RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 WDCPQ9H6R7 721 aa11.2□□□□□ -0.62
CSTF3-203ENST00000438862 ASNSD1Q9NWL6 643 aa11.2□□□□□ -0.62
CSTF3-203ENST00000438862 PDP2Q9P2J9 529 aa11.2□□□□□ -0.62
CSTF3-203ENST00000438862 SLC5A6Q9Y289 635 aa11.2□□□□□ -0.62
CSTF3-203ENST00000438862 OR1A2Q9Y585 309 aa11.2□□□□□ -0.62
CSTF3-203ENST00000438862 ZNF106Q9H2Y7 1883 aaKnown RBP11.19□□□□□ -0.62
CSTF3-203ENST00000438862 IGLV3-10A0A075B6K4 115 aa11.19□□□□□ -0.62
CSTF3-203ENST00000438862 BECN2A8MW95 431 aa11.19□□□□□ -0.62
CSTF3-203ENST00000438862 CACNB4O00305 520 aaPredicted RBP11.19□□□□□ -0.62
CSTF3-203ENST00000438862 HSF2BPO75031 334 aa11.19□□□□□ -0.62
CSTF3-203ENST00000438862 STK17BO94768 372 aa11.19□□□□□ -0.62
CSTF3-203ENST00000438862 SORBS2O94875 1100 aaKnown RBP11.19□□□□□ -0.62
CSTF3-203ENST00000438862 PDGFAP04085 211 aa11.19□□□□□ -0.62
CSTF3-203ENST00000438862 FGF1P05230 155 aa11.19□□□□□ -0.62
CSTF3-203ENST00000438862 HOXC4P09017 264 aaPredicted RBP11.19□□□□□ -0.62
CSTF3-203ENST00000438862 STAT1P42224 750 aa11.19□□□□□ -0.62
CSTF3-203ENST00000438862 STAT5AP42229 794 aa11.19□□□□□ -0.62
CSTF3-203ENST00000438862 LEPRP48357 1165 aaKnown RBP11.19□□□□□ -0.62
CSTF3-203ENST00000438862 MARSP56192 900 aaKnown RBP11.19□□□□□ -0.62
CSTF3-203ENST00000438862 MAZP56270 477 aaKnown RBP11.19□□□□□ -0.62
CSTF3-203ENST00000438862 KIAA1024LP59773 190 aa11.19□□□□□ -0.62
CSTF3-203ENST00000438862 TPM4P67936 248 aa11.19□□□□□ -0.62
CSTF3-203ENST00000438862 RAD51Q06609 339 aa11.19□□□□□ -0.62
CSTF3-203ENST00000438862 MRPL49Q13405 166 aaKnown RBP11.19□□□□□ -0.62
CSTF3-203ENST00000438862 PEX6Q13608 980 aa11.19□□□□□ -0.62
CSTF3-203ENST00000438862 TAF5Q15542 800 aa11.19□□□□□ -0.62
CSTF3-203ENST00000438862 BRMS1LQ5PSV4 323 aa11.19□□□□□ -0.62
CSTF3-203ENST00000438862 C11orf57Q6ZUT1 292 aaPredicted RBP11.19□□□□□ -0.62
CSTF3-203ENST00000438862 TFAP2DQ7Z6R9 452 aa11.19□□□□□ -0.62
CSTF3-203ENST00000438862 ZNF683Q8IZ20 524 aa11.19□□□□□ -0.62
CSTF3-203ENST00000438862 OR6K2Q8NGY2 324 aa11.19□□□□□ -0.62
CSTF3-203ENST00000438862 ZDHHC1Q8WTX9 485 aa11.19□□□□□ -0.62
CSTF3-203ENST00000438862 OR1E3Q8WZA6 343 aa11.19□□□□□ -0.62
CSTF3-203ENST00000438862 TKTL2Q9H0I9 626 aa11.19□□□□□ -0.62
CSTF3-203ENST00000438862 METTL14Q9HCE5 456 aaKnown RBP11.19□□□□□ -0.62
CSTF3-203ENST00000438862 SPATS2LQ9NUQ6 558 aaKnown RBP11.19□□□□□ -0.62
CSTF3-203ENST00000438862 TMEM51Q9NW97 253 aa11.19□□□□□ -0.62
CSTF3-203ENST00000438862 MPP6Q9NZW5 540 aa11.19□□□□□ -0.62
CSTF3-203ENST00000438862 CTNND2Q9UQB3 1225 aa11.19□□□□□ -0.62
CSTF3-203ENST00000438862 RPS6KL1Q9Y6S9 549 aa11.19□□□□□ -0.62
CSTF3-203ENST00000438862 PRRC2CQ9Y520 2896 aaKnown RBP11.19□□□□□ -0.62
CSTF3-203ENST00000438862 APCP25054 2843 aa11.19□□□□□ -0.62
CSTF3-203ENST00000438862 DOCK4Q8N1I0 1966 aa11.19□□□□□ -0.62
CSTF3-203ENST00000438862 IGHV1OR21-1A0A087WYE8 117 aa11.18□□□□□ -0.62
CSTF3-203ENST00000438862 TMEM202A6NGA9 273 aa11.18□□□□□ -0.62
CSTF3-203ENST00000438862 SLC16A3O15427 465 aaKnown RBP11.18□□□□□ -0.62
CSTF3-203ENST00000438862 MED7O43513 233 aa11.18□□□□□ -0.62
CSTF3-203ENST00000438862 DLGAP3O95886 979 aa11.18□□□□□ -0.62
CSTF3-203ENST00000438862 CD160O95971 181 aa11.18□□□□□ -0.62
CSTF3-203ENST00000438862 CCNB1P14635 433 aa11.18□□□□□ -0.62
CSTF3-203ENST00000438862 ETFBP38117 255 aa11.18□□□□□ -0.62
CSTF3-203ENST00000438862 PMS1P54277 932 aaKnown RBP11.18□□□□□ -0.62
CSTF3-203ENST00000438862 GPLD1P80108 840 aa11.18□□□□□ -0.62
CSTF3-203ENST00000438862 GNA12Q03113 381 aa11.18□□□□□ -0.62
CSTF3-203ENST00000438862 RAPGEF1Q13905 1077 aa11.18□□□□□ -0.62
CSTF3-203ENST00000438862 ERV3-1Q14264 604 aa11.18□□□□□ -0.62
CSTF3-203ENST00000438862 TPD52L1Q16890 204 aaPredicted RBP11.18□□□□□ -0.62
CSTF3-203ENST00000438862 LINC01559Q495D7 138 aa11.18□□□□□ -0.62
CSTF3-203ENST00000438862 NADK2Q4G0N4 442 aa11.18□□□□□ -0.62
CSTF3-203ENST00000438862 DCAF17Q5H9S7 520 aaPredicted RBP11.18□□□□□ -0.62
CSTF3-203ENST00000438862 LRRC73Q5JTD7 316 aa11.18□□□□□ -0.62
CSTF3-203ENST00000438862 NKAIN2Q5VXU1 208 aa11.18□□□□□ -0.62
CSTF3-203ENST00000438862 KCTD16Q68DU8 428 aa11.18□□□□□ -0.62
CSTF3-203ENST00000438862 DENND1BQ6P3S1 775 aa11.18□□□□□ -0.62
CSTF3-203ENST00000438862 HCAR2Q8TDS4 363 aa11.18□□□□□ -0.62
CSTF3-203ENST00000438862 VOPP1Q96AW1 172 aa11.18□□□□□ -0.62
CSTF3-203ENST00000438862 NT5C1BQ96P26 610 aa11.18□□□□□ -0.62
CSTF3-203ENST00000438862 CTRCQ99895 268 aa11.18□□□□□ -0.62
CSTF3-203ENST00000438862 GSDMCQ9BYG8 508 aa11.18□□□□□ -0.62
CSTF3-203ENST00000438862 RUBCNLQ9H714 662 aa11.18□□□□□ -0.62
CSTF3-203ENST00000438862 CBX8Q9HC52 389 aa11.18□□□□□ -0.62
CSTF3-203ENST00000438862 FGF22Q9HCT0 170 aa11.18□□□□□ -0.62
CSTF3-203ENST00000438862 MRPL40Q9NQ50 206 aaKnown RBP11.18□□□□□ -0.62
CSTF3-203ENST00000438862 ARHGEF38Q9NXL2 777 aa11.18□□□□□ -0.62
CSTF3-203ENST00000438862 RRN3Q9NYV6 651 aa11.18□□□□□ -0.62
CSTF3-203ENST00000438862 KCND3Q9UK17 655 aa11.18□□□□□ -0.62
CSTF3-203ENST00000438862 ENTPD4Q9Y227 616 aa11.18□□□□□ -0.62
CSTF3-203ENST00000438862 COQ6Q9Y2Z9 468 aa11.18□□□□□ -0.62
CSTF3-203ENST00000438862 MRPS18BQ9Y676 258 aaKnown RBP11.18□□□□□ -0.62
CSTF3-203ENST00000438862 OAS3Q9Y6K5 1087 aaKnown RBP11.18□□□□□ -0.62
CSTF3-203ENST00000438862 LRRC10BA6NIK2 292 aa11.17□□□□□ -0.62
CSTF3-203ENST00000438862 GOLGA6L19H0YKK7 550 aa11.17□□□□□ -0.62
CSTF3-203ENST00000438862 PDE2AO00408 941 aaPredicted RBP11.17□□□□□ -0.62
CSTF3-203ENST00000438862 ECEL1O95672 775 aa11.17□□□□□ -0.62
CSTF3-203ENST00000438862 CALCAP01258 141 aa11.17□□□□□ -0.62
CSTF3-203ENST00000438862 ITIH2P19823 946 aa11.17□□□□□ -0.62
CSTF3-203ENST00000438862 XPAP23025 273 aaPredicted RBP11.17□□□□□ -0.62
CSTF3-203ENST00000438862 F8A1P23610 371 aa11.17□□□□□ -0.62
CSTF3-203ENST00000438862 MPSTP25325 297 aa11.17□□□□□ -0.62
CSTF3-203ENST00000438862 EEF1GP26641 437 aaKnown RBP11.17□□□□□ -0.62
CSTF3-203ENST00000438862 DLSTP36957 453 aa11.17□□□□□ -0.62
CSTF3-203ENST00000438862 CXCR3P49682 368 aa11.17□□□□□ -0.62
CSTF3-203ENST00000438862 PGDP52209 483 aa11.17□□□□□ -0.62
CSTF3-203ENST00000438862 SEMA5AQ13591 1074 aa11.17□□□□□ -0.62
CSTF3-203ENST00000438862 TP53INP2Q8IXH6 220 aa11.17□□□□□ -0.62
CSTF3-203ENST00000438862 PPM1KQ8N3J5 372 aa11.17□□□□□ -0.62
CSTF3-203ENST00000438862 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.17□□□□□ -0.62
CSTF3-203ENST00000438862 CCL4L1Q8NHW4 92 aa11.17□□□□□ -0.62
CSTF3-203ENST00000438862 PDCD6IPQ8WUM4 868 aaKnown RBP11.17□□□□□ -0.62
CSTF3-203ENST00000438862 ARHGEF2Q92974 986 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms