RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 IRGMA1A4Y4 181 aa18.65■□□□□ 0.58
SHANK3-203ENST00000445220 PSMA1P25786 263 aaKnown RBP18.65■□□□□ 0.58
SHANK3-203ENST00000445220 HNF4AP41235 474 aa18.65■□□□□ 0.58
SHANK3-203ENST00000445220 NOMO3P69849 1222 aa18.65■□□□□ 0.58
SHANK3-203ENST00000445220 IL18Q14116 193 aa18.65■□□□□ 0.58
SHANK3-203ENST00000445220 HGSNATQ68CP4 663 aa18.65■□□□□ 0.58
SHANK3-203ENST00000445220 SMYD1Q8NB12 490 aa18.65■□□□□ 0.58
SHANK3-203ENST00000445220 MTFMTQ96DP5 389 aaKnown RBP18.65■□□□□ 0.58
SHANK3-203ENST00000445220 SMARCD1Q96GM5 515 aa18.65■□□□□ 0.58
SHANK3-203ENST00000445220 LENG8Q96PV6 779 aaPredicted RBP18.65■□□□□ 0.58
SHANK3-203ENST00000445220 C12orf4Q9NQ89 552 aa18.65■□□□□ 0.58
SHANK3-203ENST00000445220 PDLIM1O00151 329 aa18.65■□□□□ 0.58
SHANK3-203ENST00000445220 KPNA5O15131 536 aa18.65■□□□□ 0.58
SHANK3-203ENST00000445220 TBX10O75333 385 aa18.65■□□□□ 0.58
SHANK3-203ENST00000445220 CYP7B1O75881 506 aa18.65■□□□□ 0.58
SHANK3-203ENST00000445220 PRKD3O94806 890 aa18.65■□□□□ 0.58
SHANK3-203ENST00000445220 LINC00032P0C843 101 aa18.65■□□□□ 0.58
SHANK3-203ENST00000445220 NR4A1P22736 598 aa18.65■□□□□ 0.58
SHANK3-203ENST00000445220 NADK2Q4G0N4 442 aa18.65■□□□□ 0.58
SHANK3-203ENST00000445220 BHLHB9Q6PI77 547 aa18.65■□□□□ 0.58
SHANK3-203ENST00000445220 CARNMT1Q8N4J0 409 aa18.65■□□□□ 0.58
SHANK3-203ENST00000445220 TLR8Q9NR97 1041 aaKnown RBP18.65■□□□□ 0.58
SHANK3-203ENST00000445220 IFT80Q9P2H3 777 aaPredicted RBP18.65■□□□□ 0.58
SHANK3-203ENST00000445220 PDE10AQ9Y233 779 aa18.65■□□□□ 0.58
SHANK3-203ENST00000445220 URODP06132 367 aa18.64■□□□□ 0.58
SHANK3-203ENST00000445220 ANXA5P08758 320 aa18.64■□□□□ 0.58
SHANK3-203ENST00000445220 BHMTQ93088 406 aa18.64■□□□□ 0.58
SHANK3-203ENST00000445220 AKT1S1Q96B36 256 aa18.64■□□□□ 0.58
SHANK3-203ENST00000445220 C1GALT1C1Q96EU7 318 aa18.64■□□□□ 0.58
SHANK3-203ENST00000445220 ITCHQ96J02 903 aa18.64■□□□□ 0.58
SHANK3-203ENST00000445220 NOTOA8MTQ0 251 aa18.64■□□□□ 0.57
SHANK3-203ENST00000445220 LACTBL1A8MY62 500 aa18.64■□□□□ 0.57
SHANK3-203ENST00000445220 NDUFS2O75306 463 aa18.64■□□□□ 0.57
SHANK3-203ENST00000445220 BOP1Q14137 746 aaKnown RBP18.64■□□□□ 0.57
SHANK3-203ENST00000445220 CPSF7Q8N684 471 aaKnown RBP18.64■□□□□ 0.57
SHANK3-203ENST00000445220 KAT8Q9H7Z6 458 aaKnown RBP18.64■□□□□ 0.57
SHANK3-203ENST00000445220 CAB39LQ9H9S4 337 aa18.64■□□□□ 0.57
SHANK3-203ENST00000445220 POPDC2Q9HBU9 364 aa18.64■□□□□ 0.57
SHANK3-203ENST00000445220 ZFP14Q9HCL3 533 aa18.64■□□□□ 0.57
SHANK3-203ENST00000445220 UBIAD1Q9Y5Z9 338 aa18.64■□□□□ 0.57
SHANK3-203ENST00000445220 TRIM64CA6NLI5 447 aa18.64■□□□□ 0.57
SHANK3-203ENST00000445220 MEIS2O14770 477 aa18.64■□□□□ 0.57
SHANK3-203ENST00000445220 SUV39H1O43463 412 aa18.64■□□□□ 0.57
SHANK3-203ENST00000445220 BMP10O95393 424 aa18.64■□□□□ 0.57
SHANK3-203ENST00000445220 RPL26P61254 145 aaKnown RBP18.64■□□□□ 0.57
SHANK3-203ENST00000445220 SIM2Q14190 667 aaPredicted RBP18.64■□□□□ 0.57
SHANK3-203ENST00000445220 KCTD19Q17RG1 926 aaPredicted RBP18.64■□□□□ 0.57
SHANK3-203ENST00000445220 TMPRSS11AQ6ZMR5 421 aa18.64■□□□□ 0.57
SHANK3-203ENST00000445220 USP50Q70EL3 339 aaPredicted RBP18.64■□□□□ 0.57
SHANK3-203ENST00000445220 ZFPM1Q8IX07 1006 aa18.64■□□□□ 0.57
SHANK3-203ENST00000445220 FAM20CQ8IXL6 584 aa18.64■□□□□ 0.57
SHANK3-203ENST00000445220 HELQQ8TDG4 1101 aa18.64■□□□□ 0.57
SHANK3-203ENST00000445220 PCDHB5Q9Y5E4 795 aa18.64■□□□□ 0.57
SHANK3-203ENST00000445220 NFASCO94856 1347 aa18.64■□□□□ 0.57
SHANK3-203ENST00000445220 ZBTB14O43829 449 aa18.64■□□□□ 0.57
SHANK3-203ENST00000445220 NFKB1P19838 968 aa18.64■□□□□ 0.57
SHANK3-203ENST00000445220 TIE1P35590 1138 aa18.64■□□□□ 0.57
SHANK3-203ENST00000445220 RIOX2Q8IUF8 465 aa18.64■□□□□ 0.57
SHANK3-203ENST00000445220 ZC3H7AQ8IWR0 971 aaKnown RBP18.64■□□□□ 0.57
SHANK3-203ENST00000445220 DRAXINQ8NBI3 349 aaPredicted RBP18.64■□□□□ 0.57
SHANK3-203ENST00000445220 SIPA1Q96FS4 1042 aa18.64■□□□□ 0.57
SHANK3-203ENST00000445220 ZNF570Q96NI8 536 aa18.64■□□□□ 0.57
SHANK3-203ENST00000445220 SLC4A9Q96Q91 983 aa18.64■□□□□ 0.57
SHANK3-203ENST00000445220 NLNQ9BYT8 704 aa18.64■□□□□ 0.57
SHANK3-203ENST00000445220 U3KQV3 271 aa18.64■□□□□ 0.57
SHANK3-203ENST00000445220 MANSC4A6NHS7 340 aaPredicted RBP18.63■□□□□ 0.57
SHANK3-203ENST00000445220 OR10H3O60404 316 aa18.63■□□□□ 0.57
SHANK3-203ENST00000445220 RNASEH1O60930 286 aaKnown RBP18.63■□□□□ 0.57
SHANK3-203ENST00000445220 CTSKP43235 329 aa18.63■□□□□ 0.57
SHANK3-203ENST00000445220 IRF8Q02556 426 aa18.63■□□□□ 0.57
SHANK3-203ENST00000445220 PPM1LQ5SGD2 360 aa18.63■□□□□ 0.57
SHANK3-203ENST00000445220 IQSEC1Q6DN90 963 aa18.63■□□□□ 0.57
SHANK3-203ENST00000445220 SPATA19Q7Z5L4 167 aa18.63■□□□□ 0.57
SHANK3-203ENST00000445220 USP7Q93009 1102 aa18.63■□□□□ 0.57
SHANK3-203ENST00000445220 RASSF1Q9NS23 344 aa18.63■□□□□ 0.57
SHANK3-203ENST00000445220 EXD2Q9NVH0 621 aa18.63■□□□□ 0.57
SHANK3-203ENST00000445220 RICTORQ6R327 1708 aa18.63■□□□□ 0.57
SHANK3-203ENST00000445220 TISP43B9A030 160 aa18.63■□□□□ 0.57
SHANK3-203ENST00000445220 FAUP35544 74 aaKnown RBP18.63■□□□□ 0.57
SHANK3-203ENST00000445220 ELMO1Q92556 727 aa18.63■□□□□ 0.57
SHANK3-203ENST00000445220 CD101Q93033 1021 aa18.63■□□□□ 0.57
SHANK3-203ENST00000445220 FBXO5Q9UKT4 447 aa18.63■□□□□ 0.57
SHANK3-203ENST00000445220 FAM149AA5PLN7 773 aa18.63■□□□□ 0.57
SHANK3-203ENST00000445220 KLHL33A6NCF5 533 aa18.63■□□□□ 0.57
SHANK3-203ENST00000445220 OTCP00480 354 aa18.63■□□□□ 0.57
SHANK3-203ENST00000445220 CALCAP01258 141 aa18.63■□□□□ 0.57
SHANK3-203ENST00000445220 FSTL1Q12841 308 aa18.63■□□□□ 0.57
SHANK3-203ENST00000445220 MFSD10Q14728 455 aa18.63■□□□□ 0.57
SHANK3-203ENST00000445220 UNC93AQ86WB7 457 aa18.63■□□□□ 0.57
SHANK3-203ENST00000445220 WNT8BQ93098 351 aa18.63■□□□□ 0.57
SHANK3-203ENST00000445220 SERPINB11Q96P15 392 aa18.63■□□□□ 0.57
SHANK3-203ENST00000445220 GLIS2Q9BZE0 524 aaPredicted RBP18.63■□□□□ 0.57
SHANK3-203ENST00000445220 ABCB9Q9NP78 766 aa18.63■□□□□ 0.57
SHANK3-203ENST00000445220 CPA4Q9UI42 421 aa18.63■□□□□ 0.57
SHANK3-203ENST00000445220 TMEM88BA6NKF7 163 aa18.63■□□□□ 0.57
SHANK3-203ENST00000445220 C9P02748 559 aa18.63■□□□□ 0.57
SHANK3-203ENST00000445220 AKR1A1P14550 325 aa18.63■□□□□ 0.57
SHANK3-203ENST00000445220 PTPRAP18433 802 aa18.63■□□□□ 0.57
SHANK3-203ENST00000445220 PSEN1P49768 467 aa18.63■□□□□ 0.57
SHANK3-203ENST00000445220 ATP6V0D1P61421 351 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms