RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 HADHAP40939 763 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 RBM20Q5T481 1227 aaKnown RBP11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 TMEM236Q5W0B7 351 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 ARHGAP17Q68EM7 881 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 XAF1Q6GPH4 301 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 SPRED1Q7Z699 444 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 ANKRD13BQ86YJ7 626 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 PDPRQ8NCN5 879 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 MIR1-1HGQ9H1L0 117 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 SCHIP1Q9P0W5 487 aaPredicted RBP11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 ERVK-11Q9UQG0 969 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 GINS2Q9Y248 185 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 QSER1Q2KHR3 1735 aa11.57□□□□□ -0.56
HMGCS1-202ENST00000433297 MAGEB16A2A368 324 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 FAM47E-STBD1D6RA91 191 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 ABCB7O75027 752 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 INMTO95050 263 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 SLC6A2P23975 617 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 AXLP30530 894 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 ATICP31939 592 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 CD68P34810 354 aaPredicted RBP11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 NPY2RP49146 381 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 DGCR6Q14129 220 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 FBXO48Q5FWF7 155 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 EFCAB12Q6NXP0 572 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 SAPCD2Q86UD0 394 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 COLGALT2Q8IYK4 626 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 SPARTQ8N0X7 666 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 OR7A2PQ8NGA2 310 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 ROPN1LQ96C74 230 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 LRRC58Q96CX6 371 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 C19orf60Q96EN9 201 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 FAR2Q96K12 515 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 HOPXQ9BPY8 73 aaPredicted RBP11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 NACA2Q9H009 215 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 C2orf40Q9H1Z8 148 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 ALG2Q9H553 416 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 ATP13A3Q9H7F0 1226 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 KIAA1257Q9ULG3 409 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 BTRCQ9Y297 605 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 AHDC1Q5TGY3 1603 aaPredicted RBP11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 SCN9AQ15858 1988 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 A0A087WZ62 844 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 TRIM64A6NGJ6 449 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 UBFD1O14562 309 aaKnown RBP11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 NOBOXO60393 691 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 CPNE6O95741 557 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 RABGGTBP53611 331 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 HMGCS2P54868 508 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 LIPEQ05469 1076 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 CDH17Q12864 832 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 GRB7Q14451 532 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 TMEM132BQ14DG7 1078 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 PYCR3Q53H96 274 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 TTC16Q8NEE8 873 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 RHOBTB2Q9BYZ6 727 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 WDR12Q9GZL7 423 aaKnown RBP11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 ALG9Q9H6U8 611 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 GPN2Q9H9Y4 310 aaPredicted RBP11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 PNMA8BQ9ULN7 279 aaPredicted RBP11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 FCGR1AP12314 374 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 CYP2B6P20813 491 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 SLC1A2P43004 574 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 GSK3BP49841 420 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 IST1P53990 364 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 UGP2Q16851 508 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 CCDC81Q6ZN84 652 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 CATSPER4Q7RTX7 472 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 KRT27Q7Z3Y8 459 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 RALGPS2Q86X27 583 aaPredicted RBP11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 HGH1Q9BTY7 390 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 BDH2Q9BUT1 245 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 ACAD9Q9H845 621 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 SNX10Q9Y5X0 201 aa11.56□□□□□ -0.56
HMGCS1-202ENST00000433297 DEAF1O75398 565 aaPredicted RBP11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 DLGAP3O95886 979 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 LINC00032P0C843 101 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 AGXTP21549 392 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 GPX3P22352 226 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 TPI1P60174 286 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 VBP1P61758 197 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 NEPROQ6NW34 567 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 TAF2Q6P1X5 1199 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 C8orf59Q8N0T1 100 aaPredicted RBP11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 MIER2Q8N344 545 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 PNPT1Q8TCS8 783 aaKnown RBP11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 SEPT1Q8WYJ6 367 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 SLC30A3Q99726 388 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 CXCL16Q9H2A7 254 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 SMURF2Q9HAU4 748 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 C16orf96A6NNT2 1141 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 SYCE1LA8MT33 242 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 AXIN1O15169 862 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 ALOX5P09917 674 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 ADARB1P78563 741 aaKnown RBP11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 ECT2LQ008S8 904 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 INCA1Q0VD86 236 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 BNIP2Q12982 314 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 ZNF789Q5FWF6 425 aa11.55□□□□□ -0.56
HMGCS1-202ENST00000433297 BTBD8Q5XKL5 378 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms