RNA–Protein interactions for RNA: ENST00000430548.5

AC004540.1-202, humanhuman

TSL 4

Gene AC004540.1, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-202ENST00000430548 KIAA1524Q8TCG1 905 aa18.65■□□□□ 0.58
AC004540.1-202ENST00000430548 NUS1Q96E22 293 aa18.65■□□□□ 0.58
AC004540.1-202ENST00000430548 SGF29Q96ES7 293 aa18.65■□□□□ 0.58
AC004540.1-202ENST00000430548 TEX101Q9BY14 249 aa18.65■□□□□ 0.58
AC004540.1-202ENST00000430548 FRMD8Q9BZ67 464 aaPredicted RBP18.65■□□□□ 0.58
AC004540.1-202ENST00000430548 KCTD5Q9NXV2 234 aa18.65■□□□□ 0.58
AC004540.1-202ENST00000430548 CWC15Q9P013 229 aaKnown RBP18.65■□□□□ 0.58
AC004540.1-202ENST00000430548 FOXJ2Q9P0K8 574 aa18.65■□□□□ 0.58
AC004540.1-202ENST00000430548 SPTA1P02549 2419 aa18.64■□□□□ 0.58
AC004540.1-202ENST00000430548 C9orf172C9J069 976 aa18.64■□□□□ 0.57
AC004540.1-202ENST00000430548 PDE2AO00408 941 aaPredicted RBP18.64■□□□□ 0.57
AC004540.1-202ENST00000430548 DAPK3O43293 454 aa18.64■□□□□ 0.57
AC004540.1-202ENST00000430548 RNF8O76064 485 aa18.64■□□□□ 0.57
AC004540.1-202ENST00000430548 HEXIM1O94992 359 aaKnown RBP18.64■□□□□ 0.57
AC004540.1-202ENST00000430548 CCNB1P14635 433 aa18.64■□□□□ 0.57
AC004540.1-202ENST00000430548 LHCGRP22888 699 aa18.64■□□□□ 0.57
AC004540.1-202ENST00000430548 TEAD1P28347 426 aa18.64■□□□□ 0.57
AC004540.1-202ENST00000430548 HSPA9P38646 679 aaKnown RBP18.64■□□□□ 0.57
AC004540.1-202ENST00000430548 DPYSL2Q16555 572 aa18.64■□□□□ 0.57
AC004540.1-202ENST00000430548 CLPPQ16740 277 aaPredicted RBP18.64■□□□□ 0.57
AC004540.1-202ENST00000430548 XKR5Q6UX68 686 aa18.64■□□□□ 0.57
AC004540.1-202ENST00000430548 HEATR4Q86WZ0 1026 aa18.64■□□□□ 0.57
AC004540.1-202ENST00000430548 EXD3Q8N9H8 876 aa18.64■□□□□ 0.57
AC004540.1-202ENST00000430548 DTD2Q96FN9 168 aa18.64■□□□□ 0.57
AC004540.1-202ENST00000430548 CMKLR1Q99788 373 aa18.64■□□□□ 0.57
AC004540.1-202ENST00000430548 MGME1Q9BQP7 344 aa18.64■□□□□ 0.57
AC004540.1-202ENST00000430548 DPEP2Q9H4A9 486 aa18.64■□□□□ 0.57
AC004540.1-202ENST00000430548 TRNAU1APQ9NX07 287 aaKnown RBP18.64■□□□□ 0.57
AC004540.1-202ENST00000430548 A0A1W2PQC6 194 aa18.63■□□□□ 0.57
AC004540.1-202ENST00000430548 LRRC53A6NM62 1247 aa18.63■□□□□ 0.57
AC004540.1-202ENST00000430548 PSMD11O00231 422 aa18.63■□□□□ 0.57
AC004540.1-202ENST00000430548 PRPSAP2O60256 369 aa18.63■□□□□ 0.57
AC004540.1-202ENST00000430548 CPNE6O95741 557 aa18.63■□□□□ 0.57
AC004540.1-202ENST00000430548 CPP00450 1065 aa18.63■□□□□ 0.57
AC004540.1-202ENST00000430548 CEACAM5P06731 702 aa18.63■□□□□ 0.57
AC004540.1-202ENST00000430548 GZMAP12544 262 aa18.63■□□□□ 0.57
AC004540.1-202ENST00000430548 TNFAIP3P21580 790 aa18.63■□□□□ 0.57
AC004540.1-202ENST00000430548 CD82P27701 267 aa18.63■□□□□ 0.57
AC004540.1-202ENST00000430548 VIPR1P32241 457 aa18.63■□□□□ 0.57
AC004540.1-202ENST00000430548 PRKCIP41743 596 aa18.63■□□□□ 0.57
AC004540.1-202ENST00000430548 ARHGEF7Q14155 803 aa18.63■□□□□ 0.57
AC004540.1-202ENST00000430548 C16orf72Q14CZ0 275 aa18.63■□□□□ 0.57
AC004540.1-202ENST00000430548 ACOX1Q15067 660 aa18.63■□□□□ 0.57
AC004540.1-202ENST00000430548 MAP9Q49MG5 647 aa18.63■□□□□ 0.57
AC004540.1-202ENST00000430548 E4F1Q66K89 784 aaPredicted RBP18.63■□□□□ 0.57
AC004540.1-202ENST00000430548 SASS6Q6UVJ0 657 aa18.63■□□□□ 0.57
AC004540.1-202ENST00000430548 PGBD5Q8N414 524 aa18.63■□□□□ 0.57
AC004540.1-202ENST00000430548 MCCC1Q96RQ3 725 aaPredicted RBP18.63■□□□□ 0.57
AC004540.1-202ENST00000430548 NUDCD1Q96RS6 583 aa18.63■□□□□ 0.57
AC004540.1-202ENST00000430548 SEMA6CQ9H3T2 930 aa18.63■□□□□ 0.57
AC004540.1-202ENST00000430548 CARS2Q9HA77 564 aaKnown RBP18.63■□□□□ 0.57
AC004540.1-202ENST00000430548 PHPT1Q9NRX4 125 aaPredicted RBP18.63■□□□□ 0.57
AC004540.1-202ENST00000430548 SPATS2LQ9NUQ6 558 aaKnown RBP18.63■□□□□ 0.57
AC004540.1-202ENST00000430548 PCDHGA4Q9Y5G9 962 aa18.63■□□□□ 0.57
AC004540.1-202ENST00000430548 MAST4O15021 2626 aa18.63■□□□□ 0.57
AC004540.1-202ENST00000430548 TMCO5BA8MYB1 307 aa18.62■□□□□ 0.57
AC004540.1-202ENST00000430548 FUCA1P04066 466 aa18.62■□□□□ 0.57
AC004540.1-202ENST00000430548 PCK1P35558 622 aa18.62■□□□□ 0.57
AC004540.1-202ENST00000430548 MAZP56270 477 aaKnown RBP18.62■□□□□ 0.57
AC004540.1-202ENST00000430548 CDK3Q00526 305 aa18.62■□□□□ 0.57
AC004540.1-202ENST00000430548 TRAF2Q12933 501 aa18.62■□□□□ 0.57
AC004540.1-202ENST00000430548 ZNF235Q14590 738 aa18.62■□□□□ 0.57
AC004540.1-202ENST00000430548 RALGPS1Q5JS13 557 aa18.62■□□□□ 0.57
AC004540.1-202ENST00000430548 GSDMCQ9BYG8 508 aa18.62■□□□□ 0.57
AC004540.1-202ENST00000430548 ZWILCHQ9H900 591 aa18.62■□□□□ 0.57
AC004540.1-202ENST00000430548 SLC17A4Q9Y2C5 497 aa18.62■□□□□ 0.57
AC004540.1-202ENST00000430548 ST14Q9Y5Y6 855 aa18.62■□□□□ 0.57
AC004540.1-202ENST00000430548 SCINQ9Y6U3 715 aa18.62■□□□□ 0.57
AC004540.1-202ENST00000430548 ZNF106Q9H2Y7 1883 aaKnown RBP18.61■□□□□ 0.57
AC004540.1-202ENST00000430548 NPIPB15A6NHN6 443 aaPredicted RBP18.61■□□□□ 0.57
AC004540.1-202ENST00000430548 A8MX80 341 aa18.61■□□□□ 0.57
AC004540.1-202ENST00000430548 HGSO14964 777 aaPredicted RBP18.61■□□□□ 0.57
AC004540.1-202ENST00000430548 TEX33O43247 280 aa18.61■□□□□ 0.57
AC004540.1-202ENST00000430548 B4GAT1O43505 415 aa18.61■□□□□ 0.57
AC004540.1-202ENST00000430548 SLC28A2O43868 658 aa18.61■□□□□ 0.57
AC004540.1-202ENST00000430548 MAFKO60675 156 aa18.61■□□□□ 0.57
AC004540.1-202ENST00000430548 FGF1P05230 155 aa18.61■□□□□ 0.57
AC004540.1-202ENST00000430548 CDK11BP21127 795 aaKnown RBP18.61■□□□□ 0.57
AC004540.1-202ENST00000430548 IL1R2P27930 398 aa18.61■□□□□ 0.57
AC004540.1-202ENST00000430548 ILF3Q12906 894 aaKnown RBP eCLIP18.61■□□□□ 0.57
AC004540.1-202ENST00000430548 PHF19Q5T6S3 580 aa18.61■□□□□ 0.57
AC004540.1-202ENST00000430548 USP53Q70EK8 1073 aa18.61■□□□□ 0.57
AC004540.1-202ENST00000430548 ZNF571Q7Z3V5 609 aaPredicted RBP18.61■□□□□ 0.57
AC004540.1-202ENST00000430548 ZFAND4Q86XD8 727 aa18.61■□□□□ 0.57
AC004540.1-202ENST00000430548 PAF1Q8N7H5 531 aa18.61■□□□□ 0.57
AC004540.1-202ENST00000430548 ZDHHC1Q8WTX9 485 aa18.61■□□□□ 0.57
AC004540.1-202ENST00000430548 PTCD2Q8WV60 388 aaKnown RBP18.61■□□□□ 0.57
AC004540.1-202ENST00000430548 USP7Q93009 1102 aa18.61■□□□□ 0.57
AC004540.1-202ENST00000430548 HAUS4Q9H6D7 363 aa18.61■□□□□ 0.57
AC004540.1-202ENST00000430548 RDH14Q9HBH5 336 aa18.61■□□□□ 0.57
AC004540.1-202ENST00000430548 ETNK2Q9NVF9 386 aa18.61■□□□□ 0.57
AC004540.1-202ENST00000430548 AIPL1Q9NZN9 384 aa18.61■□□□□ 0.57
AC004540.1-202ENST00000430548 SEPT10Q9P0V9 454 aa18.61■□□□□ 0.57
AC004540.1-202ENST00000430548 TAAR2Q9P1P5 351 aa18.61■□□□□ 0.57
AC004540.1-202ENST00000430548 CNOT8Q9UFF9 292 aaKnown RBP18.61■□□□□ 0.57
AC004540.1-202ENST00000430548 PCDHGC4Q9Y5F7 938 aa18.61■□□□□ 0.57
AC004540.1-202ENST00000430548 PTPN13Q12923 2485 aa18.6■□□□□ 0.57
AC004540.1-202ENST00000430548 TTC24A2A3L6 582 aaPredicted RBP18.6■□□□□ 0.57
AC004540.1-202ENST00000430548 H3BRJ5 948 aa18.6■□□□□ 0.57
AC004540.1-202ENST00000430548 DDX3XO00571 662 aaKnown RBP eCLIP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms