RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 FHOD1Q9Y613 1164 aa14.42□□□□□ -0.1
HMGN1-208ENST00000443046 IGHV1OR21-1A0A087WYE8 117 aa14.41□□□□□ -0.1
HMGN1-208ENST00000443046 PDE2AO00408 941 aaPredicted RBP14.41□□□□□ -0.1
HMGN1-208ENST00000443046 ELFN1P0C7U0 828 aa14.41□□□□□ -0.1
HMGN1-208ENST00000443046 MYCLP1P12525 358 aaPredicted RBP14.41□□□□□ -0.1
HMGN1-208ENST00000443046 CSTF2P33240 577 aaKnown RBP eCLIP14.41□□□□□ -0.1
HMGN1-208ENST00000443046 RGRP47804 291 aa14.41□□□□□ -0.1
HMGN1-208ENST00000443046 RAB15P59190 212 aa14.41□□□□□ -0.1
HMGN1-208ENST00000443046 CDC20Q12834 499 aa14.41□□□□□ -0.1
HMGN1-208ENST00000443046 RAPGEF1Q13905 1077 aa14.41□□□□□ -0.1
HMGN1-208ENST00000443046 MIIPQ5JXC2 388 aa14.41□□□□□ -0.1
HMGN1-208ENST00000443046 DCAF12Q5T6F0 453 aa14.41□□□□□ -0.1
HMGN1-208ENST00000443046 NKAIN2Q5VXU1 208 aa14.41□□□□□ -0.1
HMGN1-208ENST00000443046 SLFN11Q7Z7L1 901 aa14.41□□□□□ -0.1
HMGN1-208ENST00000443046 CBARPQ8N350 705 aaPredicted RBP14.41□□□□□ -0.1
HMGN1-208ENST00000443046 PTCD2Q8WV60 388 aaKnown RBP14.41□□□□□ -0.1
HMGN1-208ENST00000443046 PATE1Q8WXA2 126 aa14.41□□□□□ -0.1
HMGN1-208ENST00000443046 SPOCK2Q92563 424 aa14.41□□□□□ -0.1
HMGN1-208ENST00000443046 COQ10AQ96MF6 247 aa14.41□□□□□ -0.1
HMGN1-208ENST00000443046 TEX101Q9BY14 249 aa14.41□□□□□ -0.1
HMGN1-208ENST00000443046 GSDMCQ9BYG8 508 aa14.41□□□□□ -0.1
HMGN1-208ENST00000443046 FRMD8Q9BZ67 464 aaPredicted RBP14.41□□□□□ -0.1
HMGN1-208ENST00000443046 CARS2Q9HA77 564 aaKnown RBP14.41□□□□□ -0.1
HMGN1-208ENST00000443046 TMEM9Q9P0T7 183 aa14.41□□□□□ -0.1
HMGN1-208ENST00000443046 NOCTQ9UK39 431 aaKnown RBP14.41□□□□□ -0.1
HMGN1-208ENST00000443046 LOC101059948A0A1B0GTJ6 334 aa14.4□□□□□ -0.1
HMGN1-208ENST00000443046 J3KR12 359 aa14.4□□□□□ -0.1
HMGN1-208ENST00000443046 TRAFD1O14545 582 aaPredicted RBP14.4□□□□□ -0.1
HMGN1-208ENST00000443046 PRAMEF11O60813 436 aa14.4□□□□□ -0.1
HMGN1-208ENST00000443046 AK4P27144 223 aaPredicted RBP14.4□□□□□ -0.1
HMGN1-208ENST00000443046 MAP4P27816 1152 aaKnown RBP14.4□□□□□ -0.1
HMGN1-208ENST00000443046 OAS2P29728 719 aaKnown RBP14.4□□□□□ -0.1
HMGN1-208ENST00000443046 MTIF2P46199 727 aaKnown RBP14.4□□□□□ -0.1
HMGN1-208ENST00000443046 GSCP56915 257 aaPredicted RBP14.4□□□□□ -0.1
HMGN1-208ENST00000443046 ILF3Q12906 894 aaKnown RBP eCLIP14.4□□□□□ -0.1
HMGN1-208ENST00000443046 PTP4A2Q12974 167 aa14.4□□□□□ -0.1
HMGN1-208ENST00000443046 MAN2A1Q16706 1144 aa14.4□□□□□ -0.1
HMGN1-208ENST00000443046 ANKS6Q68DC2 871 aa14.4□□□□□ -0.1
HMGN1-208ENST00000443046 TMEM71Q6P5X7 295 aa14.4□□□□□ -0.1
HMGN1-208ENST00000443046 TIPARPQ7Z3E1 657 aaKnown RBP14.4□□□□□ -0.1
HMGN1-208ENST00000443046 SRLQ86TD4 932 aa14.4□□□□□ -0.1
HMGN1-208ENST00000443046 ZNF677Q86XU0 584 aa14.4□□□□□ -0.1
HMGN1-208ENST00000443046 APOBEC4Q8WW27 367 aaKnown RBP14.4□□□□□ -0.1
HMGN1-208ENST00000443046 RTP4Q96DX8 246 aa14.4□□□□□ -0.1
HMGN1-208ENST00000443046 NSMCE3Q96MG7 304 aa14.4□□□□□ -0.1
HMGN1-208ENST00000443046 TEFMQ96QE5 360 aaKnown RBP14.4□□□□□ -0.1
HMGN1-208ENST00000443046 NDST4Q9H3R1 872 aa14.4□□□□□ -0.1
HMGN1-208ENST00000443046 ATP13A3Q9H7F0 1226 aa14.4□□□□□ -0.1
HMGN1-208ENST00000443046 EFCAB7A8K855 629 aa14.39□□□□□ -0.11
HMGN1-208ENST00000443046 F8VZ95 297 aa14.39□□□□□ -0.11
HMGN1-208ENST00000443046 TEX33O43247 280 aa14.39□□□□□ -0.11
HMGN1-208ENST00000443046 UCHL3P15374 230 aa14.39□□□□□ -0.11
HMGN1-208ENST00000443046 CHRNB2P17787 502 aa14.39□□□□□ -0.11
HMGN1-208ENST00000443046 MPSTP25325 297 aa14.39□□□□□ -0.11
HMGN1-208ENST00000443046 SERPINA4P29622 427 aa14.39□□□□□ -0.11
HMGN1-208ENST00000443046 RFC1P35251 1148 aaPredicted RBP14.39□□□□□ -0.11
HMGN1-208ENST00000443046 CTBSQ01459 385 aa14.39□□□□□ -0.11
HMGN1-208ENST00000443046 MC2RQ01718 297 aa14.39□□□□□ -0.11
HMGN1-208ENST00000443046 NSUN2Q08J23 767 aaKnown RBP eCLIP14.39□□□□□ -0.11
HMGN1-208ENST00000443046 KLRB1Q12918 225 aa14.39□□□□□ -0.11
HMGN1-208ENST00000443046 LACTB2Q53H82 288 aaPredicted RBP14.39□□□□□ -0.11
HMGN1-208ENST00000443046 CFAP58Q5T655 872 aa14.39□□□□□ -0.11
HMGN1-208ENST00000443046 ARHGAP22Q7Z5H3 698 aa14.39□□□□□ -0.11
HMGN1-208ENST00000443046 PHLDB2Q86SQ0 1253 aa14.39□□□□□ -0.11
HMGN1-208ENST00000443046 NLGN4XQ8N0W4 816 aa14.39□□□□□ -0.11
HMGN1-208ENST00000443046 TSEN2Q8NCE0 465 aaKnown RBP14.39□□□□□ -0.11
HMGN1-208ENST00000443046 NLGN4YQ8NFZ3 816 aaPredicted RBP14.39□□□□□ -0.11
HMGN1-208ENST00000443046 SCARF2Q96GP6 870 aaPredicted RBP14.39□□□□□ -0.11
HMGN1-208ENST00000443046 EFHD1Q9BUP0 239 aa14.39□□□□□ -0.11
HMGN1-208ENST00000443046 STK33Q9BYT3 514 aa14.39□□□□□ -0.11
HMGN1-208ENST00000443046 CATSPERBQ9H7T0 1116 aa14.39□□□□□ -0.11
HMGN1-208ENST00000443046 GPN2Q9H9Y4 310 aaPredicted RBP14.39□□□□□ -0.11
HMGN1-208ENST00000443046 MOSPD1Q9UJG1 213 aa14.39□□□□□ -0.11
HMGN1-208ENST00000443046 SUFUQ9UMX1 484 aa14.39□□□□□ -0.11
HMGN1-208ENST00000443046 SLC17A4Q9Y2C5 497 aa14.39□□□□□ -0.11
HMGN1-208ENST00000443046 TMEM184BQ9Y519 407 aaPredicted RBP14.39□□□□□ -0.11
HMGN1-208ENST00000443046 PRR19A6NJB7 356 aa14.38□□□□□ -0.11
HMGN1-208ENST00000443046 FGF10O15520 208 aaPredicted RBP14.38□□□□□ -0.11
HMGN1-208ENST00000443046 MTSS1O43312 755 aa14.38□□□□□ -0.11
HMGN1-208ENST00000443046 PRKAR1AP10644 381 aa14.38□□□□□ -0.11
HMGN1-208ENST00000443046 KRT3P12035 628 aa14.38□□□□□ -0.11
HMGN1-208ENST00000443046 TEAD1P28347 426 aa14.38□□□□□ -0.11
HMGN1-208ENST00000443046 NDST2P52849 883 aa14.38□□□□□ -0.11
HMGN1-208ENST00000443046 POLR2LP62875 67 aaKnown RBP14.38□□□□□ -0.11
HMGN1-208ENST00000443046 GPLD1P80108 840 aa14.38□□□□□ -0.11
HMGN1-208ENST00000443046 FMO1Q01740 532 aa14.38□□□□□ -0.11
HMGN1-208ENST00000443046 ABHD18Q0P651 414 aa14.38□□□□□ -0.11
HMGN1-208ENST00000443046 VWA3BQ502W6 1294 aa14.38□□□□□ -0.11
HMGN1-208ENST00000443046 WDR59Q6PJI9 974 aa14.38□□□□□ -0.11
HMGN1-208ENST00000443046 SLC30A9Q6PML9 568 aa14.38□□□□□ -0.11
HMGN1-208ENST00000443046 HEATR4Q86WZ0 1026 aa14.38□□□□□ -0.11
HMGN1-208ENST00000443046 SLC30A5Q8TAD4 765 aa14.38□□□□□ -0.11
HMGN1-208ENST00000443046 SLC20A1Q8WUM9 679 aa14.38□□□□□ -0.11
HMGN1-208ENST00000443046 ZPBPQ9BS86 351 aa14.38□□□□□ -0.11
HMGN1-208ENST00000443046 LRRC4CQ9HCJ2 640 aa14.38□□□□□ -0.11
HMGN1-208ENST00000443046 FBXO8Q9NRD0 319 aa14.38□□□□□ -0.11
HMGN1-208ENST00000443046 PHPT1Q9NRX4 125 aaPredicted RBP14.38□□□□□ -0.11
HMGN1-208ENST00000443046 FZD10Q9ULW2 581 aa14.38□□□□□ -0.11
HMGN1-208ENST00000443046 CREB3O43889 395 aa14.37□□□□□ -0.11
HMGN1-208ENST00000443046 IVLP07476 585 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms