RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 PDHA1P08559 390 aa20.09■□□□□ 0.81
LRCH3-208ENST00000443727 HOXC4P09017 264 aaPredicted RBP20.09■□□□□ 0.81
LRCH3-208ENST00000443727 GM2AP17900 193 aa20.09■□□□□ 0.81
LRCH3-208ENST00000443727 TRIM23P36406 574 aa20.09■□□□□ 0.81
LRCH3-208ENST00000443727 SLC1A1P43005 524 aa20.09■□□□□ 0.81
LRCH3-208ENST00000443727 NOP2P46087 812 aaKnown RBP20.09■□□□□ 0.81
LRCH3-208ENST00000443727 LRRC38Q5VT99 294 aa20.09■□□□□ 0.81
LRCH3-208ENST00000443727 CDCP2Q5VXM1 449 aa20.09■□□□□ 0.81
LRCH3-208ENST00000443727 C19orf48Q6RUI8 117 aa20.09■□□□□ 0.81
LRCH3-208ENST00000443727 CRTC1Q6UUV9 634 aa20.09■□□□□ 0.81
LRCH3-208ENST00000443727 NYAP1Q6ZVC0 841 aa20.09■□□□□ 0.81
LRCH3-208ENST00000443727 HSD11B1LQ7Z5J1 315 aa20.09■□□□□ 0.81
LRCH3-208ENST00000443727 RFX6Q8HWS3 928 aa20.09■□□□□ 0.81
LRCH3-208ENST00000443727 RHOT1Q8IXI2 618 aa20.09■□□□□ 0.81
LRCH3-208ENST00000443727 ARL10Q8N8L6 244 aa20.09■□□□□ 0.81
LRCH3-208ENST00000443727 PIH1D2Q8WWB5 315 aa20.09■□□□□ 0.81
LRCH3-208ENST00000443727 OR1E3Q8WZA6 343 aa20.09■□□□□ 0.81
LRCH3-208ENST00000443727 HDAC11Q96DB2 347 aa20.09■□□□□ 0.81
LRCH3-208ENST00000443727 DTD2Q96FN9 168 aa20.09■□□□□ 0.81
LRCH3-208ENST00000443727 MCCC1Q96RQ3 725 aaPredicted RBP20.09■□□□□ 0.81
LRCH3-208ENST00000443727 SYNDIG1Q9H7V2 258 aa20.09■□□□□ 0.81
LRCH3-208ENST00000443727 CYP4F12Q9HCS2 524 aa20.09■□□□□ 0.81
LRCH3-208ENST00000443727 FGF22Q9HCT0 170 aa20.09■□□□□ 0.81
LRCH3-208ENST00000443727 PHPT1Q9NRX4 125 aaPredicted RBP20.09■□□□□ 0.81
LRCH3-208ENST00000443727 DGKBQ9Y6T7 804 aa20.09■□□□□ 0.81
LRCH3-208ENST00000443727 CFAP47Q6ZTR5 3102 aa20.08■□□□□ 0.81
LRCH3-208ENST00000443727 ZNF487B1APH4 448 aa20.08■□□□□ 0.81
LRCH3-208ENST00000443727 PSMD11O00231 422 aa20.08■□□□□ 0.81
LRCH3-208ENST00000443727 TNFRSF10CO14798 259 aa20.08■□□□□ 0.81
LRCH3-208ENST00000443727 CSO75390 466 aaKnown RBP20.08■□□□□ 0.81
LRCH3-208ENST00000443727 JCHAINP01591 159 aa20.08■□□□□ 0.81
LRCH3-208ENST00000443727 HLA-DQB2P05538 268 aa20.08■□□□□ 0.81
LRCH3-208ENST00000443727 MYCLP1P12525 358 aaPredicted RBP20.08■□□□□ 0.81
LRCH3-208ENST00000443727 ZFXP17010 805 aaPredicted RBP20.08■□□□□ 0.81
LRCH3-208ENST00000443727 LHCGRP22888 699 aa20.08■□□□□ 0.81
LRCH3-208ENST00000443727 MAGEA1P43355 309 aa20.08■□□□□ 0.81
LRCH3-208ENST00000443727 SLC10A2Q12908 348 aaPredicted RBP20.08■□□□□ 0.81
LRCH3-208ENST00000443727 RTP5Q14D33 572 aa20.08■□□□□ 0.81
LRCH3-208ENST00000443727 PTPRRQ15256 657 aa20.08■□□□□ 0.81
LRCH3-208ENST00000443727 RAET1GQ6H3X3 334 aa20.08■□□□□ 0.81
LRCH3-208ENST00000443727 Q6ZVL8 140 aa20.08■□□□□ 0.81
LRCH3-208ENST00000443727 TAF8Q7Z7C8 310 aa20.08■□□□□ 0.81
LRCH3-208ENST00000443727 TSPAN33Q86UF1 283 aa20.08■□□□□ 0.81
LRCH3-208ENST00000443727 HNRNPLLQ8WVV9 542 aaKnown RBP20.08■□□□□ 0.81
LRCH3-208ENST00000443727 RNF25Q96BH1 459 aaPredicted RBP20.08■□□□□ 0.81
LRCH3-208ENST00000443727 DCBLD2Q96PD2 775 aa20.08■□□□□ 0.81
LRCH3-208ENST00000443727 RBM15Q96T37 977 aaKnown RBP eCLIP20.08■□□□□ 0.81
LRCH3-208ENST00000443727 LGMNQ99538 433 aa20.08■□□□□ 0.81
LRCH3-208ENST00000443727 LGR4Q9BXB1 951 aa20.08■□□□□ 0.81
LRCH3-208ENST00000443727 MRPL40Q9NQ50 206 aaKnown RBP20.08■□□□□ 0.81
LRCH3-208ENST00000443727 DDX56Q9NY93 547 aaKnown RBP20.08■□□□□ 0.81
LRCH3-208ENST00000443727 RALYQ9UKM9 306 aaKnown RBP20.08■□□□□ 0.81
LRCH3-208ENST00000443727 LHX6Q9UPM6 363 aa20.08■□□□□ 0.81
LRCH3-208ENST00000443727 CHKBQ9Y259 395 aa20.08■□□□□ 0.81
LRCH3-208ENST00000443727 HYOU1Q9Y4L1 999 aa20.08■□□□□ 0.81
LRCH3-208ENST00000443727 DSPP15924 2871 aaKnown RBP20.08■□□□□ 0.8
LRCH3-208ENST00000443727 KCNK1O00180 336 aa20.07■□□□□ 0.8
LRCH3-208ENST00000443727 TGM2P21980 687 aa20.07■□□□□ 0.8
LRCH3-208ENST00000443727 AP1B1Q10567 949 aa20.07■□□□□ 0.8
LRCH3-208ENST00000443727 PDK1Q15118 436 aa20.07■□□□□ 0.8
LRCH3-208ENST00000443727 SPA17Q15506 151 aa20.07■□□□□ 0.8
LRCH3-208ENST00000443727 PERM1Q5SV97 790 aa20.07■□□□□ 0.8
LRCH3-208ENST00000443727 LRRC66Q68CR7 880 aa20.07■□□□□ 0.8
LRCH3-208ENST00000443727 KCTD16Q68DU8 428 aa20.07■□□□□ 0.8
LRCH3-208ENST00000443727 ALG1LQ6GMV1 187 aa20.07■□□□□ 0.8
LRCH3-208ENST00000443727 HEATR4Q86WZ0 1026 aa20.07■□□□□ 0.8
LRCH3-208ENST00000443727 VSIG1Q86XK7 387 aa20.07■□□□□ 0.8
LRCH3-208ENST00000443727 PELI3Q8N2H9 469 aa20.07■□□□□ 0.8
LRCH3-208ENST00000443727 PLD5Q8N7P1 536 aa20.07■□□□□ 0.8
LRCH3-208ENST00000443727 KYQ8NBH2 561 aa20.07■□□□□ 0.8
LRCH3-208ENST00000443727 SUDS3Q9H7L9 328 aaPredicted RBP20.07■□□□□ 0.8
LRCH3-208ENST00000443727 SEPT10Q9P0V9 454 aa20.07■□□□□ 0.8
LRCH3-208ENST00000443727 PPIL1Q9Y3C6 166 aa20.07■□□□□ 0.8
LRCH3-208ENST00000443727 GPSM3Q9Y4H4 160 aa20.07■□□□□ 0.8
LRCH3-208ENST00000443727 PCDHB1Q9Y5F3 818 aa20.07■□□□□ 0.8
LRCH3-208ENST00000443727 A0A0J9YYE9 177 aa20.06■□□□□ 0.8
LRCH3-208ENST00000443727 C3orf70A6NLC5 250 aaPredicted RBP20.06■□□□□ 0.8
LRCH3-208ENST00000443727 FZD6O60353 706 aa20.06■□□□□ 0.8
LRCH3-208ENST00000443727 USP12O75317 370 aa20.06■□□□□ 0.8
LRCH3-208ENST00000443727 TRBC1P01850 177 aa20.06■□□□□ 0.8
LRCH3-208ENST00000443727 COMTP21964 271 aa20.06■□□□□ 0.8
LRCH3-208ENST00000443727 DYNLT1P63172 113 aa20.06■□□□□ 0.8
LRCH3-208ENST00000443727 PPIDQ08752 370 aaKnown RBP20.06■□□□□ 0.8
LRCH3-208ENST00000443727 NIPAL4Q0D2K0 466 aa20.06■□□□□ 0.8
LRCH3-208ENST00000443727 SLC9A4Q6AI14 798 aa20.06■□□□□ 0.8
LRCH3-208ENST00000443727 RBM44Q6ZP01 1051 aaKnown RBP20.06■□□□□ 0.8
LRCH3-208ENST00000443727 TC2NQ8N9U0 490 aa20.06■□□□□ 0.8
LRCH3-208ENST00000443727 FAM46DQ8NEK8 389 aa20.06■□□□□ 0.8
LRCH3-208ENST00000443727 LPCAT1Q8NF37 534 aa20.06■□□□□ 0.8
LRCH3-208ENST00000443727 ARRDC2Q8TBH0 407 aa20.06■□□□□ 0.8
LRCH3-208ENST00000443727 CCDC3Q9BQI4 270 aa20.06■□□□□ 0.8
LRCH3-208ENST00000443727 TDRD1Q9BXT4 1180 aaKnown RBP20.06■□□□□ 0.8
LRCH3-208ENST00000443727 CARS2Q9HA77 564 aaKnown RBP20.06■□□□□ 0.8
LRCH3-208ENST00000443727 PCDH9Q9HC56 1237 aa20.06■□□□□ 0.8
LRCH3-208ENST00000443727 LUC7LQ9NQ29 371 aaKnown RBP20.06■□□□□ 0.8
LRCH3-208ENST00000443727 CD84Q9UIB8 345 aa20.06■□□□□ 0.8
LRCH3-208ENST00000443727 DNPEPQ9ULA0 475 aa20.06■□□□□ 0.8
LRCH3-208ENST00000443727 A0A0U1RQS6 177 aa20.05■□□□□ 0.8
LRCH3-208ENST00000443727 PRSS38A1L453 326 aa20.05■□□□□ 0.8
LRCH3-208ENST00000443727 PPP1R12AO14974 1030 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms