RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 TNNT1P13805 278 aa16.48■□□□□ 0.23
LINC00404-201ENST00000418660 CA4P22748 312 aa16.48■□□□□ 0.23
LINC00404-201ENST00000418660 CYLC1P35663 651 aaPredicted RBP16.48■□□□□ 0.23
LINC00404-201ENST00000418660 ETV3P41162 512 aa16.48■□□□□ 0.23
LINC00404-201ENST00000418660 IFI35P80217 286 aaPredicted RBP16.48■□□□□ 0.23
LINC00404-201ENST00000418660 NIPAL4Q0D2K0 466 aa16.48■□□□□ 0.23
LINC00404-201ENST00000418660 PTPRRQ15256 657 aa16.48■□□□□ 0.23
LINC00404-201ENST00000418660 SPA17Q15506 151 aa16.48■□□□□ 0.23
LINC00404-201ENST00000418660 CDKN3Q16667 212 aa16.48■□□□□ 0.23
LINC00404-201ENST00000418660 DENND2CQ68D51 928 aa16.48■□□□□ 0.23
LINC00404-201ENST00000418660 NYAP1Q6ZVC0 841 aa16.48■□□□□ 0.23
LINC00404-201ENST00000418660 TSPAN33Q86UF1 283 aa16.48■□□□□ 0.23
LINC00404-201ENST00000418660 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.48■□□□□ 0.23
LINC00404-201ENST00000418660 SCG3Q8WXD2 468 aaKnown RBP16.48■□□□□ 0.23
LINC00404-201ENST00000418660 OR1E3Q8WZA6 343 aa16.48■□□□□ 0.23
LINC00404-201ENST00000418660 PANX2Q96RD6 677 aa16.48■□□□□ 0.23
LINC00404-201ENST00000418660 TDRD1Q9BXT4 1180 aaKnown RBP16.48■□□□□ 0.23
LINC00404-201ENST00000418660 WDR26Q9H7D7 661 aa16.48■□□□□ 0.23
LINC00404-201ENST00000418660 LUC7LQ9NQ29 371 aaKnown RBP16.48■□□□□ 0.23
LINC00404-201ENST00000418660 DOLKQ9UPQ8 538 aa16.48■□□□□ 0.23
LINC00404-201ENST00000418660 ALG6Q9Y672 507 aa16.48■□□□□ 0.23
LINC00404-201ENST00000418660 CACNA1BQ00975 2339 aa16.47■□□□□ 0.23
LINC00404-201ENST00000418660 A0A0A6YYK5 440 aaPredicted RBP16.47■□□□□ 0.23
LINC00404-201ENST00000418660 A0A0J9YYE9 177 aa16.47■□□□□ 0.23
LINC00404-201ENST00000418660 CPED1A4D0V7 1026 aa16.47■□□□□ 0.23
LINC00404-201ENST00000418660 PSTPIP1O43586 416 aa16.47■□□□□ 0.23
LINC00404-201ENST00000418660 TRBC1P01850 177 aa16.47■□□□□ 0.23
LINC00404-201ENST00000418660 CELA2BP08218 269 aaPredicted RBP16.47■□□□□ 0.23
LINC00404-201ENST00000418660 EPHB1P54762 984 aa16.47■□□□□ 0.23
LINC00404-201ENST00000418660 RPL26P61254 145 aaKnown RBP16.47■□□□□ 0.23
LINC00404-201ENST00000418660 PDK1Q15118 436 aa16.47■□□□□ 0.23
LINC00404-201ENST00000418660 CDCP2Q5VXM1 449 aa16.47■□□□□ 0.23
LINC00404-201ENST00000418660 GUSBP11Q6P575 273 aa16.47■□□□□ 0.23
LINC00404-201ENST00000418660 CRTC1Q6UUV9 634 aa16.47■□□□□ 0.23
LINC00404-201ENST00000418660 MFSD7Q6UXD7 560 aa16.47■□□□□ 0.23
LINC00404-201ENST00000418660 Q6ZVL8 140 aa16.47■□□□□ 0.23
LINC00404-201ENST00000418660 EFL1Q7Z2Z2 1120 aaKnown RBP16.47■□□□□ 0.23
LINC00404-201ENST00000418660 TECPR1Q7Z6L1 1165 aa16.47■□□□□ 0.23
LINC00404-201ENST00000418660 GKN2Q86XP6 184 aa16.47■□□□□ 0.23
LINC00404-201ENST00000418660 RFX6Q8HWS3 928 aa16.47■□□□□ 0.23
LINC00404-201ENST00000418660 SLC35F3Q8IY50 421 aa16.47■□□□□ 0.23
LINC00404-201ENST00000418660 PELI3Q8N2H9 469 aa16.47■□□□□ 0.23
LINC00404-201ENST00000418660 PDXPQ96GD0 296 aa16.47■□□□□ 0.23
LINC00404-201ENST00000418660 OLFM3Q96PB7 478 aa16.47■□□□□ 0.23
LINC00404-201ENST00000418660 RBM15Q96T37 977 aaKnown RBP eCLIP16.47■□□□□ 0.23
LINC00404-201ENST00000418660 LGR4Q9BXB1 951 aa16.47■□□□□ 0.23
LINC00404-201ENST00000418660 TEX101Q9BY14 249 aa16.47■□□□□ 0.23
LINC00404-201ENST00000418660 NRSN2Q9GZP1 204 aa16.47■□□□□ 0.23
LINC00404-201ENST00000418660 BRD8Q9H0E9 1235 aa16.47■□□□□ 0.23
LINC00404-201ENST00000418660 ABCG4Q9H172 646 aa16.47■□□□□ 0.23
LINC00404-201ENST00000418660 FGF22Q9HCT0 170 aa16.47■□□□□ 0.23
LINC00404-201ENST00000418660 DNPEPQ9ULA0 475 aa16.47■□□□□ 0.23
LINC00404-201ENST00000418660 RPL26L1Q9UNX3 145 aaKnown RBP16.47■□□□□ 0.23
LINC00404-201ENST00000418660 CHKBQ9Y259 395 aa16.47■□□□□ 0.23
LINC00404-201ENST00000418660 PPP1R12AO14974 1030 aaPredicted RBP16.46■□□□□ 0.23
LINC00404-201ENST00000418660 PRLP01236 227 aa16.46■□□□□ 0.23
LINC00404-201ENST00000418660 MYCLP1P12525 358 aaPredicted RBP16.46■□□□□ 0.23
LINC00404-201ENST00000418660 ZNF30P17039 623 aa16.46■□□□□ 0.23
LINC00404-201ENST00000418660 FECHP22830 423 aa16.46■□□□□ 0.23
LINC00404-201ENST00000418660 TEAD1P28347 426 aa16.46■□□□□ 0.23
LINC00404-201ENST00000418660 CDKN2BP42772 138 aa16.46■□□□□ 0.23
LINC00404-201ENST00000418660 DPTQ07507 201 aa16.46■□□□□ 0.23
LINC00404-201ENST00000418660 AP1B1Q10567 949 aa16.46■□□□□ 0.23
LINC00404-201ENST00000418660 ZBTB17Q13105 803 aa16.46■□□□□ 0.23
LINC00404-201ENST00000418660 TFDP2Q14188 446 aa16.46■□□□□ 0.23
LINC00404-201ENST00000418660 RTP5Q14D33 572 aa16.46■□□□□ 0.23
LINC00404-201ENST00000418660 TAZQ16635 292 aa16.46■□□□□ 0.23
LINC00404-201ENST00000418660 LRRC66Q68CR7 880 aa16.46■□□□□ 0.23
LINC00404-201ENST00000418660 KCTD16Q68DU8 428 aa16.46■□□□□ 0.23
LINC00404-201ENST00000418660 NPNTQ6UXI9 565 aa16.46■□□□□ 0.23
LINC00404-201ENST00000418660 TMTC1Q8IUR5 882 aa16.46■□□□□ 0.23
LINC00404-201ENST00000418660 CNTD1Q8N815 330 aa16.46■□□□□ 0.23
LINC00404-201ENST00000418660 MAPK15Q8TD08 544 aa16.46■□□□□ 0.23
LINC00404-201ENST00000418660 NAT6Q93015 286 aa16.46■□□□□ 0.23
LINC00404-201ENST00000418660 NXPE2Q96DL1 559 aa16.46■□□□□ 0.23
LINC00404-201ENST00000418660 SMIM14Q96QK8 99 aa16.46■□□□□ 0.23
LINC00404-201ENST00000418660 PCDH9Q9HC56 1237 aa16.46■□□□□ 0.23
LINC00404-201ENST00000418660 MRPL40Q9NQ50 206 aaKnown RBP16.46■□□□□ 0.23
LINC00404-201ENST00000418660 PHPT1Q9NRX4 125 aaPredicted RBP16.46■□□□□ 0.23
LINC00404-201ENST00000418660 PADI4Q9UM07 663 aa16.46■□□□□ 0.23
LINC00404-201ENST00000418660 EPN1Q9Y6I3 576 aaPredicted RBP16.46■□□□□ 0.23
LINC00404-201ENST00000418660 ASPMQ8IZT6 3477 aa16.46■□□□□ 0.23
LINC00404-201ENST00000418660 CAPN8A6NHC0 703 aa16.45■□□□□ 0.22
LINC00404-201ENST00000418660 MMP2P08253 660 aa16.45■□□□□ 0.22
LINC00404-201ENST00000418660 CD86P42081 329 aa16.45■□□□□ 0.22
LINC00404-201ENST00000418660 NR2C2P49116 596 aa16.45■□□□□ 0.22
LINC00404-201ENST00000418660 DYNLT1P63172 113 aa16.45■□□□□ 0.22
LINC00404-201ENST00000418660 SKOR1P84550 965 aa16.45■□□□□ 0.22
LINC00404-201ENST00000418660 PTSQ03393 145 aa16.45■□□□□ 0.22
LINC00404-201ENST00000418660 C11orf63Q6NUN7 778 aa16.45■□□□□ 0.22
LINC00404-201ENST00000418660 SPOCD1Q6ZMY3 1216 aa16.45■□□□□ 0.22
LINC00404-201ENST00000418660 BZW1Q7L1Q6 419 aaKnown RBP16.45■□□□□ 0.22
LINC00404-201ENST00000418660 NLRP8Q86W28 1048 aa16.45■□□□□ 0.22
LINC00404-201ENST00000418660 HEATR4Q86WZ0 1026 aa16.45■□□□□ 0.22
LINC00404-201ENST00000418660 GAS2L3Q86XJ1 694 aa16.45■□□□□ 0.22
LINC00404-201ENST00000418660 RAVER1Q8IY67 606 aaKnown RBP16.45■□□□□ 0.22
LINC00404-201ENST00000418660 ARL10Q8N8L6 244 aa16.45■□□□□ 0.22
LINC00404-201ENST00000418660 DEPDC7Q96QD5 511 aa16.45■□□□□ 0.22
LINC00404-201ENST00000418660 ABCG8Q9H221 673 aa16.45■□□□□ 0.22
LINC00404-201ENST00000418660 CYP4F12Q9HCS2 524 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms