RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 DEFB106AQ8N104 65 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 OR2L5Q8NG80 312 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 ADAMTS19Q8TE59 1207 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 KBTBD7Q8WVZ9 684 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 LPPQ93052 612 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 PHF21BQ96EK2 531 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 Q96MT0 163 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 PDCD2LQ9BRP1 358 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 ROGDIQ9GZN7 287 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 SLC2A4RGQ9NR83 387 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 KLQ9UEF7 1012 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 RGS17Q9UGC6 210 aaPredicted RBP5.74□□□□□ -1.49
HERC4-206ENST00000427635 INVSQ9Y283 1065 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 ZNF726A6NNF4 738 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 RSL1D1O76021 490 aaKnown RBP5.74□□□□□ -1.49
HERC4-206ENST00000427635 CD86P42081 329 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 DLG1Q12959 904 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 NAB1Q13506 487 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 ZNF268Q14587 947 aaPredicted RBP5.74□□□□□ -1.49
HERC4-206ENST00000427635 DDI2Q5TDH0 399 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 ANKS1BQ7Z6G8 1248 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 THAP5Q7Z6K1 395 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 UBE2J2Q8N2K1 259 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 ZNF786Q8N393 782 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 OR10Q1Q8NGQ4 319 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 CENPIQ92674 756 aaPredicted RBP5.74□□□□□ -1.49
HERC4-206ENST00000427635 PLEKHG4BQ96PX9 1271 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 BHLHE41Q9C0J9 482 aaPredicted RBP5.74□□□□□ -1.49
HERC4-206ENST00000427635 BPIFA1Q9NP55 256 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 ENY2Q9NPA8 101 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 MBD2Q9UBB5 411 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 COL1A2P08123 1366 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 FRMPD4Q14CM0 1322 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 NT5C1B-RDH14C9J2C7 533 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 ENPP3O14638 875 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 UBDO15205 165 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 B3GALT2O43825 422 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 PFKMP08237 780 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 SLC35G6P0C7Q6 338 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 ACRP10323 421 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 TIE1P35590 1138 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 SSR2P43308 183 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 FSTL1Q12841 308 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.74□□□□□ -1.49
HERC4-206ENST00000427635 C11orf91Q3C1V1 193 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 C2orf27AQ580R0 203 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 TCHHL1Q5QJ38 904 aaPredicted RBP5.74□□□□□ -1.49
HERC4-206ENST00000427635 RSBN1Q5VWQ0 802 aaPredicted RBP5.74□□□□□ -1.49
HERC4-206ENST00000427635 CAPN13Q6MZZ7 669 aaPredicted RBP5.74□□□□□ -1.49
HERC4-206ENST00000427635 SPOCD1Q6ZMY3 1216 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 SETD9Q8NE22 299 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 LCN9Q8WX39 176 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 COG8Q96MW5 612 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 PNO1Q9NRX1 252 aaKnown RBP5.74□□□□□ -1.49
HERC4-206ENST00000427635 CLN6Q9NWW5 311 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 GHRLQ9UBU3 117 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 TRPS1Q9UHF7 1281 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 VEGFDO43915 354 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 RLN1P04808 185 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 ARF5P84085 180 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 OTUD4Q01804 1114 aaKnown RBP5.74□□□□□ -1.49
HERC4-206ENST00000427635 HSF2Q03933 536 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 TOB2Q14106 344 aaPredicted RBP5.74□□□□□ -1.49
HERC4-206ENST00000427635 KLHDC7AQ5VTJ3 777 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 ALG1LQ6GMV1 187 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 BNC2Q6ZN30 1099 aaPredicted RBP5.74□□□□□ -1.49
HERC4-206ENST00000427635 IL22RA1Q8N6P7 574 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 FBXO36Q8NEA4 188 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 ADAM32Q8TC27 787 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 LMX1AQ8TE12 382 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 TRAPPC12Q8WVT3 735 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 NSL1Q96IY1 281 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 C9orf72Q96LT7 481 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 VPS35Q96QK1 796 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 CDH19Q9H159 772 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 SMURF2Q9HAU4 748 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 PIH1D1Q9NWS0 290 aaKnown RBP5.74□□□□□ -1.49
HERC4-206ENST00000427635 GMIPQ9P107 970 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 RPS6KA6Q9UK32 745 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 PTBP2Q9UKA9 531 aaKnown RBP5.74□□□□□ -1.49
HERC4-206ENST00000427635 WASF3Q9UPY6 502 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 PADI2Q9Y2J8 665 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 NDUFAF1Q9Y375 327 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 DNMT3AQ9Y6K1 912 aaPredicted RBP5.74□□□□□ -1.49
HERC4-206ENST00000427635 MAGI3Q5TCQ9 1506 aa5.74□□□□□ -1.49
HERC4-206ENST00000427635 SSU72P8A0A1W2PR75 194 aa5.73□□□□□ -1.49
HERC4-206ENST00000427635 UBE2QL1A1L167 161 aa5.73□□□□□ -1.49
HERC4-206ENST00000427635 TEX46H3BTG2 121 aa5.73□□□□□ -1.49
HERC4-206ENST00000427635 TM7SF2O76062 418 aa5.73□□□□□ -1.49
HERC4-206ENST00000427635 CSTBP04080 98 aaKnown RBP5.73□□□□□ -1.49
HERC4-206ENST00000427635 NPR3P17342 541 aa5.73□□□□□ -1.49
HERC4-206ENST00000427635 CTPS1P17812 591 aa5.73□□□□□ -1.49
HERC4-206ENST00000427635 ALDH4A1P30038 563 aa5.73□□□□□ -1.49
HERC4-206ENST00000427635 TSPAN7P41732 249 aa5.73□□□□□ -1.49
HERC4-206ENST00000427635 GNPDA1P46926 289 aa5.73□□□□□ -1.49
HERC4-206ENST00000427635 AP1S2P56377 157 aa5.73□□□□□ -1.49
HERC4-206ENST00000427635 MBTD1Q05BQ5 628 aa5.73□□□□□ -1.49
HERC4-206ENST00000427635 RASGEF1BQ0VAM2 473 aa5.73□□□□□ -1.49
HERC4-206ENST00000427635 MRPL49Q13405 166 aaKnown RBP5.73□□□□□ -1.49
HERC4-206ENST00000427635 LARS2Q15031 903 aaKnown RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms