RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 ITGB6P18564 788 aa16.57■□□□□ 0.24
VARS-216ENST00000428445 TNFAIP3P21580 790 aa16.57■□□□□ 0.24
VARS-216ENST00000428445 MPSTP25325 297 aa16.57■□□□□ 0.24
VARS-216ENST00000428445 HTR7P34969 479 aa16.57■□□□□ 0.24
VARS-216ENST00000428445 TBR1Q16650 682 aa16.57■□□□□ 0.24
VARS-216ENST00000428445 MAP9Q49MG5 647 aa16.57■□□□□ 0.24
VARS-216ENST00000428445 NKAIN2Q5VXU1 208 aa16.57■□□□□ 0.24
VARS-216ENST00000428445 RFLNAQ6ZTI6 216 aa16.57■□□□□ 0.24
VARS-216ENST00000428445 RFX8Q6ZV50 586 aa16.57■□□□□ 0.24
VARS-216ENST00000428445 IRF2BP2Q7Z5L9 587 aa16.57■□□□□ 0.24
VARS-216ENST00000428445 PGBD5Q8N414 524 aa16.57■□□□□ 0.24
VARS-216ENST00000428445 ZDHHC1Q8WTX9 485 aa16.57■□□□□ 0.24
VARS-216ENST00000428445 PDCD6IPQ8WUM4 868 aaKnown RBP16.57■□□□□ 0.24
VARS-216ENST00000428445 COQ10AQ96MF6 247 aa16.57■□□□□ 0.24
VARS-216ENST00000428445 SMIM14Q96QK8 99 aa16.57■□□□□ 0.24
VARS-216ENST00000428445 WDR26Q9H7D7 661 aa16.57■□□□□ 0.24
VARS-216ENST00000428445 PCDHGA4Q9Y5G9 962 aa16.57■□□□□ 0.24
VARS-216ENST00000428445 CFAP69A5D8W1 941 aa16.56■□□□□ 0.24
VARS-216ENST00000428445 TNFRSF10CO14798 259 aa16.56■□□□□ 0.24
VARS-216ENST00000428445 ECEL1O95672 775 aa16.56■□□□□ 0.24
VARS-216ENST00000428445 CEACAM5P06731 702 aa16.56■□□□□ 0.24
VARS-216ENST00000428445 PNLIPP16233 465 aa16.56■□□□□ 0.24
VARS-216ENST00000428445 MIPP30301 263 aa16.56■□□□□ 0.24
VARS-216ENST00000428445 GNPDA1P46926 289 aa16.56■□□□□ 0.24
VARS-216ENST00000428445 ARSDP51689 593 aa16.56■□□□□ 0.24
VARS-216ENST00000428445 IL10RBQ08334 325 aa16.56■□□□□ 0.24
VARS-216ENST00000428445 NSUN2Q08J23 767 aaKnown RBP eCLIP16.56■□□□□ 0.24
VARS-216ENST00000428445 CNGA3Q16281 694 aa16.56■□□□□ 0.24
VARS-216ENST00000428445 PPP1R2P3Q6NXS1 205 aa16.56■□□□□ 0.24
VARS-216ENST00000428445 APTXQ7Z2E3 356 aaKnown RBP16.56■□□□□ 0.24
VARS-216ENST00000428445 HSD11B1LQ7Z5J1 315 aa16.56■□□□□ 0.24
VARS-216ENST00000428445 HEATR4Q86WZ0 1026 aa16.56■□□□□ 0.24
VARS-216ENST00000428445 GPBAR1Q8TDU6 330 aa16.56■□□□□ 0.24
VARS-216ENST00000428445 CMKLR1Q99788 373 aa16.56■□□□□ 0.24
VARS-216ENST00000428445 SYT11Q9BT88 431 aa16.56■□□□□ 0.24
VARS-216ENST00000428445 HSD3B7Q9H2F3 369 aa16.56■□□□□ 0.24
VARS-216ENST00000428445 ETNK2Q9NVF9 386 aa16.56■□□□□ 0.24
VARS-216ENST00000428445 CWC15Q9P013 229 aaKnown RBP16.56■□□□□ 0.24
VARS-216ENST00000428445 TAAR2Q9P1P5 351 aa16.56■□□□□ 0.24
VARS-216ENST00000428445 HEMK1Q9Y5R4 338 aaPredicted RBP16.56■□□□□ 0.24
VARS-216ENST00000428445 TRBV23OR9-2A0A075B6M9 112 aa16.55■□□□□ 0.24
VARS-216ENST00000428445 GOLGA6CA6NDK9 693 aa16.55■□□□□ 0.24
VARS-216ENST00000428445 GOLGA6BA6NDN3 693 aa16.55■□□□□ 0.24
VARS-216ENST00000428445 NUDT21O43809 227 aaKnown RBP16.55■□□□□ 0.24
VARS-216ENST00000428445 HOXC4P09017 264 aaPredicted RBP16.55■□□□□ 0.24
VARS-216ENST00000428445 GOLGA6DP0CG33 693 aa16.55■□□□□ 0.24
VARS-216ENST00000428445 CCNB1P14635 433 aa16.55■□□□□ 0.24
VARS-216ENST00000428445 TCF4P15884 667 aa16.55■□□□□ 0.24
VARS-216ENST00000428445 CDK11BP21127 795 aaKnown RBP16.55■□□□□ 0.24
VARS-216ENST00000428445 KELP23276 732 aa16.55■□□□□ 0.24
VARS-216ENST00000428445 ETV3P41162 512 aa16.55■□□□□ 0.24
VARS-216ENST00000428445 MAXP61244 160 aa16.55■□□□□ 0.24
VARS-216ENST00000428445 POLR2LP62875 67 aaKnown RBP16.55■□□□□ 0.24
VARS-216ENST00000428445 LBRQ14739 615 aaKnown RBP16.55■□□□□ 0.24
VARS-216ENST00000428445 CLCA4Q14CN2 919 aa16.55■□□□□ 0.24
VARS-216ENST00000428445 PLEKHA7Q6IQ23 1121 aa16.55■□□□□ 0.24
VARS-216ENST00000428445 SLC30A9Q6PML9 568 aa16.55■□□□□ 0.24
VARS-216ENST00000428445 RBM43Q6ZSC3 357 aaKnown RBP16.55■□□□□ 0.24
VARS-216ENST00000428445 TSPAN33Q86UF1 283 aa16.55■□□□□ 0.24
VARS-216ENST00000428445 PIM3Q86V86 326 aa16.55■□□□□ 0.24
VARS-216ENST00000428445 DTX1Q86Y01 620 aa16.55■□□□□ 0.24
VARS-216ENST00000428445 NUS1Q96E22 293 aa16.55■□□□□ 0.24
VARS-216ENST00000428445 ERGIC2Q96RQ1 377 aa16.55■□□□□ 0.24
VARS-216ENST00000428445 GOLGA6AQ9NYA3 693 aa16.55■□□□□ 0.24
VARS-216ENST00000428445 SEPT10Q9P0V9 454 aa16.55■□□□□ 0.24
VARS-216ENST00000428445 SUFUQ9UMX1 484 aa16.55■□□□□ 0.24
VARS-216ENST00000428445 ZFC3H1O60293 1989 aaKnown RBP16.55■□□□□ 0.24
VARS-216ENST00000428445 IGHV5-10-1A0A0J9YXX1 117 aa16.54■□□□□ 0.24
VARS-216ENST00000428445 TMEM191CA6NGB0 347 aa16.54■□□□□ 0.24
VARS-216ENST00000428445 RHPN2P1A8MT19 583 aa16.54■□□□□ 0.24
VARS-216ENST00000428445 EIF3CLB5ME19 914 aaKnown RBP16.54■□□□□ 0.24
VARS-216ENST00000428445 PPM1DO15297 605 aa16.54■□□□□ 0.24
VARS-216ENST00000428445 ARHGAP6O43182 974 aa16.54■□□□□ 0.24
VARS-216ENST00000428445 FGF3P11487 239 aaPredicted RBP16.54■□□□□ 0.24
VARS-216ENST00000428445 MYCLP1P12525 358 aaPredicted RBP16.54■□□□□ 0.24
VARS-216ENST00000428445 ATP1A3P13637 1013 aa16.54■□□□□ 0.24
VARS-216ENST00000428445 CTPS1P17812 591 aa16.54■□□□□ 0.24
VARS-216ENST00000428445 LHCGRP22888 699 aa16.54■□□□□ 0.24
VARS-216ENST00000428445 AMPD1P23109 780 aa16.54■□□□□ 0.24
VARS-216ENST00000428445 CD1CP29017 333 aa16.54■□□□□ 0.24
VARS-216ENST00000428445 DOK6Q6PKX4 331 aa16.54■□□□□ 0.24
VARS-216ENST00000428445 Q6ZVL8 140 aa16.54■□□□□ 0.24
VARS-216ENST00000428445 C17orf82Q86X59 251 aaPredicted RBP16.54■□□□□ 0.24
VARS-216ENST00000428445 FNIP1Q8TF40 1166 aa16.54■□□□□ 0.24
VARS-216ENST00000428445 CCDC74BQ96LY2 380 aa16.54■□□□□ 0.24
VARS-216ENST00000428445 EIF3CQ99613 913 aaKnown RBP16.54■□□□□ 0.24
VARS-216ENST00000428445 NOD2Q9HC29 1040 aa16.54■□□□□ 0.24
VARS-216ENST00000428445 STARD5Q9NSY2 213 aa16.54■□□□□ 0.24
VARS-216ENST00000428445 PARVAQ9NVD7 372 aa16.54■□□□□ 0.24
VARS-216ENST00000428445 TMEM9Q9P0T7 183 aa16.54■□□□□ 0.24
VARS-216ENST00000428445 IL17BQ9UHF5 180 aa16.54■□□□□ 0.24
VARS-216ENST00000428445 CD84Q9UIB8 345 aa16.54■□□□□ 0.24
VARS-216ENST00000428445 TMEM98Q9Y2Y6 226 aa16.54■□□□□ 0.24
VARS-216ENST00000428445 COL12A1Q99715 3063 aa16.54■□□□□ 0.24
VARS-216ENST00000428445 HECTD1Q9ULT8 2610 aa16.53■□□□□ 0.24
VARS-216ENST00000428445 NPIPB15A6NHN6 443 aaPredicted RBP16.53■□□□□ 0.24
VARS-216ENST00000428445 HEXIM1O94992 359 aaKnown RBP16.53■□□□□ 0.24
VARS-216ENST00000428445 CPNE6O95741 557 aa16.53■□□□□ 0.24
VARS-216ENST00000428445 PEX11BO96011 259 aa16.53■□□□□ 0.24
VARS-216ENST00000428445 FERP16591 822 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms