RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 VEPH1Q14D04 833 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 NAB2Q15742 525 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 ZNF77Q15935 545 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 KCNT1Q5JUK3 1230 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 IL23RQ5VWK5 629 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 KAZNQ674X7 775 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 CEP85Q6P2H3 762 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 CCBE1Q6UXH8 406 aaPredicted RBP5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 CCDC121Q6ZUS5 278 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 BEND5Q7L4P6 421 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 GDF7Q7Z4P5 450 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 PHLDB2Q86SQ0 1253 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 SGMS1Q86VZ5 419 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 CXorf67Q86X51 503 aaPredicted RBP5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 NDUFAF2Q8N183 169 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 BEST2Q8NFU1 509 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 DQX1Q8TE96 717 aaKnown RBP5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 DYDC1Q8WWB3 177 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 MRGPRX1Q96LB2 322 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 UROC1Q96N76 676 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 CATSPER2Q96P56 530 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 NDNQ99608 321 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 NUP58Q9BVL2 599 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 RNF32Q9H0A6 362 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 PCED1AQ9H1Q7 454 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 SLC6A17Q9H1V8 727 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 RNF41Q9H4P4 317 aaPredicted RBP5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 PSTPIP2Q9H939 334 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 PREBQ9HCU5 417 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 TM9SF3Q9HD45 589 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 USP36Q9P275 1121 aaKnown RBP5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 NUDT5Q9UKK9 219 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 C2CD2Q9Y426 696 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 SLCO1B1Q9Y6L6 691 aa5.62□□□□□ -1.51
ECHDC1-206ENST00000417628 A0A1W2PNU3 283 aaPredicted RBP5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 USP27XA6NNY8 438 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 BECN2A8MW95 431 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 AKR1B10O60218 316 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 VNN2O95498 520 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 STAMBPO95630 424 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 FGFR1OPO95684 399 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 ITGA2BP08514 1039 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 THEGLP0DJG4 465 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 RAC2P15153 192 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 CD1EP15812 388 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 FAHP16930 419 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 RXRAP19793 462 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 EPHA8P29322 1005 aaPredicted RBP5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 NTSR1P30989 418 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 WASP42768 502 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 CLCNKBP51801 687 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 HAND2P61296 217 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 MXRA7P84157 204 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 DR1Q01658 176 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 HSPA14Q0VDF9 509 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 MESP2Q0VG99 397 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 TRAP1Q12931 704 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 RESTQ13127 1097 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 MSLNQ13421 630 aaPredicted RBP5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 DPYSQ14117 519 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 ALX1Q15699 326 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 PDCD4Q53EL6 469 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 MANEAQ5SRI9 462 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 ZMYM1Q5SVZ6 1142 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 PPP4R3AQ6IN85 833 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 CXorf57Q6NSI4 855 aaKnown RBP5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 SLC27A1Q6PCB7 646 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 LVRNQ6Q4G3 990 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 CD300LGQ6UXG3 332 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 NIPA1Q7RTP0 329 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 CHD1LQ86WJ1 897 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 CILP2Q8IUL8 1156 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 TBC1D10CQ8IV04 446 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 TP53INP2Q8IXH6 220 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 CARNMT1Q8N4J0 409 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 SPERTQ8NA61 448 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 TMEM131Q92545 1883 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 JADE3Q92613 823 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 KIFAP3Q92845 792 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 GRAMD1AQ96CP6 724 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 ERLEC1Q96DZ1 483 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 PRR11Q96HE9 360 aaPredicted RBP5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 ZNF570Q96NI8 536 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 PGLYRP2Q96PD5 576 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 TUBGCP5Q96RT8 1024 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 ANO3Q9BYT9 981 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 TRIM5Q9C035 493 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 C12orf10Q9HB07 376 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 NOD2Q9HC29 1040 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 TBC1D22BQ9NU19 505 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 PCMTD2Q9NV79 361 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 PDP2Q9P2J9 529 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 TRAF3IP3Q9Y228 551 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 TIMM22Q9Y584 194 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 PCDHGB3Q9Y5G1 929 aa5.61□□□□□ -1.51
ECHDC1-206ENST00000417628 NBASA2RRP1 2371 aa5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 ZFC3H1O60293 1989 aaKnown RBP5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 C5orf60A6NFR6 353 aa5.6□□□□□ -1.51
ECHDC1-206ENST00000417628 TBX3O15119 743 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms