RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 STX19Q8N4C7 294 aa12.95□□□□□ -0.34
PTCH1-207ENST00000429896 NKD2Q969F2 451 aaPredicted RBP12.95□□□□□ -0.34
PTCH1-207ENST00000429896 FAM111AQ96PZ2 611 aa12.95□□□□□ -0.34
PTCH1-207ENST00000429896 FAM83DQ9H4H8 585 aa12.95□□□□□ -0.34
PTCH1-207ENST00000429896 PRR23D1E9PI22 279 aaPredicted RBP12.94□□□□□ -0.34
PTCH1-207ENST00000429896 UBXN8O00124 270 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 BTN3A1O00481 513 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 KLF8O95600 359 aaPredicted RBP12.94□□□□□ -0.34
PTCH1-207ENST00000429896 PRR23D2P0DMB1 279 aaPredicted RBP12.94□□□□□ -0.34
PTCH1-207ENST00000429896 LSP1P33241 339 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 RANBP1P43487 201 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 DHPSP49366 369 aaPredicted RBP12.94□□□□□ -0.34
PTCH1-207ENST00000429896 NEK3P51956 506 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 PUS10Q3MIT2 529 aaKnown RBP12.94□□□□□ -0.34
PTCH1-207ENST00000429896 RAVER1Q8IY67 606 aaKnown RBP12.94□□□□□ -0.34
PTCH1-207ENST00000429896 KIF2BQ8N4N8 673 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 ANKRD49Q8WVL7 239 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 CCT8L2Q96SF2 557 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 ZNF556Q9HAH1 456 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 HCFC1R1Q9NWW0 138 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 PCNAP12004 261 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 ALADP13716 330 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 EIF2B5Q13144 721 aaKnown RBP12.94□□□□□ -0.34
PTCH1-207ENST00000429896 MBTPS1Q14703 1052 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 DHCR24Q15392 516 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 PHYKPLQ8IUZ5 450 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 DCAF4L2Q8NA75 395 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 HDAC10Q969S8 669 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 PLEKHA8Q96JA3 519 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 SALL4Q9UJQ4 1053 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 SNAP91O60641 907 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 STC2O76061 302 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 SLC35G4P0C7Q5 338 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 FECHP22830 423 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 MAT2AP31153 395 aaKnown RBP12.94□□□□□ -0.34
PTCH1-207ENST00000429896 ACVRL1P37023 503 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 CLCN5P51795 746 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 MRPS15P82914 257 aaKnown RBP12.94□□□□□ -0.34
PTCH1-207ENST00000429896 OGDHQ02218 1023 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 PPIDQ08752 370 aaKnown RBP12.94□□□□□ -0.34
PTCH1-207ENST00000429896 C9orf50Q5SZB4 431 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 HOMEZQ8IX15 550 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 DEFB123Q8N688 67 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 EBNA1BP2Q99848 306 aaKnown RBP12.94□□□□□ -0.34
PTCH1-207ENST00000429896 FAM126AQ9BYI3 521 aaPredicted RBP12.94□□□□□ -0.34
PTCH1-207ENST00000429896 CYP4F12Q9HCS2 524 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 PGS1Q32NB8 556 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 CCSAPQ6IQ19 270 aaPredicted RBP12.94□□□□□ -0.34
PTCH1-207ENST00000429896 PARP9Q8IXQ6 854 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 THTPAQ9BU02 230 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 SUV39H2Q9H5I1 410 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 CD84Q9UIB8 345 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 CDYLQ9Y232 598 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 AP2A1O95782 977 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 TCF3P15923 654 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 GRIA2P42262 883 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 MAPRE2Q15555 327 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 CERCAMQ5T4B2 595 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 ZNF852Q6ZMS4 543 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 TPRG1Q6ZUI0 275 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 NKAPQ8N5F7 415 aaKnown RBP12.94□□□□□ -0.34
PTCH1-207ENST00000429896 OR4K2Q8NGD2 314 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 ART4Q93070 314 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 WWP1Q9H0M0 922 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 PIAS3Q9Y6X2 628 aa12.94□□□□□ -0.34
PTCH1-207ENST00000429896 TM7SF2O76062 418 aa12.93□□□□□ -0.34
PTCH1-207ENST00000429896 TSHRP16473 764 aa12.93□□□□□ -0.34
PTCH1-207ENST00000429896 OR2AP1Q8NGE2 309 aa12.93□□□□□ -0.34
PTCH1-207ENST00000429896 SPATA22Q8NHS9 363 aa12.93□□□□□ -0.34
PTCH1-207ENST00000429896 H0YC42 278 aa12.93□□□□□ -0.34
PTCH1-207ENST00000429896 MAP2K7O14733 419 aa12.93□□□□□ -0.34
PTCH1-207ENST00000429896 PCYT1AP49585 367 aa12.93□□□□□ -0.34
PTCH1-207ENST00000429896 PEX5P50542 639 aa12.93□□□□□ -0.34
PTCH1-207ENST00000429896 NEK2P51955 445 aa12.93□□□□□ -0.34
PTCH1-207ENST00000429896 ANKRD54Q6NXT1 300 aa12.93□□□□□ -0.34
PTCH1-207ENST00000429896 ZNF783Q6ZMS7 281 aa12.93□□□□□ -0.34
PTCH1-207ENST00000429896 WDTC1Q8N5D0 677 aa12.93□□□□□ -0.34
PTCH1-207ENST00000429896 PTCD2Q8WV60 388 aaKnown RBP12.93□□□□□ -0.34
PTCH1-207ENST00000429896 RETREG1Q9H6L5 497 aa12.93□□□□□ -0.34
PTCH1-207ENST00000429896 MANSC1Q9H8J5 431 aa12.93□□□□□ -0.34
PTCH1-207ENST00000429896 LOC100653049A0A140TA62 436 aa12.93□□□□□ -0.34
PTCH1-207ENST00000429896 ABLIM1O14639 778 aa12.93□□□□□ -0.34
PTCH1-207ENST00000429896 ATP5HO75947 161 aa12.93□□□□□ -0.34
PTCH1-207ENST00000429896 KRT34O76011 436 aa12.93□□□□□ -0.34
PTCH1-207ENST00000429896 HPCAP84074 193 aa12.93□□□□□ -0.34
PTCH1-207ENST00000429896 SLC25A11Q02978 314 aaKnown RBP12.93□□□□□ -0.34
PTCH1-207ENST00000429896 CACNG1Q06432 222 aa12.93□□□□□ -0.34
PTCH1-207ENST00000429896 MYLK3Q32MK0 819 aa12.93□□□□□ -0.34
PTCH1-207ENST00000429896 Q6ZVU0 165 aa12.93□□□□□ -0.34
PTCH1-207ENST00000429896 ADH1BP00325 375 aa12.93□□□□□ -0.34
PTCH1-207ENST00000429896 PTPRNQ16849 979 aa12.93□□□□□ -0.34
PTCH1-207ENST00000429896 GRAMD1AQ96CP6 724 aa12.93□□□□□ -0.34
PTCH1-207ENST00000429896 CNBD2Q96M20 576 aa12.93□□□□□ -0.34
PTCH1-207ENST00000429896 TEKT5Q96M29 485 aa12.93□□□□□ -0.34
PTCH1-207ENST00000429896 SPATA6Q9NWH7 488 aaPredicted RBP12.93□□□□□ -0.34
PTCH1-207ENST00000429896 H3BM21 787 aa12.93□□□□□ -0.34
PTCH1-207ENST00000429896 SLC31A1O15431 190 aa12.93□□□□□ -0.34
PTCH1-207ENST00000429896 CNTN5O94779 1100 aa12.93□□□□□ -0.34
PTCH1-207ENST00000429896 TRPC1P48995 793 aa12.93□□□□□ -0.34
PTCH1-207ENST00000429896 PRKCQQ04759 706 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms