RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 ESRP1Q6NXG1 681 aaKnown RBP8.41□□□□□ -1.06
RBM39-208ENST00000416108 AFTPHQ6ULP2 937 aa8.41□□□□□ -1.06
RBM39-208ENST00000416108 CRTC1Q6UUV9 634 aa8.41□□□□□ -1.06
RBM39-208ENST00000416108 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.41□□□□□ -1.06
RBM39-208ENST00000416108 TRIM67Q6ZTA4 783 aa8.41□□□□□ -1.06
RBM39-208ENST00000416108 TAOK1Q7L7X3 1001 aa8.41□□□□□ -1.06
RBM39-208ENST00000416108 TMEM135Q86UB9 458 aa8.41□□□□□ -1.06
RBM39-208ENST00000416108 KCNMB4Q86W47 210 aa8.41□□□□□ -1.06
RBM39-208ENST00000416108 IGDCC3Q8IVU1 814 aa8.41□□□□□ -1.06
RBM39-208ENST00000416108 AGGF1Q8N302 714 aaeCLIP8.41□□□□□ -1.064e-21■□□□□ 8
RBM39-208ENST00000416108 PPM1NQ8N819 430 aa8.41□□□□□ -1.06
RBM39-208ENST00000416108 MDGA1Q8NFP4 955 aa8.41□□□□□ -1.06
RBM39-208ENST00000416108 OR4K2Q8NGD2 314 aa8.41□□□□□ -1.06
RBM39-208ENST00000416108 OR6P1Q8NGX9 317 aa8.41□□□□□ -1.06
RBM39-208ENST00000416108 FBF1Q8TES7 1133 aa8.41□□□□□ -1.06
RBM39-208ENST00000416108 HMGB4Q8WW32 186 aa8.41□□□□□ -1.06
RBM39-208ENST00000416108 CERS2Q96G23 380 aa8.41□□□□□ -1.06
RBM39-208ENST00000416108 DNAJC1Q96KC8 554 aaKnown RBP8.41□□□□□ -1.06
RBM39-208ENST00000416108 LYSMD1Q96S90 227 aa8.41□□□□□ -1.06
RBM39-208ENST00000416108 CYTH2Q99418 400 aa8.41□□□□□ -1.06
RBM39-208ENST00000416108 WDR83Q9BRX9 315 aaKnown RBP8.41□□□□□ -1.06
RBM39-208ENST00000416108 FAM167BQ9BTA0 163 aa8.41□□□□□ -1.06
RBM39-208ENST00000416108 CHRDQ9H2X0 955 aa8.41□□□□□ -1.06
RBM39-208ENST00000416108 PPCSQ9HAB8 311 aa8.41□□□□□ -1.06
RBM39-208ENST00000416108 NLE1Q9NVX2 485 aaPredicted RBP8.41□□□□□ -1.06
RBM39-208ENST00000416108 FBXL12Q9NXK8 326 aa8.41□□□□□ -1.06
RBM39-208ENST00000416108 NSMCE4AQ9NXX6 385 aa8.41□□□□□ -1.06
RBM39-208ENST00000416108 ZFATQ9P243 1243 aa8.41□□□□□ -1.06
RBM39-208ENST00000416108 SIT1Q9Y3P8 196 aa8.41□□□□□ -1.06
RBM39-208ENST00000416108 MTF2Q9Y483 593 aaPredicted RBP8.41□□□□□ -1.06
RBM39-208ENST00000416108 SLC30A1Q9Y6M5 507 aa8.41□□□□□ -1.06
RBM39-208ENST00000416108 REV3LO60673 3130 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 A0A1W2PQF6 199 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 TCRBV9S1A1TA0A576 114 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 MROH6A6NGR9 719 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 SMIM23A6NLE4 172 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 POC1B-GALNT4F8VUJ3 575 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 H0Y858 1186 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 PLK4O00444 970 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 AURKAO14965 403 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 ATP8B1O43520 1251 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 TSPAN6O43657 245 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 TM7SF2O76062 418 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 PCDH8O95206 1070 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 VAPBO95292 243 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 APBB3O95704 486 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 INHBAP08476 426 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 NUDT17P0C025 328 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 CHRM1P11229 460 aaPredicted RBP8.4□□□□□ -1.06
RBM39-208ENST00000416108 GABRG2P18507 467 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 NDUFV2P19404 249 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 ITGALP20701 1170 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 MC4RP32245 332 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 HMGCLP35914 325 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 MMP12P39900 470 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 P2RY2P41231 377 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 MSH2P43246 934 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 RPS9P46781 194 aaKnown RBP8.4□□□□□ -1.06
RBM39-208ENST00000416108 ZNF140P52738 457 aaPredicted RBP8.4□□□□□ -1.06
RBM39-208ENST00000416108 GPX6P59796 221 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 SEMG2Q02383 582 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 MSLNQ13421 630 aaPredicted RBP8.4□□□□□ -1.06
RBM39-208ENST00000416108 FRG1Q14331 258 aaKnown RBP8.4□□□□□ -1.06
RBM39-208ENST00000416108 ACOX1Q15067 660 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 UAP1Q16222 522 aaPredicted RBP8.4□□□□□ -1.06
RBM39-208ENST00000416108 CNGA3Q16281 694 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 ZNF284Q2VY69 593 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 TMEM52BQ4KMG9 183 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 FASTKD1Q53R41 847 aaKnown RBP8.4□□□□□ -1.06
RBM39-208ENST00000416108 CEP85LQ5SZL2 805 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 ZNF449Q6P9G9 518 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 LRIG3Q6UXM1 1119 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 TMEM92Q6UXU6 159 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 USP30Q70CQ3 517 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 TSPAN33Q86UF1 283 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 LMNTD2Q8IXW0 634 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 CNPY4Q8N129 248 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 SPEM1Q8N4L4 309 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 TTC30BQ8N4P2 665 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 AADATQ8N5Z0 425 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 OR13C4Q8NGS5 318 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 OR14C36Q8NHC7 312 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 EDAQ92838 391 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 MRGPRX1Q96LB2 322 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 FCRL3Q96P31 734 aaPredicted RBP8.4□□□□□ -1.06
RBM39-208ENST00000416108 SMIM14Q96QK8 99 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 TTC1Q99614 292 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 C19orf43Q9BQ61 176 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 TRIM56Q9BRZ2 755 aaKnown RBP8.4□□□□□ -1.06
RBM39-208ENST00000416108 WRAP53Q9BUR4 548 aaKnown RBP8.4□□□□□ -1.06
RBM39-208ENST00000416108 MKRN2Q9H000 416 aaKnown RBP8.4□□□□□ -1.06
RBM39-208ENST00000416108 ACSS3Q9H6R3 686 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 VIPAS39Q9H9C1 493 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 BPIFA1Q9NP55 256 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 CD320Q9NPF0 282 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 IARS2Q9NSE4 1012 aaKnown RBP8.4□□□□□ -1.06
RBM39-208ENST00000416108 TREX1Q9NSU2 369 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 CATSPERZQ9NTU4 200 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 IL17CQ9P0M4 197 aa8.4□□□□□ -1.06
RBM39-208ENST00000416108 SLC2A6Q9UGQ3 507 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms