RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 EPHB6O15197 1021 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 DENRO43583 198 aaKnown RBP3.77□□□□□ -1.81
SHPRH-205ENST00000433355 LDLRP01130 860 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 CXCL8P10145 99 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 PSMA1P25786 263 aaKnown RBP3.77□□□□□ -1.81
SHPRH-205ENST00000433355 TEAD1P28347 426 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 SLC7A1P30825 629 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 MAGEA12P43365 314 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 MRPS22P82650 360 aaKnown RBP3.77□□□□□ -1.81
SHPRH-205ENST00000433355 ZNF177Q13360 481 aaPredicted RBP3.77□□□□□ -1.81
SHPRH-205ENST00000433355 KIZQ2M2Z5 673 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 CNPY1Q3B7I2 92 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 GRAMD1BQ3KR37 738 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 CCDC92Q53HC0 331 aaPredicted RBP3.77□□□□□ -1.81
SHPRH-205ENST00000433355 C1orf53Q5VUE5 145 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 NPAS4Q8IUM7 802 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 KIAA0319LQ8IZA0 1049 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 AMER2Q8N7J2 671 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 OR6P1Q8NGX9 317 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 DUS3LQ96G46 650 aaKnown RBP3.77□□□□□ -1.81
SHPRH-205ENST00000433355 GLOD4Q9HC38 313 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 CATSPERZQ9NTU4 200 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 SMOXQ9NWM0 555 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 MKLN1Q9UL63 735 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 UNC13CQ8NB66 2214 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 DOCK6Q96HP0 2047 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 A0A0U1RQF3 1178 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 PRNPP04156 253 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 PEPDP12955 493 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 SELPP16109 830 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 ETV6P41212 452 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 ACOT2P49753 483 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 NDST1P52848 882 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 EPHB1P54762 984 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 YWHAHQ04917 246 aaPredicted RBP3.77□□□□□ -1.81
SHPRH-205ENST00000433355 ARHGAP1Q07960 439 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 RPA4Q13156 261 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 NDUFA5Q16718 116 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 VPS26BQ4G0F5 336 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 SCYL2Q6P3W7 929 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 TRIM40Q6P9F5 258 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 ABRAXAS1Q6UWZ7 409 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 BAIAP2L2Q6UXY1 529 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 ASRGL1Q7L266 308 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 KCNV2Q8TDN2 545 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 CXorf40AQ8TE69 158 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 ARL8AQ96BM9 186 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 BIRC8Q96P09 236 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 TMEM120AQ9BXJ8 343 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 TMEM248Q9NWD8 314 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 KLHL28Q9NXS3 571 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 ZMYND8Q9ULU4 1186 aaPredicted RBP3.77□□□□□ -1.81
SHPRH-205ENST00000433355 FAM50BQ9Y247 325 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 TCAF1Q9Y4C2 921 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 AK5Q9Y6K8 562 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 SDK1Q7Z5N4 2213 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 TRIM38O00635 465 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 KERAO60938 352 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 LRG1P02750 347 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 ELF3P78545 371 aaPredicted RBP3.77□□□□□ -1.81
SHPRH-205ENST00000433355 BST1Q10588 318 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 TBL3Q12788 808 aaKnown RBP3.77□□□□□ -1.81
SHPRH-205ENST00000433355 FAM47EQ6ZV65 393 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 PID1Q7Z2X4 250 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 ADGRD2Q7Z7M1 963 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 CLEC4FQ8N1N0 589 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 PCIF1Q9H4Z3 704 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 KLF15Q9UIH9 416 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 PCDHGA2Q9Y5H1 932 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 FAM95CA0A1B0GW59 222 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 E5RJQ4 531 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 SLC22A1O15245 554 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 ATP2C2O75185 946 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 ZCCHC18P0CG32 403 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 WEE1P30291 646 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 MLLT6P55198 1093 aaPredicted RBP3.77□□□□□ -1.81
SHPRH-205ENST00000433355 ST8SIA6P61647 398 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 USP10Q14694 798 aaKnown RBP3.77□□□□□ -1.81
SHPRH-205ENST00000433355 R3HDM1Q15032 1099 aaKnown RBP3.77□□□□□ -1.81
SHPRH-205ENST00000433355 ATP13A5Q4VNC0 1218 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 ARMCX4Q5H9R4 360 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 FBXO32Q969P5 355 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 TMEM159Q96B96 161 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 FAM49AQ9H0Q0 323 aaPredicted RBP3.77□□□□□ -1.81
SHPRH-205ENST00000433355 TASP1Q9H6P5 420 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 SLC9A8Q9Y2E8 581 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 LSM1O15116 133 aaKnown RBP3.77□□□□□ -1.81
SHPRH-205ENST00000433355 RGS14O43566 566 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 ATP9BO43861 1147 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 SLCO1A2P46721 670 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 SP4Q02446 784 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 HSD17B12Q53GQ0 312 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 ZNF549Q6P9A3 640 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 HIPK1Q86Z02 1210 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 CCDC185Q8N715 623 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 PIK3C3Q8NEB9 887 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 FAM111AQ96PZ2 611 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 PCMTD2Q9NV79 361 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 FBXO5Q9UKT4 447 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 ADAMTSL1Q8N6G6 1762 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms