RNA–Protein interactions for RNA: ENST00000443660.5

MRPL40-202, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 954 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-202ENST00000443660 NOL6Q9H6R4 1146 aaKnown RBP14.87□□□□□ -0.03
MRPL40-202ENST00000443660 SIX2Q9NPC8 291 aa14.87□□□□□ -0.03
MRPL40-202ENST00000443660 PHPT1Q9NRX4 125 aaPredicted RBP14.87□□□□□ -0.03
MRPL40-202ENST00000443660 VPS4AQ9UN37 437 aa14.87□□□□□ -0.03
MRPL40-202ENST00000443660 NEU3Q9UQ49 428 aa14.87□□□□□ -0.03
MRPL40-202ENST00000443660 SPTAN1Q13813 2472 aaKnown RBP14.86□□□□□ -0.03
MRPL40-202ENST00000443660 MKRN2OSH3BPM6 223 aa14.86□□□□□ -0.03
MRPL40-202ENST00000443660 PPM1DO15297 605 aa14.86□□□□□ -0.03
MRPL40-202ENST00000443660 KRT7P08729 469 aa14.86□□□□□ -0.03
MRPL40-202ENST00000443660 ERCC5P28715 1186 aaPredicted RBP14.86□□□□□ -0.03
MRPL40-202ENST00000443660 OAS2P29728 719 aaKnown RBP14.86□□□□□ -0.03
MRPL40-202ENST00000443660 MTIF2P46199 727 aaKnown RBP14.86□□□□□ -0.03
MRPL40-202ENST00000443660 GNPDA1P46926 289 aa14.86□□□□□ -0.03
MRPL40-202ENST00000443660 MLLT10P55197 1068 aa14.86□□□□□ -0.03
MRPL40-202ENST00000443660 GPLD1P80108 840 aa14.86□□□□□ -0.03
MRPL40-202ENST00000443660 ABHD18Q0P651 414 aa14.86□□□□□ -0.03
MRPL40-202ENST00000443660 NAA35Q5VZE5 725 aa14.86□□□□□ -0.03
MRPL40-202ENST00000443660 AFMIDQ63HM1 303 aa14.86□□□□□ -0.03
MRPL40-202ENST00000443660 CEACAM20Q6UY09 585 aa14.86□□□□□ -0.03
MRPL40-202ENST00000443660 SLFN11Q7Z7L1 901 aa14.86□□□□□ -0.03
MRPL40-202ENST00000443660 SRLQ86TD4 932 aa14.86□□□□□ -0.03
MRPL40-202ENST00000443660 ZSWIM9Q86XI8 627 aa14.86□□□□□ -0.03
MRPL40-202ENST00000443660 UNC5BQ8IZJ1 945 aa14.86□□□□□ -0.03
MRPL40-202ENST00000443660 CCDC185Q8N715 623 aa14.86□□□□□ -0.03
MRPL40-202ENST00000443660 STARD8Q92502 1023 aa14.86□□□□□ -0.03
MRPL40-202ENST00000443660 NTAN1Q96AB6 310 aa14.86□□□□□ -0.03
MRPL40-202ENST00000443660 RTP4Q96DX8 246 aa14.86□□□□□ -0.03
MRPL40-202ENST00000443660 CATSPERBQ9H7T0 1116 aa14.86□□□□□ -0.03
MRPL40-202ENST00000443660 PRDM8Q9NQV8 689 aa14.86□□□□□ -0.03
MRPL40-202ENST00000443660 KCTD5Q9NXV2 234 aa14.86□□□□□ -0.03
MRPL40-202ENST00000443660 DONSONQ9NYP3 566 aa14.86□□□□□ -0.03
MRPL40-202ENST00000443660 TP53TG5Q9Y2B4 290 aa14.86□□□□□ -0.03
MRPL40-202ENST00000443660 KCTD3Q9Y597 815 aa14.86□□□□□ -0.03
MRPL40-202ENST00000443660 PCDHB3Q9Y5E6 796 aa14.86□□□□□ -0.03
MRPL40-202ENST00000443660 RELNP78509 3460 aa14.86□□□□□ -0.03
MRPL40-202ENST00000443660 A8MX80 341 aa14.85□□□□□ -0.03
MRPL40-202ENST00000443660 AK4P27144 223 aaPredicted RBP14.85□□□□□ -0.03
MRPL40-202ENST00000443660 PTPN9P43378 593 aa14.85□□□□□ -0.03
MRPL40-202ENST00000443660 CSNK1DP48730 415 aa14.85□□□□□ -0.03
MRPL40-202ENST00000443660 MC2RQ01718 297 aa14.85□□□□□ -0.03
MRPL40-202ENST00000443660 BCL2L1Q07817 233 aa14.85□□□□□ -0.03
MRPL40-202ENST00000443660 RALGDSQ12967 914 aa14.85□□□□□ -0.03
MRPL40-202ENST00000443660 CRTC2Q53ET0 693 aaPredicted RBP14.85□□□□□ -0.03
MRPL40-202ENST00000443660 DPPA4Q7L190 304 aa14.85□□□□□ -0.03
MRPL40-202ENST00000443660 NAGSQ8N159 534 aa14.85□□□□□ -0.03
MRPL40-202ENST00000443660 UMODL1-AS1Q8N2C9 162 aa14.85□□□□□ -0.03
MRPL40-202ENST00000443660 EFCAB3Q8N7B9 438 aa14.85□□□□□ -0.03
MRPL40-202ENST00000443660 OR10G6Q8NH81 332 aa14.85□□□□□ -0.03
MRPL40-202ENST00000443660 GPT2Q8TD30 523 aa14.85□□□□□ -0.03
MRPL40-202ENST00000443660 FAM172AQ8WUF8 416 aa14.85□□□□□ -0.03
MRPL40-202ENST00000443660 PATE1Q8WXA2 126 aa14.85□□□□□ -0.03
MRPL40-202ENST00000443660 CTRCQ99895 268 aa14.85□□□□□ -0.03
MRPL40-202ENST00000443660 SPRY4Q9C004 299 aa14.85□□□□□ -0.03
MRPL40-202ENST00000443660 TMEM9Q9P0T7 183 aa14.85□□□□□ -0.03
MRPL40-202ENST00000443660 RWDD2AQ9UIY3 292 aa14.85□□□□□ -0.03
MRPL40-202ENST00000443660 DOCK4Q8N1I0 1966 aa14.85□□□□□ -0.03
MRPL40-202ENST00000443660 NBASA2RRP1 2371 aa14.84□□□□□ -0.03
MRPL40-202ENST00000443660 C2CD4BA6NLJ0 364 aa14.84□□□□□ -0.03
MRPL40-202ENST00000443660 A8MU76 341 aa14.84□□□□□ -0.03
MRPL40-202ENST00000443660 CREB3O43889 395 aa14.84□□□□□ -0.03
MRPL40-202ENST00000443660 CEACAM5P06731 702 aa14.84□□□□□ -0.03
MRPL40-202ENST00000443660 MMEP08473 750 aa14.84□□□□□ -0.03
MRPL40-202ENST00000443660 HDAC4P56524 1084 aa14.84□□□□□ -0.03
MRPL40-202ENST00000443660 NOMO3P69849 1222 aa14.84□□□□□ -0.03
MRPL40-202ENST00000443660 CTBSQ01459 385 aa14.84□□□□□ -0.03
MRPL40-202ENST00000443660 SNAP47Q5SQN1 464 aa14.84□□□□□ -0.03
MRPL40-202ENST00000443660 TCTN3Q6NUS6 607 aa14.84□□□□□ -0.03
MRPL40-202ENST00000443660 SCYL2Q6P3W7 929 aa14.84□□□□□ -0.03
MRPL40-202ENST00000443660 HEATR4Q86WZ0 1026 aa14.84□□□□□ -0.03
MRPL40-202ENST00000443660 PYROXD2Q8N2H3 581 aa14.84□□□□□ -0.03
MRPL40-202ENST00000443660 BMPERQ8N8U9 685 aa14.84□□□□□ -0.03
MRPL40-202ENST00000443660 CENPIQ92674 756 aaPredicted RBP14.84□□□□□ -0.03
MRPL40-202ENST00000443660 SLC38A3Q99624 504 aa14.84□□□□□ -0.03
MRPL40-202ENST00000443660 TEX101Q9BY14 249 aa14.84□□□□□ -0.03
MRPL40-202ENST00000443660 FBXO8Q9NRD0 319 aa14.84□□□□□ -0.03
MRPL40-202ENST00000443660 PDP2Q9P2J9 529 aa14.84□□□□□ -0.03
MRPL40-202ENST00000443660 SUFUQ9UMX1 484 aa14.84□□□□□ -0.03
MRPL40-202ENST00000443660 SDK2Q58EX2 2172 aa14.84□□□□□ -0.03
MRPL40-202ENST00000443660 WASH4PA8MWX3 477 aa14.83□□□□□ -0.04
MRPL40-202ENST00000443660 J3KR12 359 aa14.83□□□□□ -0.04
MRPL40-202ENST00000443660 PALMO75781 387 aa14.83□□□□□ -0.04
MRPL40-202ENST00000443660 STK17BO94768 372 aa14.83□□□□□ -0.04
MRPL40-202ENST00000443660 FUCA1P04066 466 aa14.83□□□□□ -0.04
MRPL40-202ENST00000443660 KRT3P12035 628 aa14.83□□□□□ -0.04
MRPL40-202ENST00000443660 CSF2RBP32927 897 aa14.83□□□□□ -0.04
MRPL40-202ENST00000443660 ACTR1BP42025 376 aa14.83□□□□□ -0.04
MRPL40-202ENST00000443660 ACTR1AP61163 376 aa14.83□□□□□ -0.04
MRPL40-202ENST00000443660 ASB18Q6ZVZ8 466 aa14.83□□□□□ -0.04
MRPL40-202ENST00000443660 TIPARPQ7Z3E1 657 aaKnown RBP14.83□□□□□ -0.04
MRPL40-202ENST00000443660 NOP9Q86U38 636 aaKnown RBP14.83□□□□□ -0.04
MRPL40-202ENST00000443660 CCDC13Q8IYE1 715 aa14.83□□□□□ -0.04
MRPL40-202ENST00000443660 JOSD2Q8TAC2 188 aa14.83□□□□□ -0.04
MRPL40-202ENST00000443660 ECHDC3Q96DC8 303 aa14.83□□□□□ -0.04
MRPL40-202ENST00000443660 NUS1Q96E22 293 aa14.83□□□□□ -0.04
MRPL40-202ENST00000443660 TMEM184BQ9Y519 407 aaPredicted RBP14.83□□□□□ -0.04
MRPL40-202ENST00000443660 KCNMB2Q9Y691 235 aa14.83□□□□□ -0.04
MRPL40-202ENST00000443660 CHD5Q8TDI0 1954 aa14.83□□□□□ -0.04
MRPL40-202ENST00000443660 GOLGA6CA6NDK9 693 aa14.82□□□□□ -0.04
MRPL40-202ENST00000443660 GOLGA6BA6NDN3 693 aa14.82□□□□□ -0.04
MRPL40-202ENST00000443660 TTLL8A6PVC2 850 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms