RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 CDH26Q8IXH8 852 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 OR8H3Q8N146 312 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 PPM1KQ8N3J5 372 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 DEFB119Q8N690 84 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 ZNF511Q8NB15 262 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 ATAD1Q8NBU5 361 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 PIK3C3Q8NEB9 887 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 UBASH3BQ8TF42 649 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 SLC5A11Q8WWX8 675 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 SOCS4Q8WXH5 440 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 LPGAT1Q92604 370 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 RIT1Q92963 219 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 P2RX5Q93086 422 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 RNF31Q96EP0 1072 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 PTCD3Q96EY7 689 aaKnown RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 ZNF512Q96ME7 567 aaPredicted RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 GMLQ99445 158 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 ZNF416Q9BWM5 594 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 PRKD2Q9BZL6 878 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 TINAGL1Q9GZM7 467 aaPredicted RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 PPA2Q9H2U2 334 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 SMOC1Q9H4F8 434 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 CD320Q9NPF0 282 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 PDLIM7Q9NR12 457 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 CATSPERZQ9NTU4 200 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 MTMR4Q9NYA4 1195 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 SIRPGQ9P1W8 387 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 RAB23Q9ULC3 237 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 EIF3LQ9Y262 564 aaKnown RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 FCF1Q9Y324 198 aaKnown RBP2.79□□□□□ -1.96
LIG4-203ENST00000442234 RIPK3Q9Y572 518 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 MYH6P13533 1939 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 SYNGAP1Q96PV0 1343 aa2.79□□□□□ -1.96
LIG4-203ENST00000442234 A0A087X0T9 212 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 A0A1B0GTW7 788 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 FAM237BA0A1B0GVD1 139 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 PRR5-ARHGAP8B1AHC4 643 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 F8W036 122 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 H0Y626 953 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 TFECO14948 347 aaPredicted RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 STX7O15400 261 aaKnown RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 CCNDBP1O95273 360 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 MT-ND3P03897 115 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 UGT2B4P06133 528 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 CD247P20963 164 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 CCNE1P24864 410 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 POU1F1P28069 291 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 SHMT1P34896 483 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 HTR7P34969 479 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 IL15P40933 162 aaPredicted RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 ATXN1P54253 815 aaKnown RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 AIF1P55008 147 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 AQP5P55064 265 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 EEF1A1P68104 462 aaKnown RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 ARHGAP8P85298 464 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 EEF1A2Q05639 463 aaKnown RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 SPIRE1Q08AE8 756 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 ILF2Q12905 390 aaKnown RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 NR5A1Q13285 461 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 TCEA2Q15560 299 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 SGCAQ16586 387 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 CALCRLQ16602 461 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 UBE2SQ16763 222 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 DUSP7Q16829 419 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 AKIRIN2Q53H80 203 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 TCEAL5Q5H9L2 206 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 FIGNQ5HY92 759 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 ZC3H12BQ5HYM0 836 aaKnown RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 C12orf60Q5U649 245 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 EEF1A1P5Q5VTE0 462 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 FAM160B1Q5W0V3 765 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 DCLRE1AQ6PJP8 1040 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 CRTC1Q6UUV9 634 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 KYAT3Q6YP21 454 aaKnown RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 FRMD7Q6ZUT3 714 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 ARMCX2Q7L311 632 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 ERMP1Q7Z2K6 904 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 EFL1Q7Z2Z2 1120 aaKnown RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 LUZP2Q86TE4 346 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 KRT73Q86Y46 540 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 KIF18BQ86Y91 864 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 C12orf56Q8IXR9 622 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 CCDC116Q8IYX3 515 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 CHPFQ8IZ52 775 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 CLYBLQ8N0X4 340 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 LCORLQ8N3X6 602 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 CCDC185Q8N715 623 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 BEND7Q8N7W2 519 aaPredicted RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 TDRD5Q8NAT2 981 aaKnown RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 ZNF527Q8NB42 609 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 DAGLBQ8NCG7 672 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 ZBTB44Q8NCP5 570 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 OR7A2PQ8NGA2 310 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 RASGRP4Q8TDF6 673 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 RAB2BQ8WUD1 216 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 TCEAL3Q969E4 200 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 CMTM5Q96DZ9 223 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 NARS2Q96I59 477 aaKnown RBP2.78□□□□□ -1.96
LIG4-203ENST00000442234 MOGAT1Q96PD6 335 aa2.78□□□□□ -1.96
LIG4-203ENST00000442234 ERGIC2Q96RQ1 377 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms