RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 HCRTO43612 131 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 POLR2IP36954 125 aaKnown RBP11.93□□□□□ -0.5
LTBR-203ENST00000441074 ARL4AP40617 200 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 GLRBP48167 497 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 GSSP48637 474 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 AFF1P51825 1210 aaKnown RBP11.93□□□□□ -0.5
LTBR-203ENST00000441074 SLC12A1Q13621 1099 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 GRM3Q14832 879 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 KCNJ8Q15842 424 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 INAQ16352 499 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 CYBRD1Q53TN4 286 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 PPP1R26Q5T8A7 1209 aaPredicted RBP11.93□□□□□ -0.5
LTBR-203ENST00000441074 AGAP7PQ5VUJ5 663 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 GDF6Q6KF10 455 aaPredicted RBP11.93□□□□□ -0.5
LTBR-203ENST00000441074 LAYNQ6UX15 382 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 KCNMB4Q86W47 210 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 CMTR2Q8IYT2 770 aaKnown RBP11.93□□□□□ -0.5
LTBR-203ENST00000441074 OFCC1Q8IZS5 231 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 ABHD11Q8NFV4 315 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 SNX19Q92543 992 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 ROPN1LQ96C74 230 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 NRBF2Q96F24 287 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 KIF12Q96FN5 646 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 SH3YL1Q96HL8 342 aaPredicted RBP11.93□□□□□ -0.5
LTBR-203ENST00000441074 LPIN3Q9BQK8 851 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 SNX25Q9H3E2 840 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 FANCEQ9HB96 536 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 TBC1D13Q9NVG8 400 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 SMPD3Q9NY59 655 aaPredicted RBP11.93□□□□□ -0.5
LTBR-203ENST00000441074 IFT80Q9P2H3 777 aaPredicted RBP11.93□□□□□ -0.5
LTBR-203ENST00000441074 VANGL2Q9ULK5 521 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 OAZ3Q9UMX2 235 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 USP3Q9Y6I4 520 aa11.93□□□□□ -0.5
LTBR-203ENST00000441074 LSM1O15116 133 aaKnown RBP11.92□□□□□ -0.5
LTBR-203ENST00000441074 DUSP11O75319 330 aaKnown RBP11.92□□□□□ -0.5
LTBR-203ENST00000441074 PSMA4P25789 261 aaKnown RBP11.92□□□□□ -0.5
LTBR-203ENST00000441074 GRK4P32298 578 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 IDUAP35475 653 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 OPRL1P41146 370 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 ATP6V0D1P61421 351 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 PSMD5Q16401 504 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 ARHGAP17Q68EM7 881 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 STRADAQ7RTN6 431 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 PIWIL4Q7Z3Z4 852 aaKnown RBP11.92□□□□□ -0.5
LTBR-203ENST00000441074 SLC7A5P1Q8MH63 180 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 ZNF567Q8N184 647 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 TTC30BQ8N4P2 665 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 KCTD4Q8WVF5 259 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 CTRCQ99895 268 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 TPK1Q9H3S4 243 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 MEAF6Q9HAF1 191 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 MAGEE1Q9HCI5 957 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 MTF2Q9Y483 593 aaPredicted RBP11.92□□□□□ -0.5
LTBR-203ENST00000441074 SNX9Q9Y5X1 595 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 ZNF236Q9UL36 1845 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 SMIM35A0A1B0GVV1 85 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 MAGEB16A2A368 324 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 PHGDHO43175 533 aaKnown RBP11.92□□□□□ -0.5
LTBR-203ENST00000441074 GPC4O75487 556 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 ASGR1P07306 291 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 SLC35E2BP0CK96 405 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 FCGR1AP12314 374 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 PTPN2P17706 415 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 MAPK10P53779 464 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 USP10Q14694 798 aaKnown RBP11.92□□□□□ -0.5
LTBR-203ENST00000441074 KCNA10Q16322 511 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 NDUFA5Q16718 116 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 TSTD2Q5T7W7 516 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 MFSD14CQ5VZR4 134 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 GTF2IRD2BQ6EKJ0 949 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 TMEM214Q6NUQ4 689 aaKnown RBP11.92□□□□□ -0.5
LTBR-203ENST00000441074 CNSTQ6PJW8 725 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 GTF2IRD2Q86UP8 949 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 UNC93AQ86WB7 457 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 CENPLQ8N0S6 344 aaPredicted RBP11.92□□□□□ -0.5
LTBR-203ENST00000441074 SFRP1Q8N474 314 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 C12orf29Q8N999 325 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 ARRDC4Q8NCT1 418 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 HPS1Q92902 700 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 MYRFLQ96LU7 910 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 CEP41Q9BYV8 373 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 RHOBTB2Q9BYZ6 727 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 HMG20AQ9NP66 347 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 IARS2Q9NSE4 1012 aaKnown RBP11.92□□□□□ -0.5
LTBR-203ENST00000441074 NSMCE4AQ9NXX6 385 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 GTSE1Q9NYZ3 720 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 SEPT10Q9P0V9 454 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 GMPR2Q9P2T1 348 aaKnown RBP11.92□□□□□ -0.5
LTBR-203ENST00000441074 XPR1Q9UBH6 696 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 ERVK-11Q9UQG0 969 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 DERAQ9Y315 318 aa11.92□□□□□ -0.5
LTBR-203ENST00000441074 EI24O14681 340 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 MFSD11O43934 449 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 JRKO75564 520 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 GOT1P17174 413 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 HPCAL1P37235 193 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 ACADSBP45954 432 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 YAP1P46937 504 aaKnown RBP11.91□□□□□ -0.5
LTBR-203ENST00000441074 DNAJB13P59910 316 aa11.91□□□□□ -0.5
LTBR-203ENST00000441074 ADARB1P78563 741 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms