RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 TTC30BQ8N4P2 665 aa13.45□□□□□ -0.26
PRPF39-202ENST00000424478 OR6P1Q8NGX9 317 aa13.45□□□□□ -0.26
PRPF39-202ENST00000424478 FBF1Q8TES7 1133 aa13.45□□□□□ -0.26
PRPF39-202ENST00000424478 HDAC10Q969S8 669 aa13.45□□□□□ -0.26
PRPF39-202ENST00000424478 PBXIP1Q96AQ6 731 aa13.45□□□□□ -0.26
PRPF39-202ENST00000424478 MSANTD3Q96H12 275 aa13.45□□□□□ -0.26
PRPF39-202ENST00000424478 ZFYVE1Q9HBF4 777 aa13.45□□□□□ -0.26
PRPF39-202ENST00000424478 CXorf51AA0A1B0GTR3 108 aa13.45□□□□□ -0.26
PRPF39-202ENST00000424478 C1SP09871 688 aa13.45□□□□□ -0.26
PRPF39-202ENST00000424478 DNAJC21Q5F1R6 531 aaKnown RBP13.45□□□□□ -0.26
PRPF39-202ENST00000424478 RALGPS1Q5JS13 557 aa13.45□□□□□ -0.26
PRPF39-202ENST00000424478 PCID2Q5JVF3 399 aa13.45□□□□□ -0.26
PRPF39-202ENST00000424478 BRAT1Q6PJG6 821 aa13.45□□□□□ -0.26
PRPF39-202ENST00000424478 USP45Q70EL2 814 aa13.45□□□□□ -0.26
PRPF39-202ENST00000424478 TRMT11Q7Z4G4 463 aaKnown RBP13.45□□□□□ -0.26
PRPF39-202ENST00000424478 TSTD1Q8NFU3 115 aa13.45□□□□□ -0.26
PRPF39-202ENST00000424478 ATXN7L3BQ96GX2 97 aa13.45□□□□□ -0.26
PRPF39-202ENST00000424478 OSBPL1AQ9BXW6 950 aa13.45□□□□□ -0.26
PRPF39-202ENST00000424478 EPHX3Q9H6B9 360 aa13.45□□□□□ -0.26
PRPF39-202ENST00000424478 FZD3Q9NPG1 666 aa13.45□□□□□ -0.26
PRPF39-202ENST00000424478 ZCWPW2A0A1B0GU75 182 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 TCRBV9S1A1TA0A576 114 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 NPY2RP49146 381 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 LIG3P49916 1009 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 TPMTP51580 245 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 NEK3P51956 506 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 DGKEP52429 567 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 HSP90AA5PQ58FG0 334 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 EMBQ6PCB8 327 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 SYT13Q7L8C5 426 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 BRSK1Q8TDC3 778 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 CAAP1Q9H8G2 361 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 CTNNAL1Q9UBT7 734 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 SOX13Q9UN79 622 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 TTC4O95801 387 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 ACADMP11310 421 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 UGT1A6P19224 532 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 UGT1A1P22309 533 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 UGT1A4P22310 534 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 ADRA1DP25100 572 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 UGT1A3P35503 534 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 UGT1A5P35504 534 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 MMP12P39900 470 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 TSTD2Q5T7W7 516 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 DENND6AQ8IWF6 608 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 GPR26Q8NDV2 337 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 PPP1R2P1Q96PQ5 205 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 C20orf96Q9NUD7 363 aaPredicted RBP13.44□□□□□ -0.26
PRPF39-202ENST00000424478 MARCH4Q9P2E8 410 aaPredicted RBP13.44□□□□□ -0.26
PRPF39-202ENST00000424478 PSAT1Q9Y617 370 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 SASH3O75995 380 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 ALADP13716 330 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 MCM3P25205 808 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 PPP2CBP62714 309 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 PPP2CAP67775 309 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 CTBP1Q13363 440 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 ACOX1Q15067 660 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 CAVIN3Q969G5 261 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 PABPC3Q9H361 631 aaKnown RBP13.44□□□□□ -0.26
PRPF39-202ENST00000424478 CA5BQ9Y2D0 317 aa13.44□□□□□ -0.26
PRPF39-202ENST00000424478 SCN8AQ9UQD0 1980 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 HEATR9A2RTY3 570 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 CCDC162PA2VCL2 907 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 TMEM221A6NGB7 291 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 IGLON5A6NGN9 336 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 MROH6A6NGR9 719 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 POC1B-GALNT4F8VUJ3 575 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 K7ESM1 405 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 M0R296 226 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 STX7O15400 261 aaKnown RBP13.43□□□□□ -0.26
PRPF39-202ENST00000424478 ERLIN1O75477 346 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 ELFN1P0C7U0 828 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 BPIP17213 487 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 PGAM1P18669 254 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 C5AR1P21730 350 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 ZNF140P52738 457 aaPredicted RBP13.43□□□□□ -0.26
PRPF39-202ENST00000424478 POLR2LP62875 67 aaKnown RBP13.43□□□□□ -0.26
PRPF39-202ENST00000424478 ARHGEF7Q14155 803 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 LONRF1Q17RB8 773 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 KBTBD12Q3ZCT8 623 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 CTAGE3PQ8IX95 158 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 OTUD6BQ8N6M0 293 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 PPP1R16AQ96I34 528 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 MCCC1Q96RQ3 725 aaPredicted RBP13.43□□□□□ -0.26
PRPF39-202ENST00000424478 KIFC1Q9BW19 673 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 CHRDQ9H2X0 955 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 TBC1D3DA0A087WVF3 549 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 TBC1D3IA0A087WXS9 549 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 TBC1D3EA0A087X179 549 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 TBC1D3KA0A087X1G2 549 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 TBC1D3FA6NER0 549 aaPredicted RBP13.43□□□□□ -0.26
PRPF39-202ENST00000424478 TBC1D3LB9A6J9 549 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 NPC1O15118 1278 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 TBC1D3HP0C7X1 549 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 GM2AP17900 193 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 SEMA3AQ14563 771 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 GRM3Q14832 879 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 SLMAPQ14BN4 828 aa13.43□□□□□ -0.26
PRPF39-202ENST00000424478 ZNF648Q5T619 568 aaPredicted RBP13.43□□□□□ -0.26
PRPF39-202ENST00000424478 FAM46CQ5VWP2 391 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms