RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 MDGA1Q8NFP4 955 aa17.22■□□□□ 0.35
PTPRC-206ENST00000413409 RAB3IL1Q8TBN0 382 aa17.22■□□□□ 0.35
PTPRC-206ENST00000413409 ADAMTS14Q8WXS8 1223 aa17.22■□□□□ 0.35
PTPRC-206ENST00000413409 USP13Q92995 863 aaPredicted RBP17.22■□□□□ 0.35
PTPRC-206ENST00000413409 ZNF419Q96HQ0 510 aaPredicted RBP17.22■□□□□ 0.35
PTPRC-206ENST00000413409 FAM111AQ96PZ2 611 aa17.22■□□□□ 0.35
PTPRC-206ENST00000413409 SLC25A51Q9H1U9 297 aa17.22■□□□□ 0.35
PTPRC-206ENST00000413409 HAUS2Q9NVX0 235 aa17.22■□□□□ 0.35
PTPRC-206ENST00000413409 RBM22Q9NW64 420 aaKnown RBP eCLIP17.22■□□□□ 0.35
PTPRC-206ENST00000413409 KLHL14Q9P2G3 628 aa17.22■□□□□ 0.35
PTPRC-206ENST00000413409 TXNDC16Q9P2K2 825 aa17.22■□□□□ 0.35
PTPRC-206ENST00000413409 DNMT3LQ9UJW3 386 aa17.22■□□□□ 0.35
PTPRC-206ENST00000413409 TBX18O95935 607 aa17.21■□□□□ 0.35
PTPRC-206ENST00000413409 PLA2G2AP14555 144 aa17.21■□□□□ 0.35
PTPRC-206ENST00000413409 ADRA1AP35348 466 aa17.21■□□□□ 0.35
PTPRC-206ENST00000413409 MAGEA12P43365 314 aa17.21■□□□□ 0.35
PTPRC-206ENST00000413409 RENBPP51606 427 aa17.21■□□□□ 0.35
PTPRC-206ENST00000413409 YBEYP58557 167 aaPredicted RBP17.21■□□□□ 0.35
PTPRC-206ENST00000413409 ACTN3Q08043 901 aaPredicted RBP17.21■□□□□ 0.35
PTPRC-206ENST00000413409 MPP3Q13368 585 aa17.21■□□□□ 0.35
PTPRC-206ENST00000413409 OLIG2Q13516 323 aa17.21■□□□□ 0.35
PTPRC-206ENST00000413409 MROH9Q5TGP6 573 aa17.21■□□□□ 0.35
PTPRC-206ENST00000413409 FYB2Q5VWT5 728 aa17.21■□□□□ 0.35
PTPRC-206ENST00000413409 RAP1GAP2Q684P5 730 aa17.21■□□□□ 0.35
PTPRC-206ENST00000413409 FBXL22Q6P050 247 aa17.21■□□□□ 0.35
PTPRC-206ENST00000413409 FAM47EQ6ZV65 393 aa17.21■□□□□ 0.35
PTPRC-206ENST00000413409 MIB1Q86YT6 1006 aa17.21■□□□□ 0.35
PTPRC-206ENST00000413409 UNC5BQ8IZJ1 945 aa17.21■□□□□ 0.35
PTPRC-206ENST00000413409 HDDC3Q8N4P3 179 aa17.21■□□□□ 0.35
PTPRC-206ENST00000413409 TEX26Q8N6G2 289 aa17.21■□□□□ 0.35
PTPRC-206ENST00000413409 GIPC2Q8TF65 315 aa17.21■□□□□ 0.35
PTPRC-206ENST00000413409 SPOCK2Q92563 424 aa17.21■□□□□ 0.35
PTPRC-206ENST00000413409 HMCESQ96FZ2 354 aa17.21■□□□□ 0.35
PTPRC-206ENST00000413409 FCRL3Q96P31 734 aaPredicted RBP17.21■□□□□ 0.35
PTPRC-206ENST00000413409 GTPBP2Q9BX10 602 aaKnown RBP17.21■□□□□ 0.35
PTPRC-206ENST00000413409 CCSER2Q9H7U1 834 aa17.21■□□□□ 0.35
PTPRC-206ENST00000413409 PCMTD2Q9NV79 361 aa17.21■□□□□ 0.35
PTPRC-206ENST00000413409 ANKRD65E5RJM6 399 aa17.21■□□□□ 0.34
PTPRC-206ENST00000413409 GLRA3O75311 464 aa17.21■□□□□ 0.34
PTPRC-206ENST00000413409 NEBLO76041 1014 aa17.21■□□□□ 0.34
PTPRC-206ENST00000413409 ITGA2BP08514 1039 aa17.21■□□□□ 0.34
PTPRC-206ENST00000413409 TACR2P21452 398 aa17.21■□□□□ 0.34
PTPRC-206ENST00000413409 ITPKAP23677 461 aa17.21■□□□□ 0.34
PTPRC-206ENST00000413409 P2RY2P41231 377 aa17.21■□□□□ 0.34
PTPRC-206ENST00000413409 ALFQ53S48 1182 aa17.21■□□□□ 0.34
PTPRC-206ENST00000413409 PCID2Q5JVF3 399 aa17.21■□□□□ 0.34
PTPRC-206ENST00000413409 CERCAMQ5T4B2 595 aa17.21■□□□□ 0.34
PTPRC-206ENST00000413409 PDPK2PQ6A1A2 396 aa17.21■□□□□ 0.34
PTPRC-206ENST00000413409 KYAT3Q6YP21 454 aaKnown RBP17.21■□□□□ 0.34
PTPRC-206ENST00000413409 LPCAT2Q7L5N7 544 aa17.21■□□□□ 0.34
PTPRC-206ENST00000413409 TMEM150AQ86TG1 271 aa17.21■□□□□ 0.34
PTPRC-206ENST00000413409 NSMCE1Q8WV22 266 aa17.21■□□□□ 0.34
PTPRC-206ENST00000413409 IGSF8Q969P0 613 aa17.21■□□□□ 0.34
PTPRC-206ENST00000413409 AZIN2Q96A70 460 aa17.21■□□□□ 0.34
PTPRC-206ENST00000413409 PLD4Q96BZ4 506 aa17.21■□□□□ 0.34
PTPRC-206ENST00000413409 TRMT2BQ96GJ1 504 aaKnown RBP17.21■□□□□ 0.34
PTPRC-206ENST00000413409 MYRFLQ96LU7 910 aa17.21■□□□□ 0.34
PTPRC-206ENST00000413409 RBBP8Q99708 897 aa17.21■□□□□ 0.34
PTPRC-206ENST00000413409 FICDQ9BVA6 458 aa17.21■□□□□ 0.34
PTPRC-206ENST00000413409 MANSC1Q9H8J5 431 aa17.21■□□□□ 0.34
PTPRC-206ENST00000413409 SP110Q9HB58 689 aa17.21■□□□□ 0.34
PTPRC-206ENST00000413409 PILRBQ9UKJ0 227 aa17.21■□□□□ 0.34
PTPRC-206ENST00000413409 F5H5T6 163 aa17.2■□□□□ 0.34
PTPRC-206ENST00000413409 BIRC5O15392 142 aa17.2■□□□□ 0.34
PTPRC-206ENST00000413409 RAMP2O60895 175 aa17.2■□□□□ 0.34
PTPRC-206ENST00000413409 CNTN5O94779 1100 aa17.2■□□□□ 0.34
PTPRC-206ENST00000413409 CFIP05156 583 aa17.2■□□□□ 0.34
PTPRC-206ENST00000413409 FTH1P19P0C7X4 201 aa17.2■□□□□ 0.34
PTPRC-206ENST00000413409 TROVE2P10155 538 aaKnown RBP eCLIP17.2■□□□□ 0.34
PTPRC-206ENST00000413409 SPRP35270 261 aaPredicted RBP17.2■□□□□ 0.34
PTPRC-206ENST00000413409 ATP5C1P36542 298 aaKnown RBP17.2■□□□□ 0.34
PTPRC-206ENST00000413409 SERPINB8P50452 374 aa17.2■□□□□ 0.34
PTPRC-206ENST00000413409 LIMK2P53671 638 aa17.2■□□□□ 0.34
PTPRC-206ENST00000413409 IL10RBQ08334 325 aa17.2■□□□□ 0.34
PTPRC-206ENST00000413409 TRIP6Q15654 476 aaKnown RBP17.2■□□□□ 0.34
PTPRC-206ENST00000413409 INSCQ1MX18 579 aa17.2■□□□□ 0.34
PTPRC-206ENST00000413409 PEAR1Q5VY43 1037 aaPredicted RBP17.2■□□□□ 0.34
PTPRC-206ENST00000413409 NADSYN1Q6IA69 706 aa17.2■□□□□ 0.34
PTPRC-206ENST00000413409 DENND5AQ6IQ26 1287 aa17.2■□□□□ 0.34
PTPRC-206ENST00000413409 KDELC1Q6UW63 502 aa17.2■□□□□ 0.34
PTPRC-206ENST00000413409 TMEM92Q6UXU6 159 aa17.2■□□□□ 0.34
PTPRC-206ENST00000413409 CDHR3Q6ZTQ4 885 aa17.2■□□□□ 0.34
PTPRC-206ENST00000413409 OTOAQ7RTW8 1153 aa17.2■□□□□ 0.34
PTPRC-206ENST00000413409 TFAP2DQ7Z6R9 452 aa17.2■□□□□ 0.34
PTPRC-206ENST00000413409 NDUFAF2Q8N183 169 aa17.2■□□□□ 0.34
PTPRC-206ENST00000413409 PPHLN1Q8NEY8 458 aaKnown RBP17.2■□□□□ 0.34
PTPRC-206ENST00000413409 IPMKQ8NFU5 416 aa17.2■□□□□ 0.34
PTPRC-206ENST00000413409 SPATA22Q8NHS9 363 aa17.2■□□□□ 0.34
PTPRC-206ENST00000413409 IMP4Q96G21 291 aaKnown RBP17.2■□□□□ 0.34
PTPRC-206ENST00000413409 RPRD1AQ96P16 312 aaPredicted RBP17.2■□□□□ 0.34
PTPRC-206ENST00000413409 ECT2Q9H8V3 914 aa17.2■□□□□ 0.34
PTPRC-206ENST00000413409 SLCO1B3Q9NPD5 702 aa17.2■□□□□ 0.34
PTPRC-206ENST00000413409 ABCF3Q9NUQ8 709 aa17.2■□□□□ 0.34
PTPRC-206ENST00000413409 SLC12A4Q9UP95 1085 aa17.2■□□□□ 0.34
PTPRC-206ENST00000413409 USH1CQ9Y6N9 552 aa17.2■□□□□ 0.34
PTPRC-206ENST00000413409 MYO18BQ8IUG5 2567 aa17.2■□□□□ 0.34
PTPRC-206ENST00000413409 PCDH15Q96QU1 1955 aa17.19■□□□□ 0.34
PTPRC-206ENST00000413409 ZNF840PA6NDX5 716 aa17.19■□□□□ 0.34
PTPRC-206ENST00000413409 K7EQS6 105 aa17.19■□□□□ 0.34
PTPRC-206ENST00000413409 TIMM44O43615 452 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms