RNA–Protein interactions for RNA: ENST00000439286.5

GARNL3-206, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-206ENST00000439286 CERCAMQ5T4B2 595 aa13.55□□□□□ -0.24
GARNL3-206ENST00000439286 PHF19Q5T6S3 580 aa13.55□□□□□ -0.24
GARNL3-206ENST00000439286 ARMC12Q5T9G4 340 aa13.55□□□□□ -0.24
GARNL3-206ENST00000439286 TMEM164Q5U3C3 297 aa13.55□□□□□ -0.24
GARNL3-206ENST00000439286 SPECC1LQ69YQ0 1117 aa13.55□□□□□ -0.24
GARNL3-206ENST00000439286 USP45Q70EL2 814 aa13.55□□□□□ -0.24
GARNL3-206ENST00000439286 POLNQ7Z5Q5 900 aa13.55□□□□□ -0.24
GARNL3-206ENST00000439286 B3GNT8Q7Z7M8 397 aa13.55□□□□□ -0.24
GARNL3-206ENST00000439286 SNRNP27Q8WVK2 155 aaKnown RBP13.55□□□□□ -0.24
GARNL3-206ENST00000439286 COQ10AQ96MF6 247 aa13.55□□□□□ -0.24
GARNL3-206ENST00000439286 LGR4Q9BXB1 951 aa13.55□□□□□ -0.24
GARNL3-206ENST00000439286 ISCUQ9H1K1 167 aa13.55□□□□□ -0.24
GARNL3-206ENST00000439286 NOD2Q9HC29 1040 aa13.55□□□□□ -0.24
GARNL3-206ENST00000439286 IP6K2Q9UHH9 426 aa13.55□□□□□ -0.24
GARNL3-206ENST00000439286 RNF215Q9Y6U7 377 aa13.55□□□□□ -0.24
GARNL3-206ENST00000439286 A0A1B0GTH6 734 aa13.54□□□□□ -0.24
GARNL3-206ENST00000439286 TTC24A2A3L6 582 aaPredicted RBP13.54□□□□□ -0.24
GARNL3-206ENST00000439286 PMS2P1A4D2B8 440 aa13.54□□□□□ -0.24
GARNL3-206ENST00000439286 PSMD11O00231 422 aa13.54□□□□□ -0.24
GARNL3-206ENST00000439286 CASC3O15234 703 aaKnown RBP13.54□□□□□ -0.24
GARNL3-206ENST00000439286 NVLO15381 856 aaKnown RBP13.54□□□□□ -0.24
GARNL3-206ENST00000439286 HTRA2O43464 458 aaPredicted RBP13.54□□□□□ -0.24
GARNL3-206ENST00000439286 RARAP10276 462 aa13.54□□□□□ -0.24
GARNL3-206ENST00000439286 CCNB1P14635 433 aa13.54□□□□□ -0.24
GARNL3-206ENST00000439286 ALDH4A1P30038 563 aa13.54□□□□□ -0.24
GARNL3-206ENST00000439286 GNPDA1P46926 289 aa13.54□□□□□ -0.24
GARNL3-206ENST00000439286 HLTFQ14527 1009 aaKnown RBP eCLIP13.54□□□□□ -0.24
GARNL3-206ENST00000439286 NFKBIBQ15653 356 aa13.54□□□□□ -0.24
GARNL3-206ENST00000439286 CNGA3Q16281 694 aa13.54□□□□□ -0.24
GARNL3-206ENST00000439286 HADHQ16836 314 aaKnown RBP13.54□□□□□ -0.24
GARNL3-206ENST00000439286 RAET1GQ6H3X3 334 aa13.54□□□□□ -0.24
GARNL3-206ENST00000439286 NYAP1Q6ZVC0 841 aa13.54□□□□□ -0.24
GARNL3-206ENST00000439286 USP53Q70EK8 1073 aa13.54□□□□□ -0.24
GARNL3-206ENST00000439286 PIM3Q86V86 326 aa13.54□□□□□ -0.24
GARNL3-206ENST00000439286 HEATR4Q86WZ0 1026 aa13.54□□□□□ -0.24
GARNL3-206ENST00000439286 LRRC49Q8IUZ0 686 aa13.54□□□□□ -0.24
GARNL3-206ENST00000439286 ZDHHC1Q8WTX9 485 aa13.54□□□□□ -0.24
GARNL3-206ENST00000439286 SCRN2Q96FV2 425 aa13.54□□□□□ -0.24
GARNL3-206ENST00000439286 NAP1L5Q96NT1 182 aaPredicted RBP13.54□□□□□ -0.24
GARNL3-206ENST00000439286 CSPG4P5Q96PW8 444 aa13.54□□□□□ -0.24
GARNL3-206ENST00000439286 TRNAU1APQ9NX07 287 aaKnown RBP13.54□□□□□ -0.24
GARNL3-206ENST00000439286 ATXN7L1Q9ULK2 861 aaPredicted RBP13.54□□□□□ -0.24
GARNL3-206ENST00000439286 NBEAQ8NFP9 2946 aa13.54□□□□□ -0.24
GARNL3-206ENST00000439286 MYO1FO00160 1098 aa13.53□□□□□ -0.24
GARNL3-206ENST00000439286 AGRPO00253 132 aa13.53□□□□□ -0.24
GARNL3-206ENST00000439286 NOBOXO60393 691 aa13.53□□□□□ -0.24
GARNL3-206ENST00000439286 MAFKO60675 156 aa13.53□□□□□ -0.24
GARNL3-206ENST00000439286 HGFP14210 728 aa13.53□□□□□ -0.24
GARNL3-206ENST00000439286 IL1R2P27930 398 aa13.53□□□□□ -0.24
GARNL3-206ENST00000439286 ETV3P41162 512 aa13.53□□□□□ -0.24
GARNL3-206ENST00000439286 GPR1P46091 355 aa13.53□□□□□ -0.24
GARNL3-206ENST00000439286 PPM1FP49593 454 aaPredicted RBP13.53□□□□□ -0.24
GARNL3-206ENST00000439286 MAPK10P53779 464 aa13.53□□□□□ -0.24
GARNL3-206ENST00000439286 EPHB1P54762 984 aa13.53□□□□□ -0.24
GARNL3-206ENST00000439286 MAXP61244 160 aa13.53□□□□□ -0.24
GARNL3-206ENST00000439286 ZFP36L1Q07352 338 aaKnown RBP13.53□□□□□ -0.24
GARNL3-206ENST00000439286 AMZ1Q400G9 498 aa13.53□□□□□ -0.24
GARNL3-206ENST00000439286 FIGNQ5HY92 759 aa13.53□□□□□ -0.24
GARNL3-206ENST00000439286 CYP4V2Q6ZWL3 525 aaPredicted RBP13.53□□□□□ -0.24
GARNL3-206ENST00000439286 SPRED1Q7Z699 444 aa13.53□□□□□ -0.24
GARNL3-206ENST00000439286 TP53INP2Q8IXH6 220 aa13.53□□□□□ -0.24
GARNL3-206ENST00000439286 ZSCAN1Q8NBB4 408 aa13.53□□□□□ -0.24
GARNL3-206ENST00000439286 CCL4L1Q8NHW4 92 aa13.53□□□□□ -0.24
GARNL3-206ENST00000439286 GPBAR1Q8TDU6 330 aa13.53□□□□□ -0.24
GARNL3-206ENST00000439286 TEKT4Q8WW24 435 aa13.53□□□□□ -0.24
GARNL3-206ENST00000439286 SPOCK2Q92563 424 aa13.53□□□□□ -0.24
GARNL3-206ENST00000439286 DTD2Q96FN9 168 aa13.53□□□□□ -0.24
GARNL3-206ENST00000439286 MGME1Q9BQP7 344 aa13.53□□□□□ -0.24
GARNL3-206ENST00000439286 ARHGAP9Q9BRR9 750 aa13.53□□□□□ -0.24
GARNL3-206ENST00000439286 TEX101Q9BY14 249 aa13.53□□□□□ -0.24
GARNL3-206ENST00000439286 TMEM63CQ9P1W3 806 aa13.53□□□□□ -0.24
GARNL3-206ENST00000439286 SSUH2Q9Y2M2 353 aa13.53□□□□□ -0.24
GARNL3-206ENST00000439286 CELSR3Q9NYQ7 3312 aa13.53□□□□□ -0.24
GARNL3-206ENST00000439286 KNTC1P50748 2209 aa13.52□□□□□ -0.24
GARNL3-206ENST00000439286 PGLSO95336 258 aa13.52□□□□□ -0.25
GARNL3-206ENST00000439286 CPNE6O95741 557 aa13.52□□□□□ -0.25
GARNL3-206ENST00000439286 PYGLP06737 847 aa13.52□□□□□ -0.25
GARNL3-206ENST00000439286 LIPCP11150 499 aa13.52□□□□□ -0.25
GARNL3-206ENST00000439286 PLA2G2AP14555 144 aa13.52□□□□□ -0.25
GARNL3-206ENST00000439286 GM2AP17900 193 aa13.52□□□□□ -0.25
GARNL3-206ENST00000439286 CR2P20023 1033 aa13.52□□□□□ -0.25
GARNL3-206ENST00000439286 CA4P22748 312 aa13.52□□□□□ -0.25
GARNL3-206ENST00000439286 CES1P23141 567 aa13.52□□□□□ -0.25
GARNL3-206ENST00000439286 CDK3Q00526 305 aa13.52□□□□□ -0.25
GARNL3-206ENST00000439286 LY6DQ14210 128 aa13.52□□□□□ -0.25
GARNL3-206ENST00000439286 NR1I3Q14994 352 aa13.52□□□□□ -0.25
GARNL3-206ENST00000439286 CLPPQ16740 277 aaPredicted RBP13.52□□□□□ -0.25
GARNL3-206ENST00000439286 MANEAQ5SRI9 462 aa13.52□□□□□ -0.25
GARNL3-206ENST00000439286 KIAA1614Q5VZ46 1190 aa13.52□□□□□ -0.25
GARNL3-206ENST00000439286 KCTD16Q68DU8 428 aa13.52□□□□□ -0.25
GARNL3-206ENST00000439286 TIGD7Q6NT04 549 aaPredicted RBP13.52□□□□□ -0.25
GARNL3-206ENST00000439286 CAVIN1Q6NZI2 390 aaKnown RBP13.52□□□□□ -0.25
GARNL3-206ENST00000439286 PCSK4Q6UW60 755 aa13.52□□□□□ -0.25
GARNL3-206ENST00000439286 Q6ZVL8 140 aa13.52□□□□□ -0.25
GARNL3-206ENST00000439286 HSD11B1LQ7Z5J1 315 aa13.52□□□□□ -0.25
GARNL3-206ENST00000439286 TTC9Q92623 222 aa13.52□□□□□ -0.25
GARNL3-206ENST00000439286 MED8Q96G25 268 aa13.52□□□□□ -0.25
GARNL3-206ENST00000439286 ZMYND15Q9H091 742 aa13.52□□□□□ -0.25
GARNL3-206ENST00000439286 PCDH18Q9HCL0 1135 aa13.52□□□□□ -0.25
GARNL3-206ENST00000439286 NT5MQ9NPB1 228 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms