RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 CUZD1Q86UP6 607 aa8.21□□□□□ -1.1
SPIRE1-204ENST00000440472 SNX32Q86XE0 403 aa8.21□□□□□ -1.1
SPIRE1-204ENST00000440472 HERC6Q8IVU3 1022 aa8.21□□□□□ -1.1
SPIRE1-204ENST00000440472 FAM217AQ8IXS0 508 aa8.21□□□□□ -1.1
SPIRE1-204ENST00000440472 DSELQ8IZU8 1212 aa8.21□□□□□ -1.1
SPIRE1-204ENST00000440472 CLYBLQ8N0X4 340 aa8.21□□□□□ -1.1
SPIRE1-204ENST00000440472 CCNYL1Q8N7R7 359 aa8.21□□□□□ -1.1
SPIRE1-204ENST00000440472 ZNF461Q8TAF7 563 aa8.21□□□□□ -1.1
SPIRE1-204ENST00000440472 BCL7CQ8WUZ0 217 aaPredicted RBP8.21□□□□□ -1.1
SPIRE1-204ENST00000440472 ANKRD49Q8WVL7 239 aa8.21□□□□□ -1.1
SPIRE1-204ENST00000440472 KIAA1191Q96A73 305 aa8.21□□□□□ -1.1
SPIRE1-204ENST00000440472 IGSF21Q96ID5 467 aa8.21□□□□□ -1.1
SPIRE1-204ENST00000440472 DNAJC1Q96KC8 554 aaKnown RBP8.21□□□□□ -1.1
SPIRE1-204ENST00000440472 TOX2Q96NM4 488 aa8.21□□□□□ -1.1
SPIRE1-204ENST00000440472 HERC2P3Q9BVR0 1158 aa8.21□□□□□ -1.1
SPIRE1-204ENST00000440472 CINPQ9BW66 212 aaPredicted RBP8.21□□□□□ -1.1
SPIRE1-204ENST00000440472 TDRD1Q9BXT4 1180 aaKnown RBP8.21□□□□□ -1.1
SPIRE1-204ENST00000440472 MARCH4Q9P2E8 410 aaPredicted RBP8.21□□□□□ -1.1
SPIRE1-204ENST00000440472 COPG1Q9Y678 874 aaKnown RBP8.21□□□□□ -1.1
SPIRE1-204ENST00000440472 ZFP37Q9Y6Q3 630 aaPredicted RBP8.21□□□□□ -1.1
SPIRE1-204ENST00000440472 MICAL3Q7RTP6 2002 aa8.21□□□□□ -1.1
SPIRE1-204ENST00000440472 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 C2orf81A6NN90 581 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 STX16-NPEPL1H3BU86 382 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 STX16O14662 325 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 COCHO43405 550 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 KERAO60938 352 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 VPS4BO75351 444 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 SOAT2O75908 522 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 STC2O76061 302 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 PRLP01236 227 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 SOD2P04179 222 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 ZNF37AP17032 561 aaPredicted RBP8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 KCNA5P22460 613 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 GATMP50440 423 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 ARPP19P56211 112 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 GRIK2Q13002 908 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 ZNF177Q13360 481 aaPredicted RBP8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 TCTN1Q2MV58 587 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 UNC50Q53HI1 259 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 C1orf53Q5VUE5 145 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 BNC2Q6ZN30 1099 aaPredicted RBP8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 RAB44Q7Z6P3 723 aaPredicted RBP8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 ZNF354CQ86Y25 554 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 NKAPQ8N5F7 415 aaKnown RBP8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 GPR152Q8TDT2 470 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 GIPC2Q8TF65 315 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 TSPEARQ8WU66 669 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 LPGAT1Q92604 370 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 USP13Q92995 863 aaPredicted RBP8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 PPP2R3CQ969Q6 453 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 MIEF2Q96C03 454 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 DUS3LQ96G46 650 aaKnown RBP8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 PRICKLE1Q96MT3 831 aaPredicted RBP8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 BTBD9Q96Q07 612 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 ATOH8Q96SQ7 321 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 NDNQ99608 321 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 SPATS2LQ9NUQ6 558 aaKnown RBP8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 POLR3BQ9NW08 1133 aaPredicted RBP8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 DNMT3BQ9UBC3 853 aaKnown RBP8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 PSMD13Q9UNM6 376 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 TRAF6Q9Y4K3 522 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 OAS3Q9Y6K5 1087 aaKnown RBP8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 WASF2Q9Y6W5 498 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 GBF1Q92538 1859 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 LOC100653049A0A140TA62 436 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 BBIP1A8MTZ0 92 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 FKTNO75072 461 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 ZMPSTE24O75844 475 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 BCAS2O75934 225 aaPredicted RBP8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 KRT34O76011 436 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 RHOCP08134 193 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 HMBSP08397 361 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 LPOP22079 712 aaPredicted RBP8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 RFC2P35250 354 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 CCR10P46092 362 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 CSNK1DP48730 415 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 ALDH7A1P49419 539 aaKnown RBP8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 TRAP1Q12931 704 aaKnown RBP8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 RAB33AQ14088 237 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 UGT3A2Q3SY77 523 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 COQ5Q5HYK3 327 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 AARS2Q5JTZ9 985 aaKnown RBP8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 C8orf82Q6P1X6 216 aaPredicted RBP8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 TXNDC11Q6PKC3 985 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 LARP4Q71RC2 724 aaKnown RBP eCLIP8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 EFL1Q7Z2Z2 1120 aaKnown RBP8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 CIR1Q86X95 450 aaPredicted RBP8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 PLCD3Q8N3E9 789 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 RIN3Q8TB24 985 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 STAG3L4Q8TBR4 150 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 DTX3LQ8TDB6 740 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 GATA6Q92908 595 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 PDLIM5Q96HC4 596 aaKnown RBP8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 CCT7Q99832 543 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 ECSITQ9BQ95 431 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 CLSTN3Q9BQT9 956 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 ADGRE3Q9BY15 652 aa8.2□□□□□ -1.1
SPIRE1-204ENST00000440472 PAK6Q9NQU5 681 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms