RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 BMP4P12644 408 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 UNGP13051 313 aaPredicted RBP5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 IL1R1P14778 569 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 TPSB2P20231 275 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 CYP2A7P20853 494 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 CD247P20963 164 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 MATN1P21941 496 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 FSHRP23945 695 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 GABRB3P28472 473 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 SPRP35270 261 aaPredicted RBP5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 SLC15A1P46059 708 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 YAP1P46937 504 aaKnown RBP5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 CYP2J2P51589 502 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 ALDH3A2P51648 485 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 HSPA2P54652 639 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 PSMD4P55036 377 aaKnown RBP5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 CXCR4P61073 352 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 IGBP1P78318 339 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 CYP4F8P98187 520 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 INSM1Q01101 510 aaPredicted RBP5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 GABPAQ06546 454 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 MRPL28Q13084 256 aaKnown RBP5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 TNK1Q13470 666 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 MAMLD1Q13495 774 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 FRG1Q14331 258 aaKnown RBP5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 POLD3Q15054 466 aaPredicted RBP5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 TPSAB1Q15661 275 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 MAPK11Q15759 364 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 STK11Q15831 433 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 DDR2Q16832 855 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 FBXO43Q4G163 708 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 TOR1AIP1Q5JTV8 583 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 SNAP47Q5SQN1 464 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 GPATCH4Q5T3I0 446 aaKnown RBP5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 N4BP2L1Q5TBK1 243 aaPredicted RBP5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 TTBK2Q6IQ55 1244 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 DNAJC24Q6P3W2 148 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 DARS2Q6PI48 645 aaKnown RBP5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 CYP20A1Q6UW02 462 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 CCBE1Q6UXH8 406 aaPredicted RBP5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 DPY19L3Q6ZPD9 716 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 KCNK18Q7Z418 384 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 DSG4Q86SJ6 1040 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 CDKL3Q8IVW4 592 aaPredicted RBP5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 UBE2J2Q8N2K1 259 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 CHCHD4Q8N4Q1 142 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 MEIOBQ8N635 442 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 ARL6IP6Q8N6S5 226 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 FBXL13Q8NEE6 735 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 OR7G3Q8NG95 312 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 NPLOC4Q8TAT6 608 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 DYNC2LI1Q8TCX1 351 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 TSPEARQ8WU66 669 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 LPGAT1Q92604 370 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 FAF2Q96CS3 445 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 MYRFLQ96LU7 910 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 PWWP2AQ96N64 755 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 PELOQ9BRX2 385 aaKnown RBP5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 CENPOQ9BU64 300 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 HTATIP2Q9BUP3 242 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 TARS2Q9BW92 718 aaKnown RBP5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 C1QTNF7Q9BXJ2 289 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 IDI2Q9BXS1 227 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 LHPPQ9H008 270 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 SLC6A17Q9H1V8 727 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 SEMA6AQ9H2E6 1030 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 CLEC4MQ9H2X3 399 aaPredicted RBP5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 BRD9Q9H8M2 597 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 ERVMER34-1Q9H9K5 563 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 CAB39LQ9H9S4 337 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 LRRC4Q9HBW1 653 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 WDR6Q9NNW5 1121 aaKnown RBP5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 WASH6PQ9NQA3 447 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 PAK6Q9NQU5 681 aaPredicted RBP5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 FAM105AQ9NUU6 356 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 EIF3KQ9UBQ5 218 aaKnown RBP5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 DNMT3LQ9UJW3 386 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 AJAP1Q9UKB5 411 aaPredicted RBP5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 NIP7Q9Y221 180 aaKnown RBP eCLIP5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 TRAPPC4Q9Y296 219 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 COQ4Q9Y3A0 265 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 NAALAD2Q9Y3Q0 740 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 HCN4Q9Y3Q4 1203 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 PCDHAC2Q9Y5I4 1007 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 HEMK1Q9Y5R4 338 aaPredicted RBP5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 PTPRJQ12913 1337 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 CNTNAP2Q9UHC6 1331 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 LAMB2P55268 1798 aa5.62□□□□□ -1.51
VTI1BP4-201ENST00000427516 PRAMEF22A3QJZ6 481 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 OR6C65A6NJZ3 312 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 C2orf81A6NN90 581 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 WASH4PA8MWX3 477 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 KRBOX1C9JBD0 128 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 GOLGA8SH3BPF8 625 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 UBXN8O00124 270 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 BTN3A1O00481 513 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 SOCS2O14508 198 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 STX16O14662 325 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 MRASO14807 208 aa5.61□□□□□ -1.51
VTI1BP4-201ENST00000427516 KPNA5O15131 536 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms