RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 ATP6V1B1P15313 513 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 TCF4P15884 667 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 ZFXP17010 805 aaPredicted RBP6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 ERCC2P18074 760 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 SPINK2P20155 84 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 KDELR1P24390 212 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 PMLP29590 882 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 OPRD1P41143 372 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 CSKP41240 450 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 GRIA2P42262 883 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 SLC6A11P48066 632 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 LIG3P49916 1009 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 CCT8P50990 548 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 PSMD7P51665 324 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 YBEYP58557 167 aaPredicted RBP6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 STARD6P59095 220 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 ARPC4P59998 168 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 ST8SIA6P61647 398 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 GNG11P61952 73 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 RPS26P62854 115 aaKnown RBP6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 CBX1P83916 185 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 FAPQ12884 760 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 LMAN2Q12907 356 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 LAPTM5Q13571 262 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 SEPT6Q14141 434 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 TFDP2Q14188 446 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 DMC1Q14565 340 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 POLD3Q15054 466 aaPredicted RBP6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 C5orf22Q49AR2 442 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 FBXO43Q4G163 708 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 ATP13A4Q4VNC1 1196 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 TFDP3Q5H9I0 405 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 DGKKQ5KSL6 1271 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 FAM72AQ5TYM5 149 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 MANEALQ5VSG8 457 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 TXNRD3NBQ6F5E7 133 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 CAPRIN2Q6IMN6 1127 aaKnown RBP6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 FAM72DQ6L9T8 149 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 FAM180BQ6P0A1 224 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 LRFN4Q6PJG9 635 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 KDELC1Q6UW63 502 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 ZNF783Q6ZMS7 281 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 MICALCLQ6ZW33 695 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 CYP4V2Q6ZWL3 525 aaPredicted RBP6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 CEP68Q76N32 757 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 BZW1Q7L1Q6 419 aaKnown RBP6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 HDXQ7Z353 690 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 SPATA21Q7Z572 469 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 FAM72BQ86X60 149 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 VSIG1Q86XK7 387 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 DTX1Q86Y01 620 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 KATNAL2Q8IYT4 538 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 ZNF683Q8IZ20 524 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 SLC35F6Q8N357 371 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 LZTR1Q8N653 840 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 TRIML2Q8N7C3 387 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 LSMEM1Q8N8F7 131 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 LRRC57Q8N9N7 239 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 TERB1Q8NA31 727 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 EXD1Q8NHP7 514 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 NSMCE1Q8WV22 266 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 CHFRQ96EP1 664 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 MYEOVQ96EZ4 313 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 PLPPR2Q96GM1 343 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 CSPG4P5Q96PW8 444 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 ELAC2Q9BQ52 826 aaKnown RBP6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 UQCC2Q9BRT2 126 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 ZNF670Q9BS34 389 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 SPON2Q9BUD6 331 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 FAM126AQ9BYI3 521 aaPredicted RBP6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 MAGEB5Q9BZ81 275 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 TBC1D17Q9HA65 648 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 ATP13A1Q9HD20 1204 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 LTB4R2Q9NPC1 389 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 ABCB8Q9NUT2 735 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 PFDN2Q9UHV9 154 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 SLC25A13Q9UJS0 675 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 GGA2Q9UJY4 613 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 VPS28Q9UK41 221 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 PACSIN2Q9UNF0 486 aaPredicted RBP6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 SLC27A6Q9Y2P4 619 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 BRWD1Q9NSI6 2320 aa6.26□□□□□ -1.41
ECHDC1-208ENST00000436638 RANBP2P49792 3224 aaKnown RBP6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 ILVBLA1L0T0 632 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 TMEM221A6NGB7 291 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 ZNF487B1APH4 448 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 M0R296 226 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 DFFAO00273 331 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 KCNK3O14649 394 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 NDC80O14777 642 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 MCF2LO15068 1137 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 FANCGO15287 622 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 ATG13O75143 517 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 LEFTY1O75610 366 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 TIPRLO75663 272 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 TJP3O95049 919 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 SNX4O95219 450 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 CNOT4O95628 575 aaKnown RBP6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 CISD3P0C7P0 127 aa6.25□□□□□ -1.41
ECHDC1-208ENST00000436638 STMN1P16949 149 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms