RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 EFNA5P52803 228 aa3.35□□□□□ -1.87
CLK1-204ENST00000432425 BRWD1-AS2P59051 145 aa3.35□□□□□ -1.87
CLK1-204ENST00000432425 PHEXP78562 749 aa3.35□□□□□ -1.87
CLK1-204ENST00000432425 KRTAP27-1Q3LI81 207 aa3.35□□□□□ -1.87
CLK1-204ENST00000432425 IRAK1BP1Q5VVH5 260 aa3.35□□□□□ -1.87
CLK1-204ENST00000432425 TXNDC8Q6A555 127 aa3.35□□□□□ -1.87
CLK1-204ENST00000432425 RGMBQ6NW40 437 aa3.35□□□□□ -1.87
CLK1-204ENST00000432425 ANKRD54Q6NXT1 300 aa3.35□□□□□ -1.87
CLK1-204ENST00000432425 KCTD18Q6PI47 426 aaPredicted RBP3.35□□□□□ -1.87
CLK1-204ENST00000432425 SLC36A4Q6YBV0 504 aa3.35□□□□□ -1.87
CLK1-204ENST00000432425 MEX3BQ6ZN04 569 aaKnown RBP3.35□□□□□ -1.87
CLK1-204ENST00000432425 SMIM29Q86T20 159 aa3.35□□□□□ -1.87
CLK1-204ENST00000432425 SLC35F3Q8IY50 421 aa3.35□□□□□ -1.87
CLK1-204ENST00000432425 SPATA22Q8NHS9 363 aa3.35□□□□□ -1.87
CLK1-204ENST00000432425 LNX1Q8TBB1 728 aaPredicted RBP3.35□□□□□ -1.87
CLK1-204ENST00000432425 SPRY4Q9C004 299 aa3.35□□□□□ -1.87
CLK1-204ENST00000432425 NDST4Q9H3R1 872 aa3.35□□□□□ -1.87
CLK1-204ENST00000432425 ESRP2Q9H6T0 727 aaKnown RBP3.35□□□□□ -1.87
CLK1-204ENST00000432425 VEZTQ9HBM0 779 aa3.35□□□□□ -1.87
CLK1-204ENST00000432425 SDF2L1Q9HCN8 221 aa3.35□□□□□ -1.87
CLK1-204ENST00000432425 GPR108Q9NPR9 543 aa3.35□□□□□ -1.87
CLK1-204ENST00000432425 MCM9Q9NXL9 1143 aa3.35□□□□□ -1.87
CLK1-204ENST00000432425 SLC25A10Q9UBX3 287 aaPredicted RBP3.35□□□□□ -1.87
CLK1-204ENST00000432425 TINAGQ9UJW2 476 aa3.35□□□□□ -1.87
CLK1-204ENST00000432425 PSAT1Q9Y617 370 aa3.35□□□□□ -1.87
CLK1-204ENST00000432425 CGNL1Q0VF96 1302 aa3.35□□□□□ -1.87
CLK1-204ENST00000432425 ZNF587BE7ETH6 402 aa3.34□□□□□ -1.87
CLK1-204ENST00000432425 ATP1A1P05023 1023 aaKnown RBP3.34□□□□□ -1.87
CLK1-204ENST00000432425 POLBP06746 335 aa3.34□□□□□ -1.87
CLK1-204ENST00000432425 CYC1P08574 325 aa3.34□□□□□ -1.87
CLK1-204ENST00000432425 CETPP11597 493 aa3.34□□□□□ -1.87
CLK1-204ENST00000432425 DDX5P17844 614 aaKnown RBP3.34□□□□□ -1.87
CLK1-204ENST00000432425 SHMT1P34896 483 aa3.34□□□□□ -1.87
CLK1-204ENST00000432425 TMPOP42166 694 aaKnown RBP3.34□□□□□ -1.87
CLK1-204ENST00000432425 CLCNKAP51800 687 aa3.34□□□□□ -1.87
CLK1-204ENST00000432425 SLC20A2Q08357 652 aa3.34□□□□□ -1.87
CLK1-204ENST00000432425 GALNT2Q10471 571 aa3.34□□□□□ -1.87
CLK1-204ENST00000432425 EIF2S3LQ2VIR3 472 aaKnown RBP3.34□□□□□ -1.87
CLK1-204ENST00000432425 KRTAP24-1Q3LI83 254 aa3.34□□□□□ -1.87
CLK1-204ENST00000432425 SLC45A4Q5BKX6 768 aa3.34□□□□□ -1.87
CLK1-204ENST00000432425 FBXO46Q6PJ61 603 aaPredicted RBP3.34□□□□□ -1.87
CLK1-204ENST00000432425 TRMT1LQ7Z2T5 733 aaKnown RBP3.34□□□□□ -1.87
CLK1-204ENST00000432425 SATL1Q86VE3 508 aa3.34□□□□□ -1.87
CLK1-204ENST00000432425 ZNF354CQ86Y25 554 aa3.34□□□□□ -1.87
CLK1-204ENST00000432425 HUS1BQ8NHY5 278 aa3.34□□□□□ -1.87
CLK1-204ENST00000432425 USP13Q92995 863 aaPredicted RBP3.34□□□□□ -1.87
CLK1-204ENST00000432425 KLHL29Q96CT2 875 aa3.34□□□□□ -1.87
CLK1-204ENST00000432425 APOPT1Q96IL0 206 aa3.34□□□□□ -1.87
CLK1-204ENST00000432425 TTC14Q96N46 770 aa3.34□□□□□ -1.87
CLK1-204ENST00000432425 LBHD1Q9BQE6 289 aaPredicted RBP3.34□□□□□ -1.87
CLK1-204ENST00000432425 MMP28Q9H239 520 aa3.34□□□□□ -1.87
CLK1-204ENST00000432425 LRRC4Q9HBW1 653 aa3.34□□□□□ -1.87
CLK1-204ENST00000432425 PCDH9Q9HC56 1237 aa3.34□□□□□ -1.87
CLK1-204ENST00000432425 RRN3Q9NYV6 651 aa3.34□□□□□ -1.87
CLK1-204ENST00000432425 MPP6Q9NZW5 540 aa3.34□□□□□ -1.87
CLK1-204ENST00000432425 TTC7AQ9ULT0 858 aaPredicted RBP3.34□□□□□ -1.87
CLK1-204ENST00000432425 A4GNTQ9UNA3 340 aa3.34□□□□□ -1.87
CLK1-204ENST00000432425 ERVK-11Q9UQG0 969 aa3.34□□□□□ -1.87
CLK1-204ENST00000432425 CCDC196A0A1B0GTZ2 297 aa3.33□□□□□ -1.88
CLK1-204ENST00000432425 FAM172BPA6NC97 362 aa3.33□□□□□ -1.88
CLK1-204ENST00000432425 GOLGA6L9A6NEM1 432 aa3.33□□□□□ -1.88
CLK1-204ENST00000432425 PRR23AA6NEV1 266 aa3.33□□□□□ -1.88
CLK1-204ENST00000432425 C16orf97H3BN30 126 aa3.33□□□□□ -1.88
CLK1-204ENST00000432425 FGF17O60258 216 aa3.33□□□□□ -1.88
CLK1-204ENST00000432425 GAS8-AS1O95177 125 aa3.33□□□□□ -1.88
CLK1-204ENST00000432425 MAOAP21397 527 aa3.33□□□□□ -1.88
CLK1-204ENST00000432425 PAFAH1B1P43034 410 aa3.33□□□□□ -1.88
CLK1-204ENST00000432425 METAP2P50579 478 aaKnown RBP eCLIP3.33□□□□□ -1.88
CLK1-204ENST00000432425 SORDQ00796 357 aa3.33□□□□□ -1.88
CLK1-204ENST00000432425 RELQ04864 619 aaPredicted RBP3.33□□□□□ -1.88
CLK1-204ENST00000432425 RBBP5Q15291 538 aaKnown RBP3.33□□□□□ -1.88
CLK1-204ENST00000432425 KRT24Q2M2I5 525 aa3.33□□□□□ -1.88
CLK1-204ENST00000432425 KCNT1Q5JUK3 1230 aa3.33□□□□□ -1.88
CLK1-204ENST00000432425 METTL2BQ6P1Q9 378 aaKnown RBP3.33□□□□□ -1.88
CLK1-204ENST00000432425 FOXRED2Q8IWF2 684 aa3.33□□□□□ -1.88
CLK1-204ENST00000432425 ODF3L1Q8IXM7 274 aa3.33□□□□□ -1.88
CLK1-204ENST00000432425 OR13A1Q8NGR1 328 aa3.33□□□□□ -1.88
CLK1-204ENST00000432425 ZBTB10Q96DT7 871 aa3.33□□□□□ -1.88
CLK1-204ENST00000432425 METTL2AQ96IZ6 378 aaKnown RBP3.33□□□□□ -1.88
CLK1-204ENST00000432425 SH3GL2Q99962 352 aa3.33□□□□□ -1.88
CLK1-204ENST00000432425 ABCF3Q9NUQ8 709 aa3.33□□□□□ -1.88
CLK1-204ENST00000432425 KCND2Q9NZV8 630 aa3.33□□□□□ -1.88
CLK1-204ENST00000432425 AMDHD2Q9Y303 409 aa3.33□□□□□ -1.88
CLK1-204ENST00000432425 SCINQ9Y6U3 715 aa3.33□□□□□ -1.88
CLK1-204ENST00000432425 SEC14L5O43304 696 aa3.33□□□□□ -1.88
CLK1-204ENST00000432425 ANOS1P23352 680 aa3.33□□□□□ -1.88
CLK1-204ENST00000432425 GNL1P36915 607 aaPredicted RBP3.33□□□□□ -1.88
CLK1-204ENST00000432425 ARL1P40616 181 aaPredicted RBP3.33□□□□□ -1.88
CLK1-204ENST00000432425 USP8P40818 1118 aa3.33□□□□□ -1.88
CLK1-204ENST00000432425 MAPK9P45984 424 aa3.33□□□□□ -1.88
CLK1-204ENST00000432425 GNAQP50148 359 aa3.33□□□□□ -1.88
CLK1-204ENST00000432425 FUT6P51993 359 aa3.33□□□□□ -1.88
CLK1-204ENST00000432425 NAE1Q13564 534 aa3.33□□□□□ -1.88
CLK1-204ENST00000432425 C2orf68Q2NKX9 166 aa3.33□□□□□ -1.88
CLK1-204ENST00000432425 SLC9B1Q4ZJI4 515 aa3.33□□□□□ -1.88
CLK1-204ENST00000432425 GGNBP1Q5YKI7 109 aa3.33□□□□□ -1.88
CLK1-204ENST00000432425 SLC9B2Q86UD5 537 aa3.33□□□□□ -1.88
CLK1-204ENST00000432425 TMPRSS12Q86WS5 348 aa3.33□□□□□ -1.88
CLK1-204ENST00000432425 TICAM2Q86XR7 235 aa3.33□□□□□ -1.88
CLK1-204ENST00000432425 SPATA6LQ8N4H0 392 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms