RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 RCOR1Q9UKL0 485 aa15.77■□□□□ 0.12
CPNE1-208ENST00000414711 PCDHGB7Q9Y5F8 929 aa15.77■□□□□ 0.12
CPNE1-208ENST00000414711 PCSK5Q92824 1860 aa15.77■□□□□ 0.11
CPNE1-208ENST00000414711 POLEQ07864 2286 aa15.77■□□□□ 0.11
CPNE1-208ENST00000414711 ACTN4O43707 911 aaKnown RBP15.76■□□□□ 0.11
CPNE1-208ENST00000414711 SRGAP2O75044 1071 aa15.76■□□□□ 0.11
CPNE1-208ENST00000414711 DAB1O75553 588 aa15.76■□□□□ 0.11
CPNE1-208ENST00000414711 ETFBP38117 255 aa15.76■□□□□ 0.11
CPNE1-208ENST00000414711 MMP12P39900 470 aa15.76■□□□□ 0.11
CPNE1-208ENST00000414711 CXCR3P49682 368 aa15.76■□□□□ 0.11
CPNE1-208ENST00000414711 PER3P56645 1201 aa15.76■□□□□ 0.11
CPNE1-208ENST00000414711 ZRSR2Q15696 482 aaKnown RBP15.76■□□□□ 0.11
CPNE1-208ENST00000414711 ARTNQ5T4W7 220 aa15.76■□□□□ 0.11
CPNE1-208ENST00000414711 ERAP2Q6P179 960 aa15.76■□□□□ 0.11
CPNE1-208ENST00000414711 LEKR1Q6ZMV7 388 aa15.76■□□□□ 0.11
CPNE1-208ENST00000414711 GUF1Q8N442 669 aaKnown RBP15.76■□□□□ 0.11
CPNE1-208ENST00000414711 THAP4Q8WY91 577 aa15.76■□□□□ 0.11
CPNE1-208ENST00000414711 C1orf74Q96LT6 269 aa15.76■□□□□ 0.11
CPNE1-208ENST00000414711 RANBP9Q96S59 729 aa15.76■□□□□ 0.11
CPNE1-208ENST00000414711 ZYG11BQ9C0D3 744 aa15.76■□□□□ 0.11
CPNE1-208ENST00000414711 ACTL8Q9H568 366 aa15.76■□□□□ 0.11
CPNE1-208ENST00000414711 SIDT1Q9NXL6 827 aaKnown RBP15.76■□□□□ 0.11
CPNE1-208ENST00000414711 DOCK4Q8N1I0 1966 aa15.76■□□□□ 0.11
CPNE1-208ENST00000414711 ANKHD1Q8IWZ3 2542 aaKnown RBP15.75■□□□□ 0.11
CPNE1-208ENST00000414711 ARGFXA6NJG6 315 aa15.75■□□□□ 0.11
CPNE1-208ENST00000414711 MAP3K6O95382 1288 aa15.75■□□□□ 0.11
CPNE1-208ENST00000414711 IGSF6O95976 241 aa15.75■□□□□ 0.11
CPNE1-208ENST00000414711 GNPDA1P46926 289 aa15.75■□□□□ 0.11
CPNE1-208ENST00000414711 ITGA1P56199 1179 aa15.75■□□□□ 0.11
CPNE1-208ENST00000414711 RNASE9P60153 205 aaKnown RBP15.75■□□□□ 0.11
CPNE1-208ENST00000414711 FOXM1Q08050 763 aa15.75■□□□□ 0.11
CPNE1-208ENST00000414711 PEX6Q13608 980 aa15.75■□□□□ 0.11
CPNE1-208ENST00000414711 TESK1Q15569 626 aa15.75■□□□□ 0.11
CPNE1-208ENST00000414711 IQCKQ8N0W5 287 aa15.75■□□□□ 0.11
CPNE1-208ENST00000414711 RBMXL3Q8N7X1 1067 aaKnown RBP15.75■□□□□ 0.11
CPNE1-208ENST00000414711 SEC14L1Q92503 715 aa15.75■□□□□ 0.11
CPNE1-208ENST00000414711 SLC38A3Q99624 504 aa15.75■□□□□ 0.11
CPNE1-208ENST00000414711 ING2Q9H160 280 aa15.75■□□□□ 0.11
CPNE1-208ENST00000414711 TRNAU1APQ9NX07 287 aaKnown RBP15.75■□□□□ 0.11
CPNE1-208ENST00000414711 GOLGA6L22H0YM25 854 aa15.74■□□□□ 0.11
CPNE1-208ENST00000414711 PDE2AO00408 941 aaPredicted RBP15.74■□□□□ 0.11
CPNE1-208ENST00000414711 CETN3O15182 167 aa15.74■□□□□ 0.11
CPNE1-208ENST00000414711 MED7O43513 233 aa15.74■□□□□ 0.11
CPNE1-208ENST00000414711 RECQL5O94762 991 aaPredicted RBP15.74■□□□□ 0.11
CPNE1-208ENST00000414711 KIAA0754O94854 1291 aa15.74■□□□□ 0.11
CPNE1-208ENST00000414711 TMCC1O94876 653 aa15.74■□□□□ 0.11
CPNE1-208ENST00000414711 PIGNO95427 931 aa15.74■□□□□ 0.11
CPNE1-208ENST00000414711 MYCLP1P12525 358 aaPredicted RBP15.74■□□□□ 0.11
CPNE1-208ENST00000414711 TRIM23P36406 574 aa15.74■□□□□ 0.11
CPNE1-208ENST00000414711 GARSP41250 739 aaKnown RBP15.74■□□□□ 0.11
CPNE1-208ENST00000414711 FASLGP48023 281 aa15.74■□□□□ 0.11
CPNE1-208ENST00000414711 CDK18Q07002 472 aa15.74■□□□□ 0.11
CPNE1-208ENST00000414711 UGP2Q16851 508 aa15.74■□□□□ 0.11
CPNE1-208ENST00000414711 UGT8Q16880 541 aa15.74■□□□□ 0.11
CPNE1-208ENST00000414711 ACBD5Q5T8D3 534 aaPredicted RBP15.74■□□□□ 0.11
CPNE1-208ENST00000414711 RESP18Q5W5W9 173 aa15.74■□□□□ 0.11
CPNE1-208ENST00000414711 SPNS3Q6ZMD2 512 aa15.74■□□□□ 0.11
CPNE1-208ENST00000414711 HPS6Q86YV9 775 aa15.74■□□□□ 0.11
CPNE1-208ENST00000414711 RHOT1Q8IXI2 618 aa15.74■□□□□ 0.11
CPNE1-208ENST00000414711 CT55Q8WUE5 264 aa15.74■□□□□ 0.11
CPNE1-208ENST00000414711 TTYH3Q9C0H2 523 aa15.74■□□□□ 0.11
CPNE1-208ENST00000414711 KLHL3Q9UH77 587 aa15.74■□□□□ 0.11
CPNE1-208ENST00000414711 HPCAL4Q9UM19 191 aa15.74■□□□□ 0.11
CPNE1-208ENST00000414711 MFHAS1Q9Y4C4 1052 aa15.74■□□□□ 0.11
CPNE1-208ENST00000414711 ST14Q9Y5Y6 855 aa15.74■□□□□ 0.11
CPNE1-208ENST00000414711 TSPAN11A1L157 253 aa15.73■□□□□ 0.11
CPNE1-208ENST00000414711 ZSCAN5CA6NGD5 496 aaPredicted RBP15.73■□□□□ 0.11
CPNE1-208ENST00000414711 C21orf140B9A014 251 aa15.73■□□□□ 0.11
CPNE1-208ENST00000414711 TEX33O43247 280 aa15.73■□□□□ 0.11
CPNE1-208ENST00000414711 TFE3P19532 575 aaPredicted RBP15.73■□□□□ 0.11
CPNE1-208ENST00000414711 ME1P48163 572 aa15.73■□□□□ 0.11
CPNE1-208ENST00000414711 CTBSQ01459 385 aa15.73■□□□□ 0.11
CPNE1-208ENST00000414711 OLFML1Q6UWY5 402 aa15.73■□□□□ 0.11
CPNE1-208ENST00000414711 FAM183BPQ6ZVS7 135 aa15.73■□□□□ 0.11
CPNE1-208ENST00000414711 CISD2Q8N5K1 135 aaKnown RBP15.73■□□□□ 0.11
CPNE1-208ENST00000414711 NCSTNQ92542 709 aa15.73■□□□□ 0.11
CPNE1-208ENST00000414711 CPXM1Q96SM3 734 aa15.73■□□□□ 0.11
CPNE1-208ENST00000414711 NCAPGQ9BPX3 1015 aa15.73■□□□□ 0.11
CPNE1-208ENST00000414711 METTL14Q9HCE5 456 aaKnown RBP15.73■□□□□ 0.11
CPNE1-208ENST00000414711 LNPEPQ9UIQ6 1025 aa15.73■□□□□ 0.11
CPNE1-208ENST00000414711 SUFUQ9UMX1 484 aa15.73■□□□□ 0.11
CPNE1-208ENST00000414711 G3BP2Q9UN86 482 aaKnown RBP15.73■□□□□ 0.11
CPNE1-208ENST00000414711 ATP8A1Q9Y2Q0 1164 aa15.73■□□□□ 0.11
CPNE1-208ENST00000414711 TACC2O95359 2948 aa15.72■□□□□ 0.11
CPNE1-208ENST00000414711 GOLGA6L4A6NEF3 574 aa15.72■□□□□ 0.11
CPNE1-208ENST00000414711 LRRTM2O43300 516 aa15.72■□□□□ 0.11
CPNE1-208ENST00000414711 ZG16O60844 167 aa15.72■□□□□ 0.11
CPNE1-208ENST00000414711 CEACAM4O75871 244 aa15.72■□□□□ 0.11
CPNE1-208ENST00000414711 LETM1O95202 739 aaPredicted RBP15.72■□□□□ 0.11
CPNE1-208ENST00000414711 NDUFA10O95299 355 aa15.72■□□□□ 0.11
CPNE1-208ENST00000414711 FUCA1P04066 466 aa15.72■□□□□ 0.11
CPNE1-208ENST00000414711 MYL1P05976 194 aa15.72■□□□□ 0.11
CPNE1-208ENST00000414711 CCNYL3P0C7X3 344 aa15.72■□□□□ 0.11
CPNE1-208ENST00000414711 KRT5P13647 590 aa15.72■□□□□ 0.11
CPNE1-208ENST00000414711 ITGA3P26006 1051 aa15.72■□□□□ 0.11
CPNE1-208ENST00000414711 PTGER4P35408 488 aa15.72■□□□□ 0.11
CPNE1-208ENST00000414711 ACTR1BP42025 376 aa15.72■□□□□ 0.11
CPNE1-208ENST00000414711 SULT1E1P49888 294 aa15.72■□□□□ 0.11
CPNE1-208ENST00000414711 ACTR1AP61163 376 aa15.72■□□□□ 0.11
CPNE1-208ENST00000414711 RHOAP61586 193 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms