RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 DDX3XO00571 662 aaKnown RBP eCLIP14.83□□□□□ -0.041e-48■■■□□ 14.6
RPS28-201ENST00000417088 B4GAT1O43505 415 aa14.83□□□□□ -0.04
RPS28-201ENST00000417088 FUCA1P04066 466 aa14.83□□□□□ -0.04
RPS28-201ENST00000417088 MYCLP1P12525 358 aaPredicted RBP14.83□□□□□ -0.04
RPS28-201ENST00000417088 GZMAP12544 262 aa14.83□□□□□ -0.04
RPS28-201ENST00000417088 KRT10P13645 584 aa14.83□□□□□ -0.04
RPS28-201ENST00000417088 CR2P20023 1033 aa14.83□□□□□ -0.04
RPS28-201ENST00000417088 VIPR1P32241 457 aa14.83□□□□□ -0.04
RPS28-201ENST00000417088 ETV5P41161 510 aa14.83□□□□□ -0.04
RPS28-201ENST00000417088 SRSF6Q13247 344 aaKnown RBP14.83□□□□□ -0.04
RPS28-201ENST00000417088 ASIC2Q16515 512 aa14.83□□□□□ -0.04
RPS28-201ENST00000417088 TSR1Q2NL82 804 aaKnown RBP14.83□□□□□ -0.04
RPS28-201ENST00000417088 C17orf82Q86X59 251 aaPredicted RBP14.83□□□□□ -0.04
RPS28-201ENST00000417088 NRROSQ86YC3 692 aa14.83□□□□□ -0.04
RPS28-201ENST00000417088 PGBD5Q8N414 524 aa14.83□□□□□ -0.04
RPS28-201ENST00000417088 GPBAR1Q8TDU6 330 aa14.83□□□□□ -0.04
RPS28-201ENST00000417088 TMEM159Q96B96 161 aa14.83□□□□□ -0.04
RPS28-201ENST00000417088 NUS1Q96E22 293 aa14.83□□□□□ -0.04
RPS28-201ENST00000417088 NUDCD1Q96RS6 583 aa14.83□□□□□ -0.04
RPS28-201ENST00000417088 TEX101Q9BY14 249 aa14.83□□□□□ -0.04
RPS28-201ENST00000417088 SEMA6CQ9H3T2 930 aa14.83□□□□□ -0.04
RPS28-201ENST00000417088 CARS2Q9HA77 564 aaKnown RBP14.83□□□□□ -0.04
RPS28-201ENST00000417088 ETNK2Q9NVF9 386 aa14.83□□□□□ -0.04
RPS28-201ENST00000417088 AIPL1Q9NZN9 384 aa14.83□□□□□ -0.04
RPS28-201ENST00000417088 SCN8AQ9UQD0 1980 aa14.83□□□□□ -0.04
RPS28-201ENST00000417088 PRAMEF33A0A0G2JMD5 474 aa14.82□□□□□ -0.04
RPS28-201ENST00000417088 A0A1W2PQ67 120 aa14.82□□□□□ -0.04
RPS28-201ENST00000417088 H3BRJ5 948 aa14.82□□□□□ -0.04
RPS28-201ENST00000417088 PRAMEF10O60809 474 aa14.82□□□□□ -0.04
RPS28-201ENST00000417088 SOCS5O75159 536 aa14.82□□□□□ -0.04
RPS28-201ENST00000417088 HEXIM1O94992 359 aaKnown RBP14.82□□□□□ -0.04
RPS28-201ENST00000417088 CPP00450 1065 aa14.82□□□□□ -0.04
RPS28-201ENST00000417088 FGF1P05230 155 aa14.82□□□□□ -0.04
RPS28-201ENST00000417088 CEACAM5P06731 702 aa14.82□□□□□ -0.04
RPS28-201ENST00000417088 LIPCP11150 499 aa14.82□□□□□ -0.04
RPS28-201ENST00000417088 CCNB1P14635 433 aa14.82□□□□□ -0.04
RPS28-201ENST00000417088 AMPD1P23109 780 aa14.82□□□□□ -0.04
RPS28-201ENST00000417088 IL1R2P27930 398 aa14.82□□□□□ -0.04
RPS28-201ENST00000417088 PCK1P35558 622 aa14.82□□□□□ -0.04
RPS28-201ENST00000417088 HSPA9P38646 679 aaKnown RBP14.82□□□□□ -0.04
RPS28-201ENST00000417088 PRKCIP41743 596 aa14.82□□□□□ -0.04
RPS28-201ENST00000417088 MAZP56270 477 aaKnown RBP14.82□□□□□ -0.04
RPS28-201ENST00000417088 ZNF235Q14590 738 aa14.82□□□□□ -0.04
RPS28-201ENST00000417088 DPYSL2Q16555 572 aa14.82□□□□□ -0.04
RPS28-201ENST00000417088 DENND2CQ68D51 928 aa14.82□□□□□ -0.04
RPS28-201ENST00000417088 USP53Q70EK8 1073 aa14.82□□□□□ -0.04
RPS28-201ENST00000417088 HEATR4Q86WZ0 1026 aa14.82□□□□□ -0.04
RPS28-201ENST00000417088 EXD3Q8N9H8 876 aa14.82□□□□□ -0.04
RPS28-201ENST00000417088 KIAA1524Q8TCG1 905 aa14.82□□□□□ -0.04
RPS28-201ENST00000417088 PDCD6IPQ8WUM4 868 aaKnown RBP14.82□□□□□ -0.04
RPS28-201ENST00000417088 ZNF653Q96CK0 615 aa14.82□□□□□ -0.04
RPS28-201ENST00000417088 CMKLR1Q99788 373 aa14.82□□□□□ -0.04
RPS28-201ENST00000417088 FRMD8Q9BZ67 464 aaPredicted RBP14.82□□□□□ -0.04
RPS28-201ENST00000417088 SUDS3Q9H7L9 328 aaPredicted RBP14.82□□□□□ -0.04
RPS28-201ENST00000417088 ZWILCHQ9H900 591 aa14.82□□□□□ -0.04
RPS28-201ENST00000417088 NOD2Q9HC29 1040 aa14.82□□□□□ -0.04
RPS28-201ENST00000417088 PHPT1Q9NRX4 125 aaPredicted RBP14.82□□□□□ -0.04
RPS28-201ENST00000417088 FOXJ2Q9P0K8 574 aa14.82□□□□□ -0.04
RPS28-201ENST00000417088 SCINQ9Y6U3 715 aa14.82□□□□□ -0.04
RPS28-201ENST00000417088 MAFKO60675 156 aa14.81□□□□□ -0.04
RPS28-201ENST00000417088 TCF4P15884 667 aa14.81□□□□□ -0.04
RPS28-201ENST00000417088 LHCGRP22888 699 aa14.81□□□□□ -0.04
RPS28-201ENST00000417088 ARL4AP40617 200 aa14.81□□□□□ -0.04
RPS28-201ENST00000417088 ETV3P41162 512 aa14.81□□□□□ -0.04
RPS28-201ENST00000417088 MAPK10P53779 464 aa14.81□□□□□ -0.04
RPS28-201ENST00000417088 TYRO3Q06418 890 aa14.81□□□□□ -0.04
RPS28-201ENST00000417088 TRAF2Q12933 501 aa14.81□□□□□ -0.04
RPS28-201ENST00000417088 C16orf72Q14CZ0 275 aa14.81□□□□□ -0.04
RPS28-201ENST00000417088 PTPRRQ15256 657 aa14.81□□□□□ -0.04
RPS28-201ENST00000417088 SMTNL2Q2TAL5 461 aa14.81□□□□□ -0.04
RPS28-201ENST00000417088 LINC00303Q3SY05 128 aa14.81□□□□□ -0.04
RPS28-201ENST00000417088 PHF19Q5T6S3 580 aa14.81□□□□□ -0.04
RPS28-201ENST00000417088 TMCO3Q6UWJ1 677 aa14.81□□□□□ -0.04
RPS28-201ENST00000417088 ZNF438Q7Z4V0 828 aa14.81□□□□□ -0.04
RPS28-201ENST00000417088 HSD11B1LQ7Z5J1 315 aa14.81□□□□□ -0.04
RPS28-201ENST00000417088 POLNQ7Z5Q5 900 aa14.81□□□□□ -0.04
RPS28-201ENST00000417088 ZFAND4Q86XD8 727 aa14.81□□□□□ -0.04
RPS28-201ENST00000417088 ZDHHC1Q8WTX9 485 aa14.81□□□□□ -0.04
RPS28-201ENST00000417088 PTCD2Q8WV60 388 aaKnown RBP14.81□□□□□ -0.04
RPS28-201ENST00000417088 USP7Q93009 1102 aa14.81□□□□□ -0.04
RPS28-201ENST00000417088 SGF29Q96ES7 293 aa14.81□□□□□ -0.04
RPS28-201ENST00000417088 DTD2Q96FN9 168 aa14.81□□□□□ -0.04
RPS28-201ENST00000417088 GBP4Q96PP9 640 aa14.81□□□□□ -0.04
RPS28-201ENST00000417088 MGME1Q9BQP7 344 aa14.81□□□□□ -0.04
RPS28-201ENST00000417088 GSDMCQ9BYG8 508 aa14.81□□□□□ -0.04
RPS28-201ENST00000417088 RDH14Q9HBH5 336 aa14.81□□□□□ -0.04
RPS28-201ENST00000417088 TRNAU1APQ9NX07 287 aaKnown RBP14.81□□□□□ -0.04
RPS28-201ENST00000417088 KCTD5Q9NXV2 234 aa14.81□□□□□ -0.04
RPS28-201ENST00000417088 TAAR2Q9P1P5 351 aa14.81□□□□□ -0.04
RPS28-201ENST00000417088 MYO1AQ9UBC5 1043 aa14.81□□□□□ -0.04
RPS28-201ENST00000417088 PHTF1Q9UMS5 762 aa14.81□□□□□ -0.04
RPS28-201ENST00000417088 SPTA1P02549 2419 aa14.81□□□□□ -0.04
RPS28-201ENST00000417088 NPIPB15A6NHN6 443 aaPredicted RBP14.8□□□□□ -0.04
RPS28-201ENST00000417088 C9orf172C9J069 976 aa14.8□□□□□ -0.04
RPS28-201ENST00000417088 PYCARD-AS1I3L0S3 204 aa14.8□□□□□ -0.04
RPS28-201ENST00000417088 CPNE6O95741 557 aa14.8□□□□□ -0.04
RPS28-201ENST00000417088 CYP2A6P11509 494 aaPredicted RBP14.8□□□□□ -0.04
RPS28-201ENST00000417088 AK4P27144 223 aaPredicted RBP14.8□□□□□ -0.04
RPS28-201ENST00000417088 GNPDA1P46926 289 aa14.8□□□□□ -0.04
RPS28-201ENST00000417088 OR1D5P58170 312 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms