RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 SIGLEC6O43699 453 aa26.42■■□□□ 1.82
CDK9-202ENST00000421939 ALPPL2P10696 532 aa26.42■■□□□ 1.82
CDK9-202ENST00000421939 ETV3P41162 512 aa26.42■■□□□ 1.82
CDK9-202ENST00000421939 ZNF211Q13398 564 aaPredicted RBP26.42■■□□□ 1.82
CDK9-202ENST00000421939 HS1BP3Q53T59 392 aa26.42■■□□□ 1.82
CDK9-202ENST00000421939 ATL2Q8NHH9 583 aa26.42■■□□□ 1.82
CDK9-202ENST00000421939 RBM15Q96T37 977 aaKnown RBP eCLIP26.42■■□□□ 1.82
CDK9-202ENST00000421939 HERPUD2Q9BSE4 406 aa26.42■■□□□ 1.82
CDK9-202ENST00000421939 TSGA10Q9BZW7 698 aa26.42■■□□□ 1.82
CDK9-202ENST00000421939 GLOD4Q9HC38 313 aa26.42■■□□□ 1.82
CDK9-202ENST00000421939 CAPN6Q9Y6Q1 641 aa26.42■■□□□ 1.82
CDK9-202ENST00000421939 MIF4GDA9UHW6 222 aaKnown RBP26.41■■□□□ 1.82
CDK9-202ENST00000421939 CACNB4O00305 520 aaPredicted RBP26.41■■□□□ 1.82
CDK9-202ENST00000421939 SCAMP1O15126 338 aa26.41■■□□□ 1.82
CDK9-202ENST00000421939 FTCDO95954 541 aa26.41■■□□□ 1.82
CDK9-202ENST00000421939 GIMD1P0DJR0 217 aa26.41■■□□□ 1.82
CDK9-202ENST00000421939 ZNF30P17039 623 aa26.41■■□□□ 1.82
CDK9-202ENST00000421939 CETN2P41208 172 aa26.41■■□□□ 1.82
CDK9-202ENST00000421939 KIAA1024LP59773 190 aa26.41■■□□□ 1.82
CDK9-202ENST00000421939 PPARDQ03181 441 aa26.41■■□□□ 1.82
CDK9-202ENST00000421939 WASHC5Q12768 1159 aa26.41■■□□□ 1.82
CDK9-202ENST00000421939 DNAJC3Q13217 504 aa26.41■■□□□ 1.82
CDK9-202ENST00000421939 SLC14A2Q15849 920 aa26.41■■□□□ 1.82
CDK9-202ENST00000421939 PROX2Q3B8N5 592 aa26.41■■□□□ 1.82
CDK9-202ENST00000421939 CCDC157Q569K6 752 aa26.41■■□□□ 1.82
CDK9-202ENST00000421939 CRTC1Q6UUV9 634 aa26.41■■□□□ 1.82
CDK9-202ENST00000421939 PELI3Q8N2H9 469 aa26.41■■□□□ 1.82
CDK9-202ENST00000421939 UBL4BQ8N7F7 174 aa26.41■■□□□ 1.82
CDK9-202ENST00000421939 TEKT5Q96M29 485 aa26.41■■□□□ 1.82
CDK9-202ENST00000421939 TBATAQ96M53 351 aa26.41■■□□□ 1.82
CDK9-202ENST00000421939 WDR92Q96MX6 357 aa26.41■■□□□ 1.82
CDK9-202ENST00000421939 ADGRE3Q9BY15 652 aa26.41■■□□□ 1.82
CDK9-202ENST00000421939 SLC13A1Q9BZW2 595 aa26.41■■□□□ 1.82
CDK9-202ENST00000421939 TCEAL2Q9H3H9 227 aaPredicted RBP26.41■■□□□ 1.82
CDK9-202ENST00000421939 WDR26Q9H7D7 661 aa26.41■■□□□ 1.82
CDK9-202ENST00000421939 NLGN3Q9NZ94 848 aa26.41■■□□□ 1.82
CDK9-202ENST00000421939 SPASTQ9UBP0 616 aa26.41■■□□□ 1.82
CDK9-202ENST00000421939 CSNK1G3Q9Y6M4 447 aa26.41■■□□□ 1.82
CDK9-202ENST00000421939 A0A0U1RQS6 177 aa26.4■■□□□ 1.82
CDK9-202ENST00000421939 K7ESM1 405 aa26.4■■□□□ 1.82
CDK9-202ENST00000421939 AQP9O43315 295 aa26.4■■□□□ 1.82
CDK9-202ENST00000421939 ACADVLP49748 655 aa26.4■■□□□ 1.82
CDK9-202ENST00000421939 NOMO1Q15155 1222 aa26.4■■□□□ 1.82
CDK9-202ENST00000421939 ALG11Q2TAA5 492 aa26.4■■□□□ 1.82
CDK9-202ENST00000421939 FAXCQ5TGI0 409 aa26.4■■□□□ 1.82
CDK9-202ENST00000421939 PNCKQ6P2M8 343 aa26.4■■□□□ 1.82
CDK9-202ENST00000421939 ENPP7Q6UWV6 458 aa26.4■■□□□ 1.82
CDK9-202ENST00000421939 Q6ZVL8 140 aa26.4■■□□□ 1.82
CDK9-202ENST00000421939 RNF10Q8N5U6 811 aaKnown RBP26.4■■□□□ 1.82
CDK9-202ENST00000421939 LMX1AQ8TE12 382 aa26.4■■□□□ 1.82
CDK9-202ENST00000421939 FUBP1Q96AE4 644 aaKnown RBP26.4■■□□□ 1.82
CDK9-202ENST00000421939 TADA1Q96BN2 335 aa26.4■■□□□ 1.82
CDK9-202ENST00000421939 LYSMD1Q96S90 227 aa26.4■■□□□ 1.82
CDK9-202ENST00000421939 LRRC61Q9BV99 259 aa26.4■■□□□ 1.82
CDK9-202ENST00000421939 DUSP23Q9BVJ7 150 aa26.4■■□□□ 1.82
CDK9-202ENST00000421939 KLK13Q9UKR3 277 aa26.4■■□□□ 1.82
CDK9-202ENST00000421939 PACSIN2Q9UNF0 486 aaPredicted RBP26.4■■□□□ 1.82
CDK9-202ENST00000421939 NEUROG3Q9Y4Z2 214 aa26.4■■□□□ 1.82
CDK9-202ENST00000421939 PCDHGA1Q9Y5H4 931 aa26.4■■□□□ 1.82
CDK9-202ENST00000421939 PYGMP11217 842 aa26.39■■□□□ 1.82
CDK9-202ENST00000421939 TSHRP16473 764 aa26.39■■□□□ 1.82
CDK9-202ENST00000421939 TRIM23P36406 574 aa26.39■■□□□ 1.82
CDK9-202ENST00000421939 BLKP51451 505 aa26.39■■□□□ 1.82
CDK9-202ENST00000421939 STC1P52823 247 aa26.39■■□□□ 1.82
CDK9-202ENST00000421939 XRCC4Q13426 336 aa26.39■■□□□ 1.82
CDK9-202ENST00000421939 QPCTQ16769 361 aa26.39■■□□□ 1.82
CDK9-202ENST00000421939 PRRT3Q5FWE3 981 aa26.39■■□□□ 1.82
CDK9-202ENST00000421939 HID1Q8IV36 788 aa26.39■■□□□ 1.82
CDK9-202ENST00000421939 HTR3CQ8WXA8 447 aa26.39■■□□□ 1.82
CDK9-202ENST00000421939 TRIB3Q96RU7 358 aa26.39■■□□□ 1.82
CDK9-202ENST00000421939 KLHL8Q9P2G9 620 aaPredicted RBP26.39■■□□□ 1.82
CDK9-202ENST00000421939 KLQ9UEF7 1012 aa26.39■■□□□ 1.82
CDK9-202ENST00000421939 FRYQ5TBA9 3013 aa26.38■■□□□ 1.81
CDK9-202ENST00000421939 H7C0C1 242 aa26.38■■□□□ 1.81
CDK9-202ENST00000421939 RFPL3O75679 317 aa26.38■■□□□ 1.81
CDK9-202ENST00000421939 RASGRP1O95267 797 aa26.38■■□□□ 1.81
CDK9-202ENST00000421939 HOXC4P09017 264 aaPredicted RBP26.38■■□□□ 1.81
CDK9-202ENST00000421939 CKMT2P17540 419 aa26.38■■□□□ 1.81
CDK9-202ENST00000421939 ATP5OP48047 213 aa26.38■■□□□ 1.81
CDK9-202ENST00000421939 HK3P52790 923 aa26.38■■□□□ 1.81
CDK9-202ENST00000421939 GALNT3Q14435 633 aa26.38■■□□□ 1.81
CDK9-202ENST00000421939 AADACL2Q6P093 401 aa26.38■■□□□ 1.81
CDK9-202ENST00000421939 TECPR1Q7Z6L1 1165 aa26.38■■□□□ 1.81
CDK9-202ENST00000421939 SPATA22Q8NHS9 363 aa26.38■■□□□ 1.81
CDK9-202ENST00000421939 ACTL9Q8TC94 416 aa26.38■■□□□ 1.81
CDK9-202ENST00000421939 TSACCQ96A04 125 aaPredicted RBP26.38■■□□□ 1.81
CDK9-202ENST00000421939 VAT1Q99536 393 aa26.38■■□□□ 1.81
CDK9-202ENST00000421939 MLPHQ9BV36 600 aaPredicted RBP26.38■■□□□ 1.81
CDK9-202ENST00000421939 LRP4O75096 1905 aa26.37■■□□□ 1.81
CDK9-202ENST00000421939 GOLGA6CA6NDK9 693 aa26.37■■□□□ 1.81
CDK9-202ENST00000421939 GOLGA6BA6NDN3 693 aa26.37■■□□□ 1.81
CDK9-202ENST00000421939 ANKRD66B4E2M5 251 aa26.37■■□□□ 1.81
CDK9-202ENST00000421939 KRT86O43790 486 aa26.37■■□□□ 1.81
CDK9-202ENST00000421939 TJP3O95049 919 aa26.37■■□□□ 1.81
CDK9-202ENST00000421939 MT-CYBP00156 380 aaPredicted RBP26.37■■□□□ 1.81
CDK9-202ENST00000421939 C1SP09871 688 aa26.37■■□□□ 1.81
CDK9-202ENST00000421939 GOLGA6DP0CG33 693 aa26.37■■□□□ 1.81
CDK9-202ENST00000421939 KELP23276 732 aa26.37■■□□□ 1.81
CDK9-202ENST00000421939 CD68P34810 354 aaPredicted RBP26.37■■□□□ 1.81
CDK9-202ENST00000421939 SRP54P61011 504 aaKnown RBP26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms