RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 CCNB1P14635 433 aa19.87■□□□□ 0.77
SHROOM1-204ENST00000440118 ETV3P41162 512 aa19.87■□□□□ 0.77
SHROOM1-204ENST00000440118 DSC2Q02487 901 aa19.87■□□□□ 0.77
SHROOM1-204ENST00000440118 RTP5Q14D33 572 aa19.87■□□□□ 0.77
SHROOM1-204ENST00000440118 LVRNQ6Q4G3 990 aa19.87■□□□□ 0.77
SHROOM1-204ENST00000440118 LRRC69Q6ZNQ3 347 aa19.87■□□□□ 0.77
SHROOM1-204ENST00000440118 TAF8Q7Z7C8 310 aa19.87■□□□□ 0.77
SHROOM1-204ENST00000440118 CCDC13Q8IYE1 715 aa19.87■□□□□ 0.77
SHROOM1-204ENST00000440118 SDR16C5Q8N3Y7 309 aa19.87■□□□□ 0.77
SHROOM1-204ENST00000440118 KYQ8NBH2 561 aa19.87■□□□□ 0.77
SHROOM1-204ENST00000440118 LRRN4Q8WUT4 740 aa19.87■□□□□ 0.77
SHROOM1-204ENST00000440118 RAPGEF5Q92565 580 aa19.87■□□□□ 0.77
SHROOM1-204ENST00000440118 FAF2Q96CS3 445 aa19.87■□□□□ 0.77
SHROOM1-204ENST00000440118 DTD2Q96FN9 168 aa19.87■□□□□ 0.77
SHROOM1-204ENST00000440118 COQ10AQ96MF6 247 aa19.87■□□□□ 0.77
SHROOM1-204ENST00000440118 CYP4F12Q9HCS2 524 aa19.87■□□□□ 0.77
SHROOM1-204ENST00000440118 FGF22Q9HCT0 170 aa19.87■□□□□ 0.77
SHROOM1-204ENST00000440118 PADI4Q9UM07 663 aa19.87■□□□□ 0.77
SHROOM1-204ENST00000440118 DGKBQ9Y6T7 804 aa19.87■□□□□ 0.77
SHROOM1-204ENST00000440118 TMEM202A6NGA9 273 aa19.86■□□□□ 0.77
SHROOM1-204ENST00000440118 APOL1O14791 398 aa19.86■□□□□ 0.77
SHROOM1-204ENST00000440118 BRINP1O60477 761 aa19.86■□□□□ 0.77
SHROOM1-204ENST00000440118 USP12O75317 370 aa19.86■□□□□ 0.77
SHROOM1-204ENST00000440118 MYCLP1P12525 358 aaPredicted RBP19.86■□□□□ 0.77
SHROOM1-204ENST00000440118 LHCGRP22888 699 aa19.86■□□□□ 0.77
SHROOM1-204ENST00000440118 CES1P23141 567 aa19.86■□□□□ 0.77
SHROOM1-204ENST00000440118 ACTN2P35609 894 aa19.86■□□□□ 0.77
SHROOM1-204ENST00000440118 CDCP2Q5VXM1 449 aa19.86■□□□□ 0.77
SHROOM1-204ENST00000440118 RBM44Q6ZP01 1051 aaKnown RBP19.86■□□□□ 0.77
SHROOM1-204ENST00000440118 HSD11B1LQ7Z5J1 315 aa19.86■□□□□ 0.77
SHROOM1-204ENST00000440118 TSPAN33Q86UF1 283 aa19.86■□□□□ 0.77
SHROOM1-204ENST00000440118 HEATR4Q86WZ0 1026 aa19.86■□□□□ 0.77
SHROOM1-204ENST00000440118 RFX6Q8HWS3 928 aa19.86■□□□□ 0.77
SHROOM1-204ENST00000440118 PQLC3Q8N755 202 aa19.86■□□□□ 0.77
SHROOM1-204ENST00000440118 OR1E3Q8WZA6 343 aa19.86■□□□□ 0.77
SHROOM1-204ENST00000440118 MAML1Q92585 1016 aa19.86■□□□□ 0.77
SHROOM1-204ENST00000440118 HDAC11Q96DB2 347 aa19.86■□□□□ 0.77
SHROOM1-204ENST00000440118 SCRN2Q96FV2 425 aa19.86■□□□□ 0.77
SHROOM1-204ENST00000440118 RNF157Q96PX1 679 aa19.86■□□□□ 0.77
SHROOM1-204ENST00000440118 CCDC3Q9BQI4 270 aa19.86■□□□□ 0.77
SHROOM1-204ENST00000440118 MRPL40Q9NQ50 206 aaKnown RBP19.86■□□□□ 0.77
SHROOM1-204ENST00000440118 AMACRQ9UHK6 382 aa19.86■□□□□ 0.77
SHROOM1-204ENST00000440118 RRP8O43159 456 aaKnown RBP19.85■□□□□ 0.77
SHROOM1-204ENST00000440118 HLA-DQB2P05538 268 aa19.85■□□□□ 0.77
SHROOM1-204ENST00000440118 GM2AP17900 193 aa19.85■□□□□ 0.77
SHROOM1-204ENST00000440118 TGM2P21980 687 aa19.85■□□□□ 0.77
SHROOM1-204ENST00000440118 NOP2P46087 812 aaKnown RBP19.85■□□□□ 0.77
SHROOM1-204ENST00000440118 GABREP78334 506 aa19.85■□□□□ 0.77
SHROOM1-204ENST00000440118 AP1B1Q10567 949 aa19.85■□□□□ 0.77
SHROOM1-204ENST00000440118 SPIDRQ14159 915 aa19.85■□□□□ 0.77
SHROOM1-204ENST00000440118 COL28A1Q2UY09 1125 aa19.85■□□□□ 0.77
SHROOM1-204ENST00000440118 PERM1Q5SV97 790 aa19.85■□□□□ 0.77
SHROOM1-204ENST00000440118 LRRC66Q68CR7 880 aa19.85■□□□□ 0.77
SHROOM1-204ENST00000440118 NYAP1Q6ZVC0 841 aa19.85■□□□□ 0.77
SHROOM1-204ENST00000440118 LPCAT1Q8NF37 534 aa19.85■□□□□ 0.77
SHROOM1-204ENST00000440118 WDR48Q8TAF3 677 aa19.85■□□□□ 0.77
SHROOM1-204ENST00000440118 TSGA13Q96PP4 275 aa19.85■□□□□ 0.77
SHROOM1-204ENST00000440118 MCCC1Q96RQ3 725 aaPredicted RBP19.85■□□□□ 0.77
SHROOM1-204ENST00000440118 RBM15Q96T37 977 aaKnown RBP eCLIP19.85■□□□□ 0.777e-7■■■□□ 17.3
SHROOM1-204ENST00000440118 CARS2Q9HA77 564 aaKnown RBP19.85■□□□□ 0.77
SHROOM1-204ENST00000440118 DTLQ9NZJ0 730 aa19.85■□□□□ 0.77
SHROOM1-204ENST00000440118 DNPEPQ9ULA0 475 aa19.85■□□□□ 0.77
SHROOM1-204ENST00000440118 CHKBQ9Y259 395 aa19.85■□□□□ 0.77
SHROOM1-204ENST00000440118 ITPR1Q14643 2758 aa19.85■□□□□ 0.77
SHROOM1-204ENST00000440118 PRSS38A1L453 326 aa19.84■□□□□ 0.77
SHROOM1-204ENST00000440118 B4DGG1 531 aa19.84■□□□□ 0.77
SHROOM1-204ENST00000440118 TNFRSF10CO14798 259 aa19.84■□□□□ 0.77
SHROOM1-204ENST00000440118 PPP1R12AO14974 1030 aaPredicted RBP19.84■□□□□ 0.77
SHROOM1-204ENST00000440118 MTA2O94776 668 aa19.84■□□□□ 0.77
SHROOM1-204ENST00000440118 MPOP05164 745 aa19.84■□□□□ 0.77
SHROOM1-204ENST00000440118 PDHA1P08559 390 aa19.84■□□□□ 0.77
SHROOM1-204ENST00000440118 HOXC4P09017 264 aaPredicted RBP19.84■□□□□ 0.77
SHROOM1-204ENST00000440118 ZFXP17010 805 aaPredicted RBP19.84■□□□□ 0.77
SHROOM1-204ENST00000440118 SLC1A1P43005 524 aa19.84■□□□□ 0.77
SHROOM1-204ENST00000440118 ABCG1P45844 678 aa19.84■□□□□ 0.77
SHROOM1-204ENST00000440118 GPR1P46091 355 aa19.84■□□□□ 0.77
SHROOM1-204ENST00000440118 DYNLT1P63172 113 aa19.84■□□□□ 0.77
SHROOM1-204ENST00000440118 DOK6Q6PKX4 331 aa19.84■□□□□ 0.77
SHROOM1-204ENST00000440118 Q6ZVL8 140 aa19.84■□□□□ 0.77
SHROOM1-204ENST00000440118 RHOT1Q8IXI2 618 aa19.84■□□□□ 0.77
SHROOM1-204ENST00000440118 FAM46DQ8NEK8 389 aa19.84■□□□□ 0.77
SHROOM1-204ENST00000440118 PIH1D2Q8WWB5 315 aa19.84■□□□□ 0.77
SHROOM1-204ENST00000440118 FATE1Q969F0 183 aa19.84■□□□□ 0.77
SHROOM1-204ENST00000440118 CCDC74AQ96AQ1 378 aa19.84■□□□□ 0.77
SHROOM1-204ENST00000440118 LGMNQ99538 433 aa19.84■□□□□ 0.77
SHROOM1-204ENST00000440118 LGR4Q9BXB1 951 aa19.84■□□□□ 0.77
SHROOM1-204ENST00000440118 TDRD1Q9BXT4 1180 aaKnown RBP19.84■□□□□ 0.77
SHROOM1-204ENST00000440118 LUC7LQ9NQ29 371 aaKnown RBP19.84■□□□□ 0.77
SHROOM1-204ENST00000440118 DDX56Q9NY93 547 aaKnown RBP19.84■□□□□ 0.77
SHROOM1-204ENST00000440118 SEPT10Q9P0V9 454 aa19.84■□□□□ 0.77
SHROOM1-204ENST00000440118 CD84Q9UIB8 345 aa19.84■□□□□ 0.77
SHROOM1-204ENST00000440118 INTUQ9ULD6 942 aa19.84■□□□□ 0.77
SHROOM1-204ENST00000440118 ARHGEF17Q96PE2 2063 aaPredicted RBP19.83■□□□□ 0.77
SHROOM1-204ENST00000440118 CELSR3Q9NYQ7 3312 aa19.83■□□□□ 0.77
SHROOM1-204ENST00000440118 A0A0J9YYE9 177 aa19.83■□□□□ 0.77
SHROOM1-204ENST00000440118 KCNK1O00180 336 aa19.83■□□□□ 0.77
SHROOM1-204ENST00000440118 TCEA3O75764 348 aa19.83■□□□□ 0.77
SHROOM1-204ENST00000440118 JCHAINP01591 159 aa19.83■□□□□ 0.77
SHROOM1-204ENST00000440118 TRBC1P01850 177 aa19.83■□□□□ 0.77
SHROOM1-204ENST00000440118 ZNF30P17039 623 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms