-238	ENST00000446312	POLD3	Q15054	466 aa	Predicted RBP	12.55	□□□□□ -0.4
DDR1-238	ENST00000446312	TIGD2	Q4W5G0	525 aa		12.55	□□□□□ -0.4
DDR1-238	ENST00000446312	PPP2R2D	Q66LE6	453 aa		12.55	□□□□□ -0.4
DDR1-238	ENST00000446312	AHI1	Q8N157	1196 aa		12.55	□□□□□ -0.4
DDR1-238	ENST00000446312	TEX37	Q96LM6	180 aa		12.55	□□□□□ -0.4
DDR1-238	ENST00000446312	TBCD	Q9BTW9	1192 aa		12.55	□□□□□ -0.4
DDR1-238	ENST00000446312	STN1	Q9H668	368 aa	Known RBP	12.55	□□□□□ -0.4
DDR1-238	ENST00000446312	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	12.55	□□□□□ -0.4
DDR1-238	ENST00000446312	KANSL1L	A0AUZ9	987 aa		12.54	□□□□□ -0.4
DDR1-238	ENST00000446312	KATNA1	O75449	491 aa		12.54	□□□□□ -0.4
DDR1-238	ENST00000446312	CAPN3	P20807	821 aa		12.54	□□□□□ -0.4
DDR1-238	ENST00000446312	AGTR2	P50052	363 aa		12.54	□□□□□ -0.4
DDR1-238	ENST00000446312	WNT3A	P56704	352 aa		12.54	□□□□□ -0.4
DDR1-238	ENST00000446312	ESRRG	P62508	458 aa		12.54	□□□□□ -0.4
DDR1-238	ENST00000446312	ITGAD	Q13349	1161 aa		12.54	□□□□□ -0.4
DDR1-238	ENST00000446312	BFSP2	Q13515	415 aa		12.54	□□□□□ -0.4
DDR1-238	ENST00000446312	MAPK11	Q15759	364 aa		12.54	□□□□□ -0.4
DDR1-238	ENST00000446312	ARL13B	Q3SXY8	428 aa		12.54	□□□□□ -0.4
DDR1-238	ENST00000446312	ZNF484	Q5JVG2	852 aa		12.54	□□□□□ -0.4

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