RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 CACNA1AO00555 2505 aa23.12■■□□□ 1.29
SMARCB1-205ENST00000417137 TRPM6Q9BX84 2022 aa23.11■■□□□ 1.29
SMARCB1-205ENST00000417137 CTAGE9A4FU28 777 aa23.11■■□□□ 1.29
SMARCB1-205ENST00000417137 POM121BA6NF01 834 aa23.11■■□□□ 1.29
SMARCB1-205ENST00000417137 PGRMC1O00264 195 aaKnown RBP23.11■■□□□ 1.29
SMARCB1-205ENST00000417137 PSMD3O43242 534 aa23.11■■□□□ 1.29
SMARCB1-205ENST00000417137 IFNB1P01574 187 aa23.11■■□□□ 1.29
SMARCB1-205ENST00000417137 HLA-DPA1P20036 260 aa23.11■■□□□ 1.29
SMARCB1-205ENST00000417137 GDF10P55107 478 aa23.11■■□□□ 1.29
SMARCB1-205ENST00000417137 YPEL5P62699 121 aa23.11■■□□□ 1.29
SMARCB1-205ENST00000417137 PTSQ03393 145 aa23.11■■□□□ 1.29
SMARCB1-205ENST00000417137 IRF4Q15306 451 aa23.11■■□□□ 1.29
SMARCB1-205ENST00000417137 CCDC89Q8N998 374 aa23.11■■□□□ 1.29
SMARCB1-205ENST00000417137 OR13H1Q8NG92 308 aa23.11■■□□□ 1.29
SMARCB1-205ENST00000417137 ACTRT1Q8TDG2 376 aa23.11■■□□□ 1.29
SMARCB1-205ENST00000417137 MBNL1Q9NR56 388 aaKnown RBP23.11■■□□□ 1.29
SMARCB1-205ENST00000417137 WDR87Q6ZQQ6 2873 aa23.11■■□□□ 1.29
SMARCB1-205ENST00000417137 ANKRD36A6QL64 1941 aa23.1■■□□□ 1.29
SMARCB1-205ENST00000417137 C1orf232A0A0U1RR37 186 aa23.1■■□□□ 1.29
SMARCB1-205ENST00000417137 ARRB1P49407 418 aaPredicted RBP23.1■■□□□ 1.29
SMARCB1-205ENST00000417137 PFN3P60673 137 aa23.1■■□□□ 1.29
SMARCB1-205ENST00000417137 SLC14A1Q13336 389 aa23.1■■□□□ 1.29
SMARCB1-205ENST00000417137 MTM1Q13496 603 aa23.1■■□□□ 1.29
SMARCB1-205ENST00000417137 PTK2BQ14289 1009 aa23.1■■□□□ 1.29
SMARCB1-205ENST00000417137 PTPRRQ15256 657 aa23.1■■□□□ 1.29
SMARCB1-205ENST00000417137 ZNF423Q2M1K9 1284 aa23.1■■□□□ 1.29
SMARCB1-205ENST00000417137 UAP1L1Q3KQV9 507 aa23.1■■□□□ 1.29
SMARCB1-205ENST00000417137 GSTA5Q7RTV2 222 aa23.1■■□□□ 1.29
SMARCB1-205ENST00000417137 HSD11B1LQ7Z5J1 315 aa23.1■■□□□ 1.29
SMARCB1-205ENST00000417137 COG1Q8WTW3 980 aa23.1■■□□□ 1.29
SMARCB1-205ENST00000417137 NUS1Q96E22 293 aa23.1■■□□□ 1.29
SMARCB1-205ENST00000417137 MS4A14Q96JA4 679 aa23.1■■□□□ 1.29
SMARCB1-205ENST00000417137 WDR24Q96S15 920 aa23.1■■□□□ 1.29
SMARCB1-205ENST00000417137 ELF4Q99607 663 aaPredicted RBP23.1■■□□□ 1.29
SMARCB1-205ENST00000417137 DCHS1Q96JQ0 3298 aa23.1■■□□□ 1.29
SMARCB1-205ENST00000417137 YKT6O15498 198 aa23.09■■□□□ 1.29
SMARCB1-205ENST00000417137 CLDN7O95471 211 aa23.09■■□□□ 1.29
SMARCB1-205ENST00000417137 FGF1P05230 155 aa23.09■■□□□ 1.29
SMARCB1-205ENST00000417137 ZNF883P0CG24 379 aa23.09■■□□□ 1.29
SMARCB1-205ENST00000417137 IGFALSP35858 605 aa23.09■■□□□ 1.29
SMARCB1-205ENST00000417137 ETV3P41162 512 aa23.09■■□□□ 1.29
SMARCB1-205ENST00000417137 STC1P52823 247 aa23.09■■□□□ 1.29
SMARCB1-205ENST00000417137 THOP1P52888 689 aa23.09■■□□□ 1.29
SMARCB1-205ENST00000417137 INPP5AQ14642 412 aa23.09■■□□□ 1.29
SMARCB1-205ENST00000417137 SUZ12Q15022 739 aaKnown RBP23.09■■□□□ 1.29
SMARCB1-205ENST00000417137 SLC1A5Q15758 541 aa23.09■■□□□ 1.29
SMARCB1-205ENST00000417137 RSPO4Q2I0M5 234 aaPredicted RBP23.09■■□□□ 1.29
SMARCB1-205ENST00000417137 PAPD7Q5XG87 772 aaKnown RBP23.09■■□□□ 1.29
SMARCB1-205ENST00000417137 C4orf22Q6V702 233 aa23.09■■□□□ 1.29
SMARCB1-205ENST00000417137 Q6ZVL8 140 aa23.09■■□□□ 1.29
SMARCB1-205ENST00000417137 NRSN1Q8IZ57 195 aa23.09■■□□□ 1.29
SMARCB1-205ENST00000417137 SLC25A41Q8N5S1 370 aa23.09■■□□□ 1.29
SMARCB1-205ENST00000417137 DTD2Q96FN9 168 aa23.09■■□□□ 1.29
SMARCB1-205ENST00000417137 SMIM14Q96QK8 99 aa23.09■■□□□ 1.29
SMARCB1-205ENST00000417137 TRABDQ9H4I3 376 aa23.09■■□□□ 1.29
SMARCB1-205ENST00000417137 ZFYVE1Q9HBF4 777 aa23.09■■□□□ 1.29
SMARCB1-205ENST00000417137 PI4KAP42356 2102 aa23.08■■□□□ 1.29
SMARCB1-205ENST00000417137 GOLGA6L10A0A0M3HER8 536 aa23.08■■□□□ 1.29
SMARCB1-205ENST00000417137 RGSL1A5PLK6 1076 aa23.08■■□□□ 1.29
SMARCB1-205ENST00000417137 GOLGA8CPA6NN73 597 aa23.08■■□□□ 1.29
SMARCB1-205ENST00000417137 SLC30A4O14863 429 aa23.08■■□□□ 1.29
SMARCB1-205ENST00000417137 PCCBP05166 539 aa23.08■■□□□ 1.29
SMARCB1-205ENST00000417137 GM2AP17900 193 aa23.08■■□□□ 1.29
SMARCB1-205ENST00000417137 FDFT1P37268 417 aa23.08■■□□□ 1.29
SMARCB1-205ENST00000417137 SIRPB2Q5JXA9 342 aa23.08■■□□□ 1.29
SMARCB1-205ENST00000417137 TECPR1Q7Z6L1 1165 aa23.08■■□□□ 1.29
SMARCB1-205ENST00000417137 SPATS2Q86XZ4 545 aaKnown RBP23.08■■□□□ 1.29
SMARCB1-205ENST00000417137 PRELID2Q8N945 189 aa23.08■■□□□ 1.29
SMARCB1-205ENST00000417137 OR2I1PQ8NGU4 316 aa23.08■■□□□ 1.29
SMARCB1-205ENST00000417137 FICDQ9BVA6 458 aa23.08■■□□□ 1.29
SMARCB1-205ENST00000417137 GPR63Q9BZJ6 419 aa23.08■■□□□ 1.29
SMARCB1-205ENST00000417137 RAD18Q9NS91 495 aa23.08■■□□□ 1.29
SMARCB1-205ENST00000417137 PKD2L2Q9NZM6 624 aa23.08■■□□□ 1.29
SMARCB1-205ENST00000417137 HACD3Q9P035 362 aa23.08■■□□□ 1.29
SMARCB1-205ENST00000417137 PAK5Q9P286 719 aa23.08■■□□□ 1.29
SMARCB1-205ENST00000417137 SAR1BQ9Y6B6 198 aa23.08■■□□□ 1.29
SMARCB1-205ENST00000417137 SPTY2D1-AS1A0A0U1RR47 76 aa23.07■■□□□ 1.28
SMARCB1-205ENST00000417137 METTL18O95568 372 aa23.07■■□□□ 1.28
SMARCB1-205ENST00000417137 AGTP01019 485 aa23.07■■□□□ 1.28
SMARCB1-205ENST00000417137 ATXN1LP0C7T5 689 aaKnown RBP23.07■■□□□ 1.28
SMARCB1-205ENST00000417137 HTR1BP28222 390 aa23.07■■□□□ 1.28
SMARCB1-205ENST00000417137 CCT8P50990 548 aa23.07■■□□□ 1.28
SMARCB1-205ENST00000417137 PDE1CQ14123 709 aaPredicted RBP23.07■■□□□ 1.28
SMARCB1-205ENST00000417137 CDKN3Q16667 212 aa23.07■■□□□ 1.28
SMARCB1-205ENST00000417137 HS1BP3Q53T59 392 aa23.07■■□□□ 1.28
SMARCB1-205ENST00000417137 ESRP1Q6NXG1 681 aaKnown RBP23.07■■□□□ 1.28
SMARCB1-205ENST00000417137 PNCKQ6P2M8 343 aa23.07■■□□□ 1.28
SMARCB1-205ENST00000417137 RANBP10Q6VN20 620 aa23.07■■□□□ 1.28
SMARCB1-205ENST00000417137 ZNF765Q7L2R6 523 aa23.07■■□□□ 1.28
SMARCB1-205ENST00000417137 NLRP8Q86W28 1048 aa23.07■■□□□ 1.28
SMARCB1-205ENST00000417137 ATL2Q8NHH9 583 aa23.07■■□□□ 1.28
SMARCB1-205ENST00000417137 MAGOHBQ96A72 148 aaKnown RBP23.07■■□□□ 1.28
SMARCB1-205ENST00000417137 TRIM44Q96DX7 344 aaPredicted RBP23.07■■□□□ 1.28
SMARCB1-205ENST00000417137 GORASP1Q9BQQ3 440 aa23.07■■□□□ 1.28
SMARCB1-205ENST00000417137 RTKNQ9BST9 563 aa23.07■■□□□ 1.28
SMARCB1-205ENST00000417137 APOOQ9BUR5 198 aa23.07■■□□□ 1.28
SMARCB1-205ENST00000417137 LRRC40Q9H9A6 602 aa23.07■■□□□ 1.28
SMARCB1-205ENST00000417137 IL21RQ9HBE5 538 aa23.07■■□□□ 1.28
SMARCB1-205ENST00000417137 GPR27Q9NS67 375 aa23.07■■□□□ 1.28
SMARCB1-205ENST00000417137 TM7SF3Q9NS93 570 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms