RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 HADHAP40939 763 aa23.02■■□□□ 1.28
CPSF4-204ENST00000436336 RPS14P62263 151 aaKnown RBP23.02■■□□□ 1.28
CPSF4-204ENST00000436336 PTPRCAPQ14761 206 aa23.02■■□□□ 1.28
CPSF4-204ENST00000436336 UBXN2BQ14CS0 331 aa23.02■■□□□ 1.28
CPSF4-204ENST00000436336 LRRC66Q68CR7 880 aa23.02■■□□□ 1.28
CPSF4-204ENST00000436336 DPPA4Q7L190 304 aa23.02■■□□□ 1.28
CPSF4-204ENST00000436336 TSPAN33Q86UF1 283 aa23.02■■□□□ 1.28
CPSF4-204ENST00000436336 EID2BQ96D98 161 aa23.02■■□□□ 1.28
CPSF4-204ENST00000436336 SMYD2Q9NRG4 433 aa23.02■■□□□ 1.28
CPSF4-204ENST00000436336 IL1RAPL1Q9NZN1 696 aa23.02■■□□□ 1.28
CPSF4-204ENST00000436336 MUTYHQ9UIF7 546 aa23.02■■□□□ 1.28
CPSF4-204ENST00000436336 A0A0U1RQS6 177 aa23.02■■□□□ 1.28
CPSF4-204ENST00000436336 A8MX80 341 aa23.02■■□□□ 1.28
CPSF4-204ENST00000436336 CHURC1-FNTBB4DL54 471 aa23.02■■□□□ 1.28
CPSF4-204ENST00000436336 SLC7A4O43246 635 aa23.02■■□□□ 1.28
CPSF4-204ENST00000436336 ERVK-10P10266 1014 aa23.02■■□□□ 1.28
CPSF4-204ENST00000436336 C7P10643 843 aa23.02■■□□□ 1.28
CPSF4-204ENST00000436336 LHCGRP22888 699 aa23.02■■□□□ 1.28
CPSF4-204ENST00000436336 ARNTP27540 789 aa23.02■■□□□ 1.28
CPSF4-204ENST00000436336 PRAMEP78395 509 aa23.02■■□□□ 1.28
CPSF4-204ENST00000436336 TMPRSS15P98073 1019 aa23.02■■□□□ 1.28
CPSF4-204ENST00000436336 ELP6Q0PNE2 266 aa23.02■■□□□ 1.28
CPSF4-204ENST00000436336 NAB1Q13506 487 aa23.02■■□□□ 1.28
CPSF4-204ENST00000436336 ARHGEF7Q14155 803 aa23.02■■□□□ 1.28
CPSF4-204ENST00000436336 EFTUD2Q15029 972 aaKnown RBP eCLIP23.02■■□□□ 1.283e-13■■■■□ 21.2
CPSF4-204ENST00000436336 LRRC6Q86X45 466 aa23.02■■□□□ 1.28
CPSF4-204ENST00000436336 EPS8L3Q8TE67 593 aaKnown RBP23.02■■□□□ 1.28
CPSF4-204ENST00000436336 HDAC10Q969S8 669 aa23.02■■□□□ 1.28
CPSF4-204ENST00000436336 RAB7BQ96AH8 199 aa23.02■■□□□ 1.28
CPSF4-204ENST00000436336 CDKN2AIPNLQ96HQ2 116 aa23.02■■□□□ 1.28
CPSF4-204ENST00000436336 TBATAQ96M53 351 aa23.02■■□□□ 1.28
CPSF4-204ENST00000436336 MKRN2Q9H000 416 aaKnown RBP23.02■■□□□ 1.28
CPSF4-204ENST00000436336 ZFATQ9P243 1243 aa23.02■■□□□ 1.28
CPSF4-204ENST00000436336 SLC24A2Q9UI40 661 aa23.02■■□□□ 1.28
CPSF4-204ENST00000436336 POC1B-GALNT4F8VUJ3 575 aa23.01■■□□□ 1.27
CPSF4-204ENST00000436336 RASGRF2O14827 1237 aa23.01■■□□□ 1.27
CPSF4-204ENST00000436336 MID1O15344 667 aa23.01■■□□□ 1.27
CPSF4-204ENST00000436336 MMP12P39900 470 aa23.01■■□□□ 1.27
CPSF4-204ENST00000436336 ARSDP51689 593 aa23.01■■□□□ 1.27
CPSF4-204ENST00000436336 SEMG2Q02383 582 aa23.01■■□□□ 1.27
CPSF4-204ENST00000436336 HSP90AA5PQ58FG0 334 aa23.01■■□□□ 1.27
CPSF4-204ENST00000436336 Q6ZS52 159 aa23.01■■□□□ 1.27
CPSF4-204ENST00000436336 RASSF3Q86WH2 238 aa23.01■■□□□ 1.27
CPSF4-204ENST00000436336 TMPRSS6Q8IU80 811 aa23.01■■□□□ 1.27
CPSF4-204ENST00000436336 CTAGE3PQ8IX95 158 aa23.01■■□□□ 1.27
CPSF4-204ENST00000436336 PBXIP1Q96AQ6 731 aa23.01■■□□□ 1.27
CPSF4-204ENST00000436336 PKNOX2Q96KN3 472 aa23.01■■□□□ 1.27
CPSF4-204ENST00000436336 CD320Q9NPF0 282 aa23.01■■□□□ 1.27
CPSF4-204ENST00000436336 MTF2Q9Y483 593 aaPredicted RBP23.01■■□□□ 1.27
CPSF4-204ENST00000436336 FAM170BA6NMN3 283 aa23■■□□□ 1.27
CPSF4-204ENST00000436336 CXorf49A8MYA2 514 aaPredicted RBP23■■□□□ 1.27
CPSF4-204ENST00000436336 H7C0S8 307 aa23■■□□□ 1.27
CPSF4-204ENST00000436336 DRD3P35462 400 aa23■■□□□ 1.27
CPSF4-204ENST00000436336 PTSQ03393 145 aa23■■□□□ 1.27
CPSF4-204ENST00000436336 CCDC15Q0P6D6 951 aa23■■□□□ 1.27
CPSF4-204ENST00000436336 CNTN1Q12860 1018 aa23■■□□□ 1.27
CPSF4-204ENST00000436336 FZD5Q13467 585 aa23■■□□□ 1.27
CPSF4-204ENST00000436336 CRY1Q16526 586 aa23■■□□□ 1.27
CPSF4-204ENST00000436336 KRT71Q3SY84 523 aa23■■□□□ 1.27
CPSF4-204ENST00000436336 TMEM92Q6UXU6 159 aa23■■□□□ 1.27
CPSF4-204ENST00000436336 MARK2Q7KZI7 788 aaKnown RBP23■■□□□ 1.27
CPSF4-204ENST00000436336 PPM1NQ8N819 430 aa23■■□□□ 1.27
CPSF4-204ENST00000436336 GABPB2Q8TAK5 448 aaPredicted RBP23■■□□□ 1.27
CPSF4-204ENST00000436336 PAFAH2Q99487 392 aa23■■□□□ 1.27
CPSF4-204ENST00000436336 MFSD1Q9H3U5 465 aa23■■□□□ 1.27
CPSF4-204ENST00000436336 BPIFA1Q9NP55 256 aa23■■□□□ 1.27
CPSF4-204ENST00000436336 SCML1Q9UN30 329 aa23■■□□□ 1.27
CPSF4-204ENST00000436336 AREL1O15033 823 aa22.99■■□□□ 1.27
CPSF4-204ENST00000436336 PIAS1O75925 651 aa22.99■■□□□ 1.27
CPSF4-204ENST00000436336 DNTTP04053 509 aa22.99■■□□□ 1.27
CPSF4-204ENST00000436336 GCAP28676 217 aa22.99■■□□□ 1.27
CPSF4-204ENST00000436336 P2RY2P41231 377 aa22.99■■□□□ 1.27
CPSF4-204ENST00000436336 MSH2P43246 934 aa22.99■■□□□ 1.27
CPSF4-204ENST00000436336 ZBTB16Q05516 673 aa22.99■■□□□ 1.27
CPSF4-204ENST00000436336 RALGDSQ12967 914 aa22.99■■□□□ 1.27
CPSF4-204ENST00000436336 THOC5Q13769 683 aaKnown RBP22.99■■□□□ 1.27
CPSF4-204ENST00000436336 TEDDM1Q5T9Z0 273 aa22.99■■□□□ 1.27
CPSF4-204ENST00000436336 CACUL1Q86Y37 369 aa22.99■■□□□ 1.27
CPSF4-204ENST00000436336 TDRPQ86YL5 185 aa22.99■■□□□ 1.27
CPSF4-204ENST00000436336 LMNTD2Q8IXW0 634 aa22.99■■□□□ 1.27
CPSF4-204ENST00000436336 AADATQ8N5Z0 425 aa22.99■■□□□ 1.27
CPSF4-204ENST00000436336 OR6P1Q8NGX9 317 aa22.99■■□□□ 1.27
CPSF4-204ENST00000436336 CALML6Q8TD86 181 aa22.99■■□□□ 1.27
CPSF4-204ENST00000436336 SLC44A1Q8WWI5 657 aa22.99■■□□□ 1.27
CPSF4-204ENST00000436336 DHRS4Q9BTZ2 278 aa22.99■■□□□ 1.27
CPSF4-204ENST00000436336 FOXQ1Q9C009 403 aa22.99■■□□□ 1.27
CPSF4-204ENST00000436336 TBC1D17Q9HA65 648 aa22.99■■□□□ 1.27
CPSF4-204ENST00000436336 IARS2Q9NSE4 1012 aaKnown RBP22.99■■□□□ 1.27
CPSF4-204ENST00000436336 PLXNA2O75051 1894 aa22.99■■□□□ 1.27
CPSF4-204ENST00000436336 TLDC2A0PJX2 215 aa22.99■■□□□ 1.27
CPSF4-204ENST00000436336 PLK4O00444 970 aa22.99■■□□□ 1.27
CPSF4-204ENST00000436336 CCL22O00626 93 aa22.99■■□□□ 1.27
CPSF4-204ENST00000436336 OPA1O60313 960 aa22.99■■□□□ 1.27
CPSF4-204ENST00000436336 ATG13O75143 517 aa22.99■■□□□ 1.27
CPSF4-204ENST00000436336 CDH16O75309 829 aa22.99■■□□□ 1.27
CPSF4-204ENST00000436336 RASA2Q15283 850 aa22.99■■□□□ 1.27
CPSF4-204ENST00000436336 PIP5KL1Q5T9C9 394 aa22.99■■□□□ 1.27
CPSF4-204ENST00000436336 SYT13Q7L8C5 426 aa22.99■■□□□ 1.27
CPSF4-204ENST00000436336 CNTN4Q8IWV2 1026 aa22.99■■□□□ 1.27
CPSF4-204ENST00000436336 CBARPQ8N350 705 aaPredicted RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms