RNA–Protein interactions for RNA: ENST00000422906.6

UBE2W-202, Transcript of ubiquitin conjugating enzyme E2 W, humanhuman

TSL 1 (best)

Gene UBE2W, Length 3,903 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2W-202ENST00000422906 TFDP1Q14186 410 aa1.82□□□□□ -2.12
UBE2W-202ENST00000422906 ELAVL3Q14576 367 aaKnown RBP1.82□□□□□ -2.12
UBE2W-202ENST00000422906 IL11RAQ14626 422 aa1.82□□□□□ -2.12
UBE2W-202ENST00000422906 RRP12Q5JTH9 1297 aaKnown RBP1.82□□□□□ -2.12
UBE2W-202ENST00000422906 CYP4A22Q5TCH4 519 aa1.82□□□□□ -2.12
UBE2W-202ENST00000422906 ZNF776Q68DI1 518 aaPredicted RBP1.82□□□□□ -2.12
UBE2W-202ENST00000422906 B4GALNT4Q76KP1 1039 aa1.82□□□□□ -2.12
UBE2W-202ENST00000422906 TMEM110Q86TL2 294 aa1.82□□□□□ -2.12
UBE2W-202ENST00000422906 HORMAD1Q86X24 394 aa1.82□□□□□ -2.12
UBE2W-202ENST00000422906 ZNF557Q8N988 423 aaPredicted RBP1.82□□□□□ -2.12
UBE2W-202ENST00000422906 FDCSPQ8NFU4 85 aa1.82□□□□□ -2.12
UBE2W-202ENST00000422906 SETD7Q8WTS6 366 aaKnown RBP1.82□□□□□ -2.12
UBE2W-202ENST00000422906 IP6K3Q96PC2 410 aa1.82□□□□□ -2.12
UBE2W-202ENST00000422906 JMJD8Q96S16 334 aa1.82□□□□□ -2.12
UBE2W-202ENST00000422906 G6PC3Q9BUM1 346 aa1.82□□□□□ -2.12
UBE2W-202ENST00000422906 TRIM54Q9BYV2 358 aa1.82□□□□□ -2.12
UBE2W-202ENST00000422906 ARHGEF4Q9NR80 690 aa1.82□□□□□ -2.12
UBE2W-202ENST00000422906 SPATS2LQ9NUQ6 558 aaKnown RBP1.82□□□□□ -2.12
UBE2W-202ENST00000422906 POLHQ9Y253 713 aa1.82□□□□□ -2.12
UBE2W-202ENST00000422906 LRRC14BA6NHZ5 514 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 LRRIQ3A6PVS8 624 aaPredicted RBP1.81□□□□□ -2.12
UBE2W-202ENST00000422906 KRTAP9-7A8MTY7 169 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 TULP2O00295 520 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 CREG1O75629 220 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 MED14OSP0DP75 135 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 PEBP1P30086 187 aaKnown RBP1.81□□□□□ -2.12
UBE2W-202ENST00000422906 L1CAMP32004 1257 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 DDIT3P35638 169 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 GFRA1P56159 465 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 ZRSR1Q15695 479 aaKnown RBP1.81□□□□□ -2.12
UBE2W-202ENST00000422906 TMEM81Q6P7N7 255 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 TMEM205Q6UW68 189 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 GDPD4Q6W3E5 623 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 CBLL1Q75N03 491 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 CILP2Q8IUL8 1156 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 LIX1LQ8IVB5 337 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 CCDC112Q8NEF3 446 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 TTC8Q8TAM2 541 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 LRRN4Q8WUT4 740 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 HMGB4Q8WW32 186 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 HAS2Q92819 552 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 DNAJA3Q96EY1 480 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 SCYL1Q96KG9 808 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 IMMP1LQ96LU5 166 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 SPAG5Q96R06 1193 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 MED15Q96RN5 788 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 CGRRF1Q99675 332 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 LGR4Q9BXB1 951 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 IMPG2Q9BZV3 1241 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 LIME1Q9H400 295 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 PCIF1Q9H4Z3 704 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 LRTM1Q9HBL6 345 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 DPP3Q9NY33 737 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 TMEM59LQ9UK28 342 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 DTX4Q9Y2E6 619 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 APC2O95996 2303 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 IGLV3-16A0A075B6K0 115 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 RBMY1BA6NDE4 496 aaKnown RBP1.81□□□□□ -2.12
UBE2W-202ENST00000422906 RBMY1EA6NEQ0 496 aaKnown RBP1.81□□□□□ -2.12
UBE2W-202ENST00000422906 A6NNZ2 444 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 SYT5O00445 386 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 CLDN4O14493 209 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 HCRTR1O43613 425 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 PPP1R3DO95685 299 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 RBMY1DP0C7P1 496 aaKnown RBP1.81□□□□□ -2.12
UBE2W-202ENST00000422906 THEGLP0DJG4 465 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 HNRNPA2B1P22626 353 aaKnown RBP1.81□□□□□ -2.12
UBE2W-202ENST00000422906 EPHB2P29323 1055 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 ALDH1A3P47895 512 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 DGKQP52824 942 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 E2F2Q14209 437 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 GRB7Q14451 532 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 NFKBIBQ15653 356 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 ARHGAP15Q53QZ3 475 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 BMP2KLQ5H9B9 411 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 RNFT1Q5M7Z0 435 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 SDHAF4Q5VUM1 108 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 SEL1L3Q68CR1 1132 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 SPECC1LQ69YQ0 1117 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 SND1Q7KZF4 910 aaKnown RBP eCLIP1.81□□□□□ -2.12
UBE2W-202ENST00000422906 RUFY3Q7L099 469 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 VASH2Q86V25 355 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 WFDC11Q8NEX6 87 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 STK32AQ8WU08 396 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 TAF4BQ92750 862 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 ARHGEF2Q92974 986 aaKnown RBP1.81□□□□□ -2.12
UBE2W-202ENST00000422906 C1orf147Q96MC9 270 aaPredicted RBP1.81□□□□□ -2.12
UBE2W-202ENST00000422906 NLRP4Q96MN2 994 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 KCTD15Q96SI1 283 aaPredicted RBP1.81□□□□□ -2.12
UBE2W-202ENST00000422906 REEP2Q9BRK0 252 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 ATXN3LQ9H3M9 355 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 SRA1Q9HD15 236 aaKnown RBP1.81□□□□□ -2.12
UBE2W-202ENST00000422906 APMAPQ9HDC9 416 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 CRCT1Q9UGL9 99 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 hCG_1642624A0A1W2PR95 340 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 TTLL8A6PVC2 850 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 PPP1R12AO14974 1030 aaPredicted RBP1.81□□□□□ -2.12
UBE2W-202ENST00000422906 PIN1P1O15428 100 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 RAD1O60671 282 aa1.81□□□□□ -2.12
UBE2W-202ENST00000422906 RTN2O75298 545 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms