RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 B4DGG1 531 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 INSIG1O15503 277 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 GOLGA6DP0CG33 693 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 KRT10P13645 584 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 TNFAIP3P21580 790 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 ARL4AP40617 200 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 PPM1FP49593 454 aaPredicted RBP7.8□□□□□ -1.16
VPS50-204ENST00000438395 PAPOLAP51003 745 aaKnown RBP7.8□□□□□ -1.16
VPS50-204ENST00000438395 RENBPP51606 427 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 ZNF135P52742 658 aaPredicted RBP7.8□□□□□ -1.16
VPS50-204ENST00000438395 INHBCP55103 352 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 KIAA1024LP59773 190 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 AP1S1P61966 158 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 RPL7AP62424 266 aaKnown RBP7.8□□□□□ -1.16
VPS50-204ENST00000438395 ZNF235Q14590 738 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 RFTN1Q14699 578 aaPredicted RBP7.8□□□□□ -1.16
VPS50-204ENST00000438395 ACOX1Q15067 660 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 MAP9Q49MG5 647 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 C4orf17Q53FE4 359 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 ARTNQ5T4W7 220 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 TMCO4Q5TGY1 634 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 ACAD10Q6JQN1 1059 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 RFX8Q6ZV50 586 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 RAB11FIP2Q7L804 512 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 SRLQ86TD4 932 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 CAMK1DQ8IU85 385 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 CCNJLQ8IV13 435 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 MCOLN2Q8IZK6 566 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 BBS5Q8N3I7 341 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 ZNF843Q8N446 348 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 Q8N9G6 341 aaPredicted RBP7.8□□□□□ -1.16
VPS50-204ENST00000438395 PLPP7Q8NBV4 271 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 FAM46DQ8NEK8 389 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 OR56A4Q8NGH8 313 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 KIAA1524Q8TCG1 905 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 NSMCE1Q8WV22 266 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 TRIM11Q96F44 468 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 PDXPQ96GD0 296 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 LIN37Q96GY3 246 aaPredicted RBP7.8□□□□□ -1.16
VPS50-204ENST00000438395 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.8□□□□□ -1.16
VPS50-204ENST00000438395 APOOQ9BUR5 198 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 MAGEB5Q9BZ81 275 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 FOXP3Q9BZS1 431 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 CLPBQ9H078 707 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 KLC2Q9H0B6 622 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 NOL6Q9H6R4 1146 aaKnown RBP7.8□□□□□ -1.16
VPS50-204ENST00000438395 SUDS3Q9H7L9 328 aaPredicted RBP7.8□□□□□ -1.16
VPS50-204ENST00000438395 ZWILCHQ9H900 591 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 GPATCH2LQ9NWQ4 482 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 GOLGA6AQ9NYA3 693 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 SEPT10Q9P0V9 454 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 SEPT3Q9UH03 358 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 LIMA1Q9UHB6 759 aaKnown RBP7.8□□□□□ -1.16
VPS50-204ENST00000438395 SCINQ9Y6U3 715 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 MAST4O15021 2626 aa7.8□□□□□ -1.16
VPS50-204ENST00000438395 TLN1Q9Y490 2541 aaKnown RBP7.79□□□□□ -1.16
VPS50-204ENST00000438395 COL6A6A6NMZ7 2263 aa7.79□□□□□ -1.16
VPS50-204ENST00000438395 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.79□□□□□ -1.16
VPS50-204ENST00000438395 A0A1W2PQ67 120 aa7.79□□□□□ -1.16
VPS50-204ENST00000438395 CFAP69A5D8W1 941 aa7.79□□□□□ -1.16
VPS50-204ENST00000438395 H3BRJ5 948 aa7.79□□□□□ -1.16
VPS50-204ENST00000438395 J3KR12 359 aa7.79□□□□□ -1.16
VPS50-204ENST00000438395 J3QKU1 62 aa7.79□□□□□ -1.16
VPS50-204ENST00000438395 C1QL1O75973 258 aa7.79□□□□□ -1.16
VPS50-204ENST00000438395 RECQL5O94762 991 aaPredicted RBP7.79□□□□□ -1.16
VPS50-204ENST00000438395 PRKCGP05129 697 aa7.79□□□□□ -1.16
VPS50-204ENST00000438395 CELA2BP08218 269 aaPredicted RBP7.79□□□□□ -1.16
VPS50-204ENST00000438395 PLA2G2AP14555 144 aa7.79□□□□□ -1.16
VPS50-204ENST00000438395 ITIH2P19823 946 aa7.79□□□□□ -1.16
VPS50-204ENST00000438395 HSPA9P38646 679 aaKnown RBP7.79□□□□□ -1.16
VPS50-204ENST00000438395 CSNK1DP48730 415 aa7.79□□□□□ -1.16
VPS50-204ENST00000438395 SRSF11Q05519 484 aaKnown RBP7.79□□□□□ -1.16
VPS50-204ENST00000438395 ILF3Q12906 894 aaKnown RBP eCLIP7.79□□□□□ -1.16
VPS50-204ENST00000438395 PEX6Q13608 980 aa7.79□□□□□ -1.16
VPS50-204ENST00000438395 CYTH1Q15438 398 aa7.79□□□□□ -1.16
VPS50-204ENST00000438395 ASIC2Q16515 512 aa7.79□□□□□ -1.16
VPS50-204ENST00000438395 FILIP1LQ4L180 1135 aa7.79□□□□□ -1.16
VPS50-204ENST00000438395 PHF19Q5T6S3 580 aa7.79□□□□□ -1.16
VPS50-204ENST00000438395 TMEM214Q6NUQ4 689 aaKnown RBP7.79□□□□□ -1.16
VPS50-204ENST00000438395 CLEC14AQ86T13 490 aa7.79□□□□□ -1.16
VPS50-204ENST00000438395 TSEN2Q8NCE0 465 aaKnown RBP7.79□□□□□ -1.16
VPS50-204ENST00000438395 PDCD6IPQ8WUM4 868 aaKnown RBP7.79□□□□□ -1.16
VPS50-204ENST00000438395 ERGIC2Q96RQ1 377 aa7.79□□□□□ -1.16
VPS50-204ENST00000438395 CCNL2Q96S94 520 aaPredicted RBP7.79□□□□□ -1.16
VPS50-204ENST00000438395 RBM15Q96T37 977 aaKnown RBP eCLIP7.79□□□□□ -1.16
VPS50-204ENST00000438395 CMKLR1Q99788 373 aa7.79□□□□□ -1.16
VPS50-204ENST00000438395 LRRN3Q9H3W5 708 aa7.79□□□□□ -1.16
VPS50-204ENST00000438395 DPEP2Q9H4A9 486 aa7.79□□□□□ -1.16
VPS50-204ENST00000438395 LRRC19Q9H756 370 aa7.79□□□□□ -1.16
VPS50-204ENST00000438395 PDFQ9HBH1 243 aa7.79□□□□□ -1.16
VPS50-204ENST00000438395 CYP4F12Q9HCS2 524 aa7.79□□□□□ -1.16
VPS50-204ENST00000438395 PHPT1Q9NRX4 125 aaPredicted RBP7.79□□□□□ -1.16
VPS50-204ENST00000438395 HAUS2Q9NVX0 235 aa7.79□□□□□ -1.16
VPS50-204ENST00000438395 KCTD5Q9NXV2 234 aa7.79□□□□□ -1.16
VPS50-204ENST00000438395 PISDQ9UG56 409 aa7.79□□□□□ -1.16
VPS50-204ENST00000438395 PCSK1NQ9UHG2 260 aa7.79□□□□□ -1.16
VPS50-204ENST00000438395 ATXN7L1Q9ULK2 861 aaPredicted RBP7.79□□□□□ -1.16
VPS50-204ENST00000438395 MYO6Q9UM54 1294 aa7.79□□□□□ -1.16
VPS50-204ENST00000438395 LOXL2Q9Y4K0 774 aa7.79□□□□□ -1.16
VPS50-204ENST00000438395 PCDHGA7Q9Y5G6 932 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms