RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 HIDE1A8MVS5 230 aa11.78□□□□□ -0.52
SMAD3-202ENST00000439724 H7C0S8 307 aa11.78□□□□□ -0.52
SMAD3-202ENST00000439724 TLL1O43897 1013 aa11.78□□□□□ -0.52
SMAD3-202ENST00000439724 CCDC166P0CW27 439 aa11.78□□□□□ -0.52
SMAD3-202ENST00000439724 HOXA9P31269 272 aa11.78□□□□□ -0.52
SMAD3-202ENST00000439724 CCR2P41597 374 aa11.78□□□□□ -0.52
SMAD3-202ENST00000439724 MAPK8P45983 427 aa11.78□□□□□ -0.52
SMAD3-202ENST00000439724 LBX1P52954 281 aa11.78□□□□□ -0.52
SMAD3-202ENST00000439724 NAGLUP54802 743 aa11.78□□□□□ -0.52
SMAD3-202ENST00000439724 RPL26P61254 145 aaKnown RBP11.78□□□□□ -0.52
SMAD3-202ENST00000439724 PLPP4Q5VZY2 271 aa11.78□□□□□ -0.52
SMAD3-202ENST00000439724 EPGNQ6UW88 154 aa11.78□□□□□ -0.52
SMAD3-202ENST00000439724 PIWIL4Q7Z3Z4 852 aaKnown RBP11.78□□□□□ -0.52
SMAD3-202ENST00000439724 TREML1Q86YW5 311 aa11.78□□□□□ -0.52
SMAD3-202ENST00000439724 SPATA6LQ8N4H0 392 aa11.78□□□□□ -0.52
SMAD3-202ENST00000439724 DNAJC5GQ8N7S2 189 aa11.78□□□□□ -0.52
SMAD3-202ENST00000439724 PNPLA1Q8N8W4 532 aa11.78□□□□□ -0.52
SMAD3-202ENST00000439724 SPPL3Q8TCT6 385 aa11.78□□□□□ -0.52
SMAD3-202ENST00000439724 ANKRD49Q8WVL7 239 aa11.78□□□□□ -0.52
SMAD3-202ENST00000439724 MYO19Q96H55 970 aa11.78□□□□□ -0.52
SMAD3-202ENST00000439724 TBC1D10AQ9BXI6 508 aa11.78□□□□□ -0.52
SMAD3-202ENST00000439724 TLR9Q9NR96 1032 aa11.78□□□□□ -0.52
SMAD3-202ENST00000439724 POLR3BQ9NW08 1133 aaPredicted RBP11.78□□□□□ -0.52
SMAD3-202ENST00000439724 ARMCX1Q9P291 453 aa11.78□□□□□ -0.52
SMAD3-202ENST00000439724 RPL26L1Q9UNX3 145 aaKnown RBP11.78□□□□□ -0.52
SMAD3-202ENST00000439724 VPS9D1Q9Y2B5 631 aa11.78□□□□□ -0.52
SMAD3-202ENST00000439724 CRYL1Q9Y2S2 319 aa11.78□□□□□ -0.52
SMAD3-202ENST00000439724 SLC4A7Q9Y6M7 1214 aa11.78□□□□□ -0.52
SMAD3-202ENST00000439724 SLCO1B7G3V0H7 640 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 PGLSO95336 258 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 PIGNO95427 931 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 ATP6V1G2O95670 118 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 MT-CO1P00395 513 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 CYBBP04839 570 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 CHRNGP07510 517 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 ESRRAP11474 423 aaPredicted RBP11.77□□□□□ -0.52
SMAD3-202ENST00000439724 AOC1P19801 751 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 MPSTP25325 297 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 PMLP29590 882 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 RPL14P50914 215 aaKnown RBP11.77□□□□□ -0.52
SMAD3-202ENST00000439724 ALDH18A1P54886 795 aaKnown RBP11.77□□□□□ -0.52
SMAD3-202ENST00000439724 TIAL1Q01085 375 aaKnown RBP eCLIP11.77□□□□□ -0.52
SMAD3-202ENST00000439724 SLC20A2Q08357 652 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 USP4Q13107 963 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 SNCBQ16143 134 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 PLEKHG6Q3KR16 790 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 ARL13AQ5H913 290 aaPredicted RBP11.77□□□□□ -0.52
SMAD3-202ENST00000439724 CFAP157Q5JU67 520 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 ATXN7L2Q5T6C5 722 aaPredicted RBP11.77□□□□□ -0.52
SMAD3-202ENST00000439724 GPR158Q5T848 1215 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 ARMC12Q5T9G4 340 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 TMEM207Q6UWW9 146 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 SLC22A9Q8IVM8 553 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 CMTM8Q8IZV2 173 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 LSMEM2Q8N112 164 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 LEMD2Q8NC56 503 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 SH3RF2Q8TEC5 729 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 POF1BQ8WVV4 589 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 LPGAT1Q92604 370 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 BHMTQ93088 406 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 LMLNQ96KR4 655 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 C19orf43Q9BQ61 176 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 BTBD10Q9BSF8 475 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 POMKQ9H5K3 350 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 COG4Q9H9E3 785 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 MAGEE1Q9HCI5 957 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 ABCB8Q9NUT2 735 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 HCFC1R1Q9NWW0 138 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 TAGLN3Q9UI15 199 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 CLEC4EQ9ULY5 219 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 ZNF711Q9Y462 761 aa11.77□□□□□ -0.52
SMAD3-202ENST00000439724 A8MT66 165 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 C5orf67F2Z3F1 127 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 F8W8V4 182 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 K7ERQ8 282 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 MATN2O00339 956 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 HDAC3O15379 428 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 STX7O15400 261 aaKnown RBP11.76□□□□□ -0.53
SMAD3-202ENST00000439724 DIAPH2O60879 1101 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 SOCS5O75159 536 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 MOSPD3O75425 235 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 WFS1O76024 890 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 IPO13O94829 963 aaKnown RBP11.76□□□□□ -0.53
SMAD3-202ENST00000439724 PENKP01210 267 aaPredicted RBP11.76□□□□□ -0.53
SMAD3-202ENST00000439724 ZNF37AP17032 561 aaPredicted RBP11.76□□□□□ -0.53
SMAD3-202ENST00000439724 PTPN2P17706 415 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 SLC8A1P32418 973 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 CD70P32970 193 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 ABL2P42684 1182 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 ARHGAP15Q53QZ3 475 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 METTL21CQ5VZV1 264 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 TRIM67Q6ZTA4 783 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 TPGS1Q6ZTW0 290 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 PIM3Q86V86 326 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 EFHBQ8N7U6 833 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 TTC16Q8NEE8 873 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 CNDP1Q96KN2 507 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 SMIM14Q96QK8 99 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 MIPEPQ99797 713 aa11.76□□□□□ -0.53
SMAD3-202ENST00000439724 UNKQ9C0B0 810 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms