RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 ARMC7Q9H6L4 198 aa10.62□□□□□ -0.71
TOP3B-210ENST00000444502 COPG2Q9UBF2 871 aa10.62□□□□□ -0.71
TOP3B-210ENST00000444502 ZNF212Q9UDV6 495 aa10.62□□□□□ -0.71
TOP3B-210ENST00000444502 PNMA8BQ9ULN7 279 aaPredicted RBP10.62□□□□□ -0.71
TOP3B-210ENST00000444502 TK2O00142 265 aa10.62□□□□□ -0.71
TOP3B-210ENST00000444502 IL4RP24394 825 aa10.62□□□□□ -0.71
TOP3B-210ENST00000444502 CREMQ03060 361 aa10.62□□□□□ -0.71
TOP3B-210ENST00000444502 PRKAA1Q13131 559 aa10.62□□□□□ -0.71
TOP3B-210ENST00000444502 TBCCQ15814 346 aa10.62□□□□□ -0.71
TOP3B-210ENST00000444502 GSTA3Q16772 222 aa10.62□□□□□ -0.71
TOP3B-210ENST00000444502 ERAP2Q6P179 960 aa10.62□□□□□ -0.71
TOP3B-210ENST00000444502 ARCQ7LC44 396 aa10.62□□□□□ -0.71
TOP3B-210ENST00000444502 TRAPPC5Q8IUR0 188 aa10.62□□□□□ -0.71
TOP3B-210ENST00000444502 ZNF366Q8N895 744 aa10.62□□□□□ -0.71
TOP3B-210ENST00000444502 DENND1AQ8TEH3 1009 aa10.62□□□□□ -0.71
TOP3B-210ENST00000444502 GFM2Q969S9 779 aaKnown RBP10.62□□□□□ -0.71
TOP3B-210ENST00000444502 PSMG2Q969U7 264 aa10.62□□□□□ -0.71
TOP3B-210ENST00000444502 CADM1Q9BY67 442 aaKnown RBP10.62□□□□□ -0.71
TOP3B-210ENST00000444502 POMKQ9H5K3 350 aa10.62□□□□□ -0.71
TOP3B-210ENST00000444502 ASB8Q9H765 288 aa10.62□□□□□ -0.71
TOP3B-210ENST00000444502 SSU72Q9NP77 194 aaKnown RBP10.62□□□□□ -0.71
TOP3B-210ENST00000444502 TAS2R1Q9NYW7 299 aa10.62□□□□□ -0.71
TOP3B-210ENST00000444502 EVLQ9UI08 416 aaPredicted RBP10.62□□□□□ -0.71
TOP3B-210ENST00000444502 ZFP37Q9Y6Q3 630 aaPredicted RBP10.62□□□□□ -0.71
TOP3B-210ENST00000444502 TCRBV5S1A1TA0A578 114 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 TTC24A2A3L6 582 aaPredicted RBP10.61□□□□□ -0.71
TOP3B-210ENST00000444502 E7ESA3 106 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 ITM2AO43736 263 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 MPSTP25325 297 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 SNRPD1P62314 119 aaKnown RBP10.61□□□□□ -0.71
TOP3B-210ENST00000444502 DSC2Q02487 901 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 SLC7A5P1Q8MH63 180 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 DHRS1Q96LJ7 313 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 CDRT15Q96T59 188 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 CCT7Q99832 543 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 CYLDQ9NQC7 956 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 GMEB1Q9Y692 573 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 ATP6AP2A0A1C7CYW4 349 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 ACSL4O60488 711 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 ATP6AP2O75787 350 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 STAU1O95793 577 aaKnown RBP10.61□□□□□ -0.71
TOP3B-210ENST00000444502 ANPEPP15144 967 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 SMARCB1Q12824 385 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 TRMT5Q32P41 509 aaKnown RBP10.61□□□□□ -0.71
TOP3B-210ENST00000444502 C16orf89Q6UX73 402 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 SLC39A5Q6ZMH5 540 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 RNF19BQ6ZMZ0 732 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 HDAC10Q969S8 669 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 TUBGCP3Q96CW5 907 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 ALG9Q9H6U8 611 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 LIN28AQ9H9Z2 209 aaKnown RBP10.61□□□□□ -0.71
TOP3B-210ENST00000444502 TUBA8Q9NY65 449 aaPredicted RBP10.61□□□□□ -0.71
TOP3B-210ENST00000444502 CCDC167Q9P0B6 97 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 NDUFA13Q9P0J0 144 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 DEC1Q9P2X7 70 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 FETUBQ9UGM5 382 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 VPS9D1Q9Y2B5 631 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 V9GYQ6 96 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 TRIM64CA6NLI5 447 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 BIRC5O15392 142 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 KATNA1O75449 491 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 HSPA8P11142 646 aaKnown RBP10.61□□□□□ -0.71
TOP3B-210ENST00000444502 GCAP28676 217 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 ESRRGP62508 458 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 PDK3Q15120 406 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 TREML1Q86YW5 311 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 MYO1HQ8N1T3 1032 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 GSTCDQ8NEC7 633 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 POF1BQ8WVV4 589 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 SLC39A8Q9C0K1 460 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 FAM124BQ9H5Z6 455 aaPredicted RBP10.61□□□□□ -0.71
TOP3B-210ENST00000444502 CLDND1Q9NY35 253 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 CIDEBQ9UHD4 219 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 CLCA2Q9UQC9 943 aa10.61□□□□□ -0.71
TOP3B-210ENST00000444502 RNF103-CHMP3A0A140T963 221 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 HTR3EA5X5Y0 456 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 ANGPT2O15123 496 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 PEX1O43933 1283 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 GSTT2P0CG29 244 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 GSTT2BP0CG30 244 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 RPL14P50914 215 aaKnown RBP10.6□□□□□ -0.71
TOP3B-210ENST00000444502 NEK2P51955 445 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 IRF9Q00978 393 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 CDK18Q07002 472 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 WASHC5Q12768 1159 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 NAB1Q13506 487 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 PRKD1Q15139 912 aaPredicted RBP10.6□□□□□ -0.71
TOP3B-210ENST00000444502 RIPOR1Q6ZS17 1223 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 RAB42Q8N4Z0 105 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 C12orf76Q8N812 135 aaPredicted RBP10.6□□□□□ -0.71
TOP3B-210ENST00000444502 SLC22A17Q8WUG5 538 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 NXNL1Q96CM4 212 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 MOCOSQ96EN8 888 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 FUBP3Q96I24 572 aaKnown RBP eCLIP10.6□□□□□ -0.71
TOP3B-210ENST00000444502 TEKT5Q96M29 485 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 GBA3Q9H227 469 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 COG4Q9H9E3 785 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 EFCAB1Q9HAE3 211 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 SMIM31A0A1B0GVY4 71 aa10.6□□□□□ -0.71
TOP3B-210ENST00000444502 FAM159BA6NKW6 160 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms