RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 FUBP1Q96AE4 644 aaKnown RBP13.75□□□□□ -0.21
LTBR-202ENST00000440421 WDR92Q96MX6 357 aa13.75□□□□□ -0.21
LTBR-202ENST00000440421 DESI2Q9BSY9 194 aa13.75□□□□□ -0.21
LTBR-202ENST00000440421 DUSP23Q9BVJ7 150 aa13.75□□□□□ -0.21
LTBR-202ENST00000440421 HEMGNQ9BXL5 484 aa13.75□□□□□ -0.21
LTBR-202ENST00000440421 CLPBQ9H078 707 aa13.75□□□□□ -0.21
LTBR-202ENST00000440421 PCDH9Q9HC56 1237 aa13.75□□□□□ -0.21
LTBR-202ENST00000440421 GOLGA6AQ9NYA3 693 aa13.75□□□□□ -0.21
LTBR-202ENST00000440421 KLQ9UEF7 1012 aa13.75□□□□□ -0.21
LTBR-202ENST00000440421 CD84Q9UIB8 345 aa13.75□□□□□ -0.21
LTBR-202ENST00000440421 PPIL1Q9Y3C6 166 aa13.75□□□□□ -0.21
LTBR-202ENST00000440421 CSNK1G3Q9Y6M4 447 aa13.75□□□□□ -0.21
LTBR-202ENST00000440421 CHD8Q9HCK8 2581 aa13.74□□□□□ -0.21
LTBR-202ENST00000440421 A0A0U1RQJ8 604 aa13.74□□□□□ -0.21
LTBR-202ENST00000440421 TMEM202A6NGA9 273 aa13.74□□□□□ -0.21
LTBR-202ENST00000440421 RASGRP1O95267 797 aa13.74□□□□□ -0.21
LTBR-202ENST00000440421 PRLP01236 227 aa13.74□□□□□ -0.21
LTBR-202ENST00000440421 PROS1P07225 676 aa13.74□□□□□ -0.21
LTBR-202ENST00000440421 ANXA6P08133 673 aa13.74□□□□□ -0.21
LTBR-202ENST00000440421 C1SP09871 688 aa13.74□□□□□ -0.21
LTBR-202ENST00000440421 CTSEP14091 401 aa13.74□□□□□ -0.21
LTBR-202ENST00000440421 TSHRP16473 764 aa13.74□□□□□ -0.21
LTBR-202ENST00000440421 TGM2P21980 687 aa13.74□□□□□ -0.21
LTBR-202ENST00000440421 ACP1P24666 158 aa13.74□□□□□ -0.21
LTBR-202ENST00000440421 NR2C2P49116 596 aa13.74□□□□□ -0.21
LTBR-202ENST00000440421 BLKP51451 505 aa13.74□□□□□ -0.21
LTBR-202ENST00000440421 HK3P52790 923 aa13.74□□□□□ -0.21
LTBR-202ENST00000440421 SMAD1Q15797 465 aaKnown RBP13.74□□□□□ -0.21
LTBR-202ENST00000440421 ESRP1Q6NXG1 681 aaKnown RBP13.74□□□□□ -0.21
LTBR-202ENST00000440421 ZCCHC8Q6NZY4 707 aaKnown RBP13.74□□□□□ -0.21
LTBR-202ENST00000440421 BZW1Q7L1Q6 419 aaKnown RBP13.74□□□□□ -0.21
LTBR-202ENST00000440421 KDELC2Q7Z4H8 507 aa13.74□□□□□ -0.21
LTBR-202ENST00000440421 ZC3H18Q86VM9 953 aaKnown RBP13.74□□□□□ -0.21
LTBR-202ENST00000440421 CBARPQ8N350 705 aaPredicted RBP13.74□□□□□ -0.21
LTBR-202ENST00000440421 ATL2Q8NHH9 583 aa13.74□□□□□ -0.21
LTBR-202ENST00000440421 EXD1Q8NHP7 514 aa13.74□□□□□ -0.21
LTBR-202ENST00000440421 KIAA1524Q8TCG1 905 aa13.74□□□□□ -0.21
LTBR-202ENST00000440421 TFB1MQ8WVM0 346 aaKnown RBP13.74□□□□□ -0.21
LTBR-202ENST00000440421 P3H4Q92791 437 aa13.74□□□□□ -0.21
LTBR-202ENST00000440421 DTD2Q96FN9 168 aa13.74□□□□□ -0.21
LTBR-202ENST00000440421 PDXPQ96GD0 296 aa13.74□□□□□ -0.21
LTBR-202ENST00000440421 RBM41Q96IZ5 413 aaKnown RBP13.74□□□□□ -0.21
LTBR-202ENST00000440421 RBM15Q96T37 977 aaKnown RBP eCLIP13.74□□□□□ -0.21
LTBR-202ENST00000440421 LGR4Q9BXB1 951 aa13.74□□□□□ -0.21
LTBR-202ENST00000440421 BRD8Q9H0E9 1235 aa13.74□□□□□ -0.21
LTBR-202ENST00000440421 WDR26Q9H7D7 661 aa13.74□□□□□ -0.21
LTBR-202ENST00000440421 MRPL40Q9NQ50 206 aaKnown RBP13.74□□□□□ -0.21
LTBR-202ENST00000440421 TRIM10Q9UDY6 481 aa13.74□□□□□ -0.21
LTBR-202ENST00000440421 MOSPD1Q9UJG1 213 aa13.74□□□□□ -0.21
LTBR-202ENST00000440421 ACACBO00763 2458 aa13.74□□□□□ -0.21
LTBR-202ENST00000440421 PLXNB3Q9ULL4 1909 aa13.74□□□□□ -0.21
LTBR-202ENST00000440421 LY6G6EA0A0G2JKS1 128 aa13.73□□□□□ -0.21
LTBR-202ENST00000440421 MACROD2A1Z1Q3 448 aa13.73□□□□□ -0.21
LTBR-202ENST00000440421 CAPN8A6NHC0 703 aa13.73□□□□□ -0.21
LTBR-202ENST00000440421 BTNL10A8MVZ5 291 aa13.73□□□□□ -0.21
LTBR-202ENST00000440421 GOLGA6L6A8MZA4 724 aa13.73□□□□□ -0.21
LTBR-202ENST00000440421 PSMD11O00231 422 aa13.73□□□□□ -0.21
LTBR-202ENST00000440421 YY2O15391 372 aa13.73□□□□□ -0.21
LTBR-202ENST00000440421 PJA2O43164 708 aa13.73□□□□□ -0.21
LTBR-202ENST00000440421 TNFP01375 233 aa13.73□□□□□ -0.21
LTBR-202ENST00000440421 CKMT1AP12532 417 aa13.73□□□□□ -0.21
LTBR-202ENST00000440421 CTNNA1P35221 906 aaKnown RBP13.73□□□□□ -0.21
LTBR-202ENST00000440421 TRIM23P36406 574 aa13.73□□□□□ -0.21
LTBR-202ENST00000440421 KIAA1024LP59773 190 aa13.73□□□□□ -0.21
LTBR-202ENST00000440421 PTSQ03393 145 aa13.73□□□□□ -0.21
LTBR-202ENST00000440421 ILKQ13418 452 aa13.73□□□□□ -0.21
LTBR-202ENST00000440421 GALNT3Q14435 633 aa13.73□□□□□ -0.21
LTBR-202ENST00000440421 PRKD1Q15139 912 aaPredicted RBP13.73□□□□□ -0.21
LTBR-202ENST00000440421 PCSK7Q16549 785 aa13.73□□□□□ -0.21
LTBR-202ENST00000440421 CDKN3Q16667 212 aa13.73□□□□□ -0.21
LTBR-202ENST00000440421 HES3Q5TGS1 186 aa13.73□□□□□ -0.21
LTBR-202ENST00000440421 RAET1GQ6H3X3 334 aa13.73□□□□□ -0.21
LTBR-202ENST00000440421 NT5DC3Q86UY8 548 aa13.73□□□□□ -0.21
LTBR-202ENST00000440421 TMPRSS12Q86WS5 348 aa13.73□□□□□ -0.21
LTBR-202ENST00000440421 HEATR4Q86WZ0 1026 aa13.73□□□□□ -0.21
LTBR-202ENST00000440421 FAM181AQ8N9Y4 354 aa13.73□□□□□ -0.21
LTBR-202ENST00000440421 OR56A4Q8NGH8 313 aa13.73□□□□□ -0.21
LTBR-202ENST00000440421 OR1E3Q8WZA6 343 aa13.73□□□□□ -0.21
LTBR-202ENST00000440421 CALR3Q96L12 384 aaKnown RBP13.73□□□□□ -0.21
LTBR-202ENST00000440421 SUDS3Q9H7L9 328 aaPredicted RBP13.73□□□□□ -0.21
LTBR-202ENST00000440421 FGF22Q9HCT0 170 aa13.73□□□□□ -0.21
LTBR-202ENST00000440421 DOLKQ9UPQ8 538 aa13.73□□□□□ -0.21
LTBR-202ENST00000440421 PCDHA3Q9Y5H8 950 aa13.73□□□□□ -0.21
LTBR-202ENST00000440421 U3KQA8 63 aa13.73□□□□□ -0.21
LTBR-202ENST00000440421 TPRP12270 2363 aaKnown RBP13.73□□□□□ -0.21
LTBR-202ENST00000440421 CEP295Q9C0D2 2601 aa13.73□□□□□ -0.21
LTBR-202ENST00000440421 LRP4O75096 1905 aa13.72□□□□□ -0.21
LTBR-202ENST00000440421 AKAP13Q12802 2813 aa13.72□□□□□ -0.21
LTBR-202ENST00000440421 CPED1A4D0V7 1026 aa13.72□□□□□ -0.21
LTBR-202ENST00000440421 GRID2IPA4D2P6 1211 aa13.72□□□□□ -0.21
LTBR-202ENST00000440421 LMO7DNF2Z398 122 aa13.72□□□□□ -0.21
LTBR-202ENST00000440421 TPP1O14773 563 aa13.72□□□□□ -0.21
LTBR-202ENST00000440421 CLDN7O95471 211 aa13.72□□□□□ -0.21
LTBR-202ENST00000440421 CDK4P11802 303 aa13.72□□□□□ -0.21
LTBR-202ENST00000440421 MYCLP1P12525 358 aaPredicted RBP13.72□□□□□ -0.21
LTBR-202ENST00000440421 JUPP14923 745 aa13.72□□□□□ -0.21
LTBR-202ENST00000440421 ZNF30P17039 623 aa13.72□□□□□ -0.21
LTBR-202ENST00000440421 KELP23276 732 aa13.72□□□□□ -0.21
LTBR-202ENST00000440421 PTPN3P26045 913 aa13.72□□□□□ -0.21
LTBR-202ENST00000440421 DUSP3P51452 185 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms