RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 HELZ2Q9BYK8 2649 aaKnown RBP14.45□□□□□ -0.1
PAF1-202ENST00000416728 TTC24A2A3L6 582 aaPredicted RBP14.45□□□□□ -0.1
PAF1-202ENST00000416728 DDX3XO00571 662 aaKnown RBP eCLIP14.45□□□□□ -0.11e-7■■■■■ 37.2
PAF1-202ENST00000416728 HTRA2O43464 458 aaPredicted RBP14.45□□□□□ -0.1
PAF1-202ENST00000416728 NUDT21O43809 227 aaKnown RBP14.45□□□□□ -0.1
PAF1-202ENST00000416728 CPP00450 1065 aa14.45□□□□□ -0.1
PAF1-202ENST00000416728 MYBL1P10243 752 aa14.45□□□□□ -0.1
PAF1-202ENST00000416728 VIPR1P32241 457 aa14.45□□□□□ -0.1
PAF1-202ENST00000416728 PRKCIP41743 596 aa14.45□□□□□ -0.1
PAF1-202ENST00000416728 ZFP36L1Q07352 338 aaKnown RBP14.45□□□□□ -0.1
PAF1-202ENST00000416728 CNGA3Q16281 694 aa14.45□□□□□ -0.1
PAF1-202ENST00000416728 DPYSL2Q16555 572 aa14.45□□□□□ -0.1
PAF1-202ENST00000416728 SMTNL2Q2TAL5 461 aa14.45□□□□□ -0.1
PAF1-202ENST00000416728 ANO6Q4KMQ2 910 aa14.45□□□□□ -0.1
PAF1-202ENST00000416728 E4F1Q66K89 784 aaPredicted RBP14.45□□□□□ -0.1
PAF1-202ENST00000416728 DENND2CQ68D51 928 aa14.45□□□□□ -0.1
PAF1-202ENST00000416728 HEATR4Q86WZ0 1026 aa14.45□□□□□ -0.1
PAF1-202ENST00000416728 NSMCE1Q8WV22 266 aa14.45□□□□□ -0.1
PAF1-202ENST00000416728 NUDCD1Q96RS6 583 aa14.45□□□□□ -0.1
PAF1-202ENST00000416728 CMKLR1Q99788 373 aa14.45□□□□□ -0.1
PAF1-202ENST00000416728 SUDS3Q9H7L9 328 aaPredicted RBP14.45□□□□□ -0.1
PAF1-202ENST00000416728 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.45□□□□□ -0.1
PAF1-202ENST00000416728 A0A1W2PQC6 194 aa14.44□□□□□ -0.1
PAF1-202ENST00000416728 SMTNL1A8MU46 457 aa14.44□□□□□ -0.1
PAF1-202ENST00000416728 J3QKU1 62 aa14.44□□□□□ -0.1
PAF1-202ENST00000416728 AGRPO00253 132 aa14.44□□□□□ -0.1
PAF1-202ENST00000416728 NVLO15381 856 aaKnown RBP14.44□□□□□ -0.1
PAF1-202ENST00000416728 HEXIM1O94992 359 aaKnown RBP14.44□□□□□ -0.1
PAF1-202ENST00000416728 CYP2A6P11509 494 aaPredicted RBP14.44□□□□□ -0.1
PAF1-202ENST00000416728 CCNB1P14635 433 aa14.44□□□□□ -0.1
PAF1-202ENST00000416728 ITIH1P19827 911 aa14.44□□□□□ -0.1
PAF1-202ENST00000416728 CR2P20023 1033 aa14.44□□□□□ -0.1
PAF1-202ENST00000416728 AMPD1P23109 780 aa14.44□□□□□ -0.1
PAF1-202ENST00000416728 IL1R2P27930 398 aa14.44□□□□□ -0.1
PAF1-202ENST00000416728 ILF3Q12906 894 aaKnown RBP eCLIP14.44□□□□□ -0.1
PAF1-202ENST00000416728 TGIF1Q15583 401 aa14.44□□□□□ -0.1
PAF1-202ENST00000416728 MAP9Q49MG5 647 aa14.44□□□□□ -0.1
PAF1-202ENST00000416728 BOLA3Q53S33 107 aa14.44□□□□□ -0.1
PAF1-202ENST00000416728 PHF19Q5T6S3 580 aa14.44□□□□□ -0.1
PAF1-202ENST00000416728 POLNQ7Z5Q5 900 aa14.44□□□□□ -0.1
PAF1-202ENST00000416728 ATPAF2Q8N5M1 289 aa14.44□□□□□ -0.1
PAF1-202ENST00000416728 HSPH1Q92598 858 aa14.44□□□□□ -0.1
PAF1-202ENST00000416728 MED8Q96G25 268 aa14.44□□□□□ -0.1
PAF1-202ENST00000416728 CSPG4P5Q96PW8 444 aa14.44□□□□□ -0.1
PAF1-202ENST00000416728 MGME1Q9BQP7 344 aa14.44□□□□□ -0.1
PAF1-202ENST00000416728 BPIFA3Q9BQP9 254 aa14.44□□□□□ -0.1
PAF1-202ENST00000416728 TEX101Q9BY14 249 aa14.44□□□□□ -0.1
PAF1-202ENST00000416728 GSDMCQ9BYG8 508 aa14.44□□□□□ -0.1
PAF1-202ENST00000416728 NOD2Q9HC29 1040 aa14.44□□□□□ -0.1
PAF1-202ENST00000416728 ETNK2Q9NVF9 386 aa14.44□□□□□ -0.1
PAF1-202ENST00000416728 PHTF1Q9UMS5 762 aa14.44□□□□□ -0.1
PAF1-202ENST00000416728 ZNF462Q96JM2 2506 aa14.44□□□□□ -0.1
PAF1-202ENST00000416728 GOLGA6CA6NDK9 693 aa14.43□□□□□ -0.1
PAF1-202ENST00000416728 GOLGA6BA6NDN3 693 aa14.43□□□□□ -0.1
PAF1-202ENST00000416728 MAFKO60675 156 aa14.43□□□□□ -0.1
PAF1-202ENST00000416728 PEX11BO96011 259 aa14.43□□□□□ -0.1
PAF1-202ENST00000416728 GOLGA6DP0CG33 693 aa14.43□□□□□ -0.1
PAF1-202ENST00000416728 LIPCP11150 499 aa14.43□□□□□ -0.1
PAF1-202ENST00000416728 SERPINB6P35237 376 aa14.43□□□□□ -0.1
PAF1-202ENST00000416728 ETV3P41162 512 aa14.43□□□□□ -0.1
PAF1-202ENST00000416728 MAZP56270 477 aaKnown RBP14.43□□□□□ -0.1
PAF1-202ENST00000416728 TRAF2Q12933 501 aa14.43□□□□□ -0.1
PAF1-202ENST00000416728 RALGPS1Q5JS13 557 aa14.43□□□□□ -0.1
PAF1-202ENST00000416728 SLITRK4Q8IW52 837 aa14.43□□□□□ -0.1
PAF1-202ENST00000416728 PGBD5Q8N414 524 aa14.43□□□□□ -0.1
PAF1-202ENST00000416728 GPBAR1Q8TDU6 330 aa14.43□□□□□ -0.1
PAF1-202ENST00000416728 ZDHHC1Q8WTX9 485 aa14.43□□□□□ -0.1
PAF1-202ENST00000416728 DTD2Q96FN9 168 aa14.43□□□□□ -0.1
PAF1-202ENST00000416728 SPATS2LQ9NUQ6 558 aaKnown RBP14.43□□□□□ -0.1
PAF1-202ENST00000416728 TRNAU1APQ9NX07 287 aaKnown RBP14.43□□□□□ -0.1
PAF1-202ENST00000416728 GOLGA6AQ9NYA3 693 aa14.43□□□□□ -0.1
PAF1-202ENST00000416728 SEPT10Q9P0V9 454 aa14.43□□□□□ -0.1
PAF1-202ENST00000416728 LRP4O75096 1905 aa14.43□□□□□ -0.1
PAF1-202ENST00000416728 KIF26BQ2KJY2 2108 aa14.43□□□□□ -0.1
PAF1-202ENST00000416728 LRRK1Q38SD2 2015 aa14.42□□□□□ -0.1
PAF1-202ENST00000416728 PRAMEF33A0A0G2JMD5 474 aa14.42□□□□□ -0.1
PAF1-202ENST00000416728 RHPN2P1A8MT19 583 aa14.42□□□□□ -0.1
PAF1-202ENST00000416728 B8ZZF3 427 aa14.42□□□□□ -0.1
PAF1-202ENST00000416728 PSMD11O00231 422 aa14.42□□□□□ -0.1
PAF1-202ENST00000416728 ZW10O43264 779 aa14.42□□□□□ -0.1
PAF1-202ENST00000416728 EFSO43281 561 aa14.42□□□□□ -0.1
PAF1-202ENST00000416728 PRAMEF10O60809 474 aa14.42□□□□□ -0.1
PAF1-202ENST00000416728 CPNE6O95741 557 aa14.42□□□□□ -0.1
PAF1-202ENST00000416728 CEACAM5P06731 702 aa14.42□□□□□ -0.1
PAF1-202ENST00000416728 RARAP10276 462 aa14.42□□□□□ -0.1
PAF1-202ENST00000416728 SKILP12757 684 aa14.42□□□□□ -0.1
PAF1-202ENST00000416728 TCF4P15884 667 aa14.42□□□□□ -0.1
PAF1-202ENST00000416728 LHCGRP22888 699 aa14.42□□□□□ -0.1
PAF1-202ENST00000416728 MMP13P45452 471 aa14.42□□□□□ -0.1
PAF1-202ENST00000416728 GNPDA1P46926 289 aa14.42□□□□□ -0.1
PAF1-202ENST00000416728 CDH6P55285 790 aa14.42□□□□□ -0.1
PAF1-202ENST00000416728 MAXP61244 160 aa14.42□□□□□ -0.1
PAF1-202ENST00000416728 CDK3Q00526 305 aa14.42□□□□□ -0.1
PAF1-202ENST00000416728 B4GALNT1Q00973 533 aa14.42□□□□□ -0.1
PAF1-202ENST00000416728 BIRC2Q13490 618 aa14.42□□□□□ -0.1
PAF1-202ENST00000416728 PIGHQ14442 188 aaPredicted RBP14.42□□□□□ -0.1
PAF1-202ENST00000416728 AMZ1Q400G9 498 aa14.42□□□□□ -0.1
PAF1-202ENST00000416728 ARMC12Q5T9G4 340 aa14.42□□□□□ -0.1
PAF1-202ENST00000416728 MARC1Q5VT66 337 aa14.42□□□□□ -0.1
PAF1-202ENST00000416728 RAET1GQ6H3X3 334 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms