RNA–Protein interactions for RNA: ENST00000428950.2

CCDC144A-208, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5

Gene CCDC144A, Length 780 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-208ENST00000428950 A0A1W2PS18 150 aa3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 GOLGA6L9A6NEM1 432 aa3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 TMEM202A6NGA9 273 aa3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 EIF3FO00303 357 aaPredicted RBP3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 SLC22A3O75751 556 aa3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 CGAP01215 116 aa3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 ATP1A1P05023 1023 aaKnown RBP3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 CDH1P12830 882 aa3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 HLA-DOBP13765 273 aa3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 MAOAP21397 527 aa3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 MARK3P27448 753 aa3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 SHMT1P34896 483 aa3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 USP8P40818 1118 aa3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 IL15P40933 162 aaPredicted RBP3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 TMPOP42166 694 aaKnown RBP3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 PPP2R5BQ15173 497 aa3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 KRT24Q2M2I5 525 aa3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 EIF2S3LQ2VIR3 472 aaKnown RBP3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 KCNT1Q5JUK3 1230 aa3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 ADAM5Q6NVV9 412 aa3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 RGMBQ6NW40 437 aa3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 KCTD18Q6PI47 426 aaPredicted RBP3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 FBXO46Q6PJ61 603 aaPredicted RBP3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 C19orf48Q6RUI8 117 aa3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 LCTLQ6UWM7 567 aa3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 SLC36A4Q6YBV0 504 aa3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 RRM2BQ7LG56 351 aa3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 TMEM219Q86XT9 240 aa3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 TDRPQ86YL5 185 aa3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 CIARTQ8N365 385 aaPredicted RBP3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 ZCCHC9Q8N567 271 aaKnown RBP3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 ZBTB2Q8N680 514 aa3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 OR13A1Q8NGR1 328 aa3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 BBS10Q8TAM1 723 aa3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 LBHD1Q9BQE6 289 aaPredicted RBP3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 GPR63Q9BZJ6 419 aa3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 CSTL1Q9H114 145 aa3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 TMEM160Q9NX00 188 aa3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 SLC25A10Q9UBX3 287 aaPredicted RBP3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 FBXO9Q9UK97 447 aaPredicted RBP3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 POU2F3Q9UKI9 436 aa3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 AMDHD2Q9Y303 409 aa3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 LSM4Q9Y4Z0 139 aaKnown RBP3.1□□□□□ -1.91
CCDC144A-208ENST00000428950 TEX13CA0A0J9YWL9 993 aa3.09□□□□□ -1.91
CCDC144A-208ENST00000428950 ASPDHA6ND91 283 aa3.09□□□□□ -1.91
CCDC144A-208ENST00000428950 TAF4O00268 1085 aa3.09□□□□□ -1.91
CCDC144A-208ENST00000428950 PAK4O96013 591 aaPredicted RBP3.09□□□□□ -1.91
CCDC144A-208ENST00000428950 IFIT1P09914 478 aaKnown RBP3.09□□□□□ -1.91
CCDC144A-208ENST00000428950 CFC1BP0CG36 223 aa3.09□□□□□ -1.91
CCDC144A-208ENST00000428950 CFC1P0CG37 223 aa3.09□□□□□ -1.91
CCDC144A-208ENST00000428950 IRF1P10914 325 aa3.09□□□□□ -1.91
CCDC144A-208ENST00000428950 DDX5P17844 614 aaKnown RBP3.09□□□□□ -1.91
CCDC144A-208ENST00000428950 S1PR1P21453 382 aa3.09□□□□□ -1.91
CCDC144A-208ENST00000428950 RRM1P23921 792 aa3.09□□□□□ -1.91
CCDC144A-208ENST00000428950 HNRNPH2P55795 449 aaKnown RBP3.09□□□□□ -1.91
CCDC144A-208ENST00000428950 PITX1P78337 314 aaPredicted RBP3.09□□□□□ -1.91
CCDC144A-208ENST00000428950 CEP85LQ5SZL2 805 aa3.09□□□□□ -1.91
CCDC144A-208ENST00000428950 IRAK1BP1Q5VVH5 260 aa3.09□□□□□ -1.91
CCDC144A-208ENST00000428950 NAA35Q5VZE5 725 aa3.09□□□□□ -1.91
CCDC144A-208ENST00000428950 CPLX2Q6PUV4 134 aaKnown RBP3.09□□□□□ -1.91
CCDC144A-208ENST00000428950 DSG4Q86SJ6 1040 aa3.09□□□□□ -1.91
CCDC144A-208ENST00000428950 WDR63Q8IWG1 891 aa3.09□□□□□ -1.91
CCDC144A-208ENST00000428950 OR2AK2Q8NG84 335 aa3.09□□□□□ -1.91
CCDC144A-208ENST00000428950 HUS1BQ8NHY5 278 aa3.09□□□□□ -1.91
CCDC144A-208ENST00000428950 SLC20A1Q8WUM9 679 aa3.09□□□□□ -1.91
CCDC144A-208ENST00000428950 TMEM255BQ8WV15 326 aa3.09□□□□□ -1.91
CCDC144A-208ENST00000428950 WBP2Q969T9 261 aa3.09□□□□□ -1.91
CCDC144A-208ENST00000428950 GCC1Q96CN9 775 aa3.09□□□□□ -1.91
CCDC144A-208ENST00000428950 SH3GL2Q99962 352 aa3.09□□□□□ -1.91
CCDC144A-208ENST00000428950 KCNN2Q9H2S1 579 aa3.09□□□□□ -1.91
CCDC144A-208ENST00000428950 FBRSL1Q9HCM7 1045 aaKnown RBP3.09□□□□□ -1.91
CCDC144A-208ENST00000428950 ZNF334Q9HCZ1 680 aaPredicted RBP3.09□□□□□ -1.91
CCDC144A-208ENST00000428950 PDS5AQ29RF7 1337 aaKnown RBP3.09□□□□□ -1.91
CCDC144A-208ENST00000428950 FAM72CH0Y354 149 aa3.08□□□□□ -1.92
CCDC144A-208ENST00000428950 IFNL4K9M1U5 179 aa3.08□□□□□ -1.92
CCDC144A-208ENST00000428950 IFRD1O00458 451 aaPredicted RBP3.08□□□□□ -1.92
CCDC144A-208ENST00000428950 CAPN9O14815 690 aa3.08□□□□□ -1.92
CCDC144A-208ENST00000428950 PEX14O75381 377 aa3.08□□□□□ -1.92
CCDC144A-208ENST00000428950 COX7A2P14406 83 aa3.08□□□□□ -1.92
CCDC144A-208ENST00000428950 ITGA2P17301 1181 aa3.08□□□□□ -1.92
CCDC144A-208ENST00000428950 GABRB2P47870 512 aa3.08□□□□□ -1.92
CCDC144A-208ENST00000428950 FMO5P49326 533 aa3.08□□□□□ -1.92
CCDC144A-208ENST00000428950 METAP2P50579 478 aaKnown RBP eCLIP3.08□□□□□ -1.92
CCDC144A-208ENST00000428950 CRIP2P52943 208 aaPredicted RBP3.08□□□□□ -1.92
CCDC144A-208ENST00000428950 UFM1P61960 85 aa3.08□□□□□ -1.92
CCDC144A-208ENST00000428950 CCDC6Q16204 474 aa3.08□□□□□ -1.92
CCDC144A-208ENST00000428950 TAF12Q16514 161 aa3.08□□□□□ -1.92
CCDC144A-208ENST00000428950 C2orf68Q2NKX9 166 aa3.08□□□□□ -1.92
CCDC144A-208ENST00000428950 SLC45A4Q5BKX6 768 aa3.08□□□□□ -1.92
CCDC144A-208ENST00000428950 FAM72AQ5TYM5 149 aa3.08□□□□□ -1.92
CCDC144A-208ENST00000428950 PLEKHA7Q6IQ23 1121 aa3.08□□□□□ -1.92
CCDC144A-208ENST00000428950 FAM72DQ6L9T8 149 aa3.08□□□□□ -1.92
CCDC144A-208ENST00000428950 FBXL22Q6P050 247 aa3.08□□□□□ -1.92
CCDC144A-208ENST00000428950 METTL2BQ6P1Q9 378 aaKnown RBP3.08□□□□□ -1.92
CCDC144A-208ENST00000428950 SLC26A9Q7LBE3 791 aa3.08□□□□□ -1.92
CCDC144A-208ENST00000428950 NFE4Q86UQ8 179 aa3.08□□□□□ -1.92
CCDC144A-208ENST00000428950 FAM72BQ86X60 149 aa3.08□□□□□ -1.92
CCDC144A-208ENST00000428950 KMT5CQ86Y97 462 aa3.08□□□□□ -1.92
CCDC144A-208ENST00000428950 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.08□□□□□ -1.92
CCDC144A-208ENST00000428950 C1orf87Q8N0U7 546 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms