RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 OSTNP61366 133 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 EFL1Q7Z2Z2 1120 aaKnown RBP5.03□□□□□ -1.6
HERC1-201ENST00000443617 CCDC185Q8N715 623 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 TXNDC5Q8NBS9 432 aaKnown RBP5.03□□□□□ -1.6
HERC1-201ENST00000443617 PEBP4Q96S96 227 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 KCTD15Q96SI1 283 aaPredicted RBP5.03□□□□□ -1.6
HERC1-201ENST00000443617 DUS2Q9NX74 493 aaKnown RBP5.03□□□□□ -1.6
HERC1-201ENST00000443617 MYO5AQ9Y4I1 1855 aaKnown RBP5.03□□□□□ -1.6
HERC1-201ENST00000443617 A6NL46 340 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 MYO1GB0I1T2 1018 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 RBBP7Q16576 425 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 HSDL1Q3SXM5 330 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 ZC3HC1Q86WB0 502 aaKnown RBP5.03□□□□□ -1.6
HERC1-201ENST00000443617 PLD6Q8N2A8 252 aaKnown RBP5.03□□□□□ -1.6
HERC1-201ENST00000443617 RYBPQ8N488 228 aaPredicted RBP5.03□□□□□ -1.6
HERC1-201ENST00000443617 JPH3Q8WXH2 748 aaPredicted RBP5.03□□□□□ -1.6
HERC1-201ENST00000443617 LRRC58Q96CX6 371 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 DUS3LQ96G46 650 aaKnown RBP5.03□□□□□ -1.6
HERC1-201ENST00000443617 UHRF1Q96T88 793 aaPredicted RBP5.03□□□□□ -1.6
HERC1-201ENST00000443617 EHD3Q9NZN3 535 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 ATP6AP2A0A1C7CYW4 349 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 CCDC182A6NF36 153 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 CRKP46108 304 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 NOVP48745 357 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 VBP1P61758 197 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 CEP78Q5JTW2 689 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 DNAJB14Q8TBM8 379 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 MID1IP1Q9NPA3 183 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 CMTM6Q9NX76 183 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 RAPGEFL1Q9UHV5 662 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 MKLN1Q9UL63 735 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 HES2Q9Y543 173 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 PCDHB3Q9Y5E6 796 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 PRKD3O94806 890 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 METTL18O95568 372 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 CD40LGP29965 261 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 HIST2H2ACQ16777 129 aaPredicted RBP5.02□□□□□ -1.61
HERC1-201ENST00000443617 XKR3Q5GH77 459 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 SIGIRRQ6IA17 410 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 C15orf39Q6ZRI6 1047 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 RAVER1Q8IY67 606 aaKnown RBP5.02□□□□□ -1.61
HERC1-201ENST00000443617 IL31RAQ8NI17 732 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 PHF21BQ96EK2 531 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 MUS81Q96NY9 551 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 P2RX7Q99572 595 aaKnown RBP5.02□□□□□ -1.61
HERC1-201ENST00000443617 PAK1IP1Q9NWT1 392 aaPredicted RBP5.02□□□□□ -1.61
HERC1-201ENST00000443617 PCDHAC2Q9Y5I4 1007 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 HDCP19113 662 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 RAB10P61026 200 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 RAB14P61106 215 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 SLC6A3Q01959 620 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 HMBOX1Q6NT76 420 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 CDYL2Q8N8U2 506 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 FLCNQ8NFG4 579 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 RBBP8Q99708 897 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 ELOVL4Q9GZR5 314 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 ARID1BQ8NFD5 2236 aaPredicted RBP5.02□□□□□ -1.61
HERC1-201ENST00000443617 DHX15O43143 795 aaKnown RBP5.02□□□□□ -1.61
HERC1-201ENST00000443617 ICAM1P05362 532 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 GABARAPL2P60520 117 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 VPS72Q15906 364 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 LRIT3Q3SXY7 679 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 SCUBE3Q8IX30 993 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 GALNT12Q8IXK2 581 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 FAM20CQ8IXL6 584 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 KDM1BQ8NB78 822 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 OR6P1Q8NGX9 317 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 RHOXF1Q8NHV9 184 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 STON2Q8WXE9 905 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 TUBGCP3Q96CW5 907 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 CSPG4P5Q96PW8 444 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 THUMPD3Q9BV44 507 aaKnown RBP5.02□□□□□ -1.61
HERC1-201ENST00000443617 AKTIPQ9H8T0 292 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 LINC00032P0C843 101 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 CYP4B1P13584 511 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 POU4F1Q01851 419 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 NSUN2Q08J23 767 aaKnown RBP eCLIP5.02□□□□□ -1.61
HERC1-201ENST00000443617 PROSER1Q86XN7 944 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 SPARTQ8N0X7 666 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 POLR3BQ9NW08 1133 aaPredicted RBP5.02□□□□□ -1.61
HERC1-201ENST00000443617 LIMD1Q9UGP4 676 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 TRHDEQ9UKU6 1024 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 ZNF541Q9H0D2 1346 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 H3BMM5 538 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 UGT2B11O75310 529 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 LCP1P13796 627 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 HSD17B1P14061 328 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 CSNK2BP67870 215 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 DAG1Q14118 895 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 GADL1Q6ZQY3 521 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 GET4Q7L5D6 327 aaPredicted RBP5.02□□□□□ -1.61
HERC1-201ENST00000443617 VMP1Q96GC9 406 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 MAELQ96JY0 434 aaKnown RBP5.02□□□□□ -1.61
HERC1-201ENST00000443617 DSN1Q9H410 356 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 DYRK4Q9NR20 520 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 FBXO8Q9NRD0 319 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 ZNF277Q9NRM2 450 aaPredicted RBP5.02□□□□□ -1.61
HERC1-201ENST00000443617 ERVK-18Q9QC07 812 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 SPAG17Q6Q759 2223 aa5.02□□□□□ -1.61
HERC1-201ENST00000443617 BTN3A3O00478 584 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms