RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 PCDH18Q9HCL0 1135 aa19.24■□□□□ 0.67
CPSF7-204ENST00000413232 MRPL47Q9HD33 250 aaKnown RBP19.24■□□□□ 0.67
CPSF7-204ENST00000413232 SPATS2LQ9NUQ6 558 aaKnown RBP19.24■□□□□ 0.67
CPSF7-204ENST00000413232 MOSPD1Q9UJG1 213 aa19.24■□□□□ 0.67
CPSF7-204ENST00000413232 ST14Q9Y5Y6 855 aa19.24■□□□□ 0.67
CPSF7-204ENST00000413232 RNF215Q9Y6U7 377 aa19.24■□□□□ 0.67
CPSF7-204ENST00000413232 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.23■□□□□ 0.67
CPSF7-204ENST00000413232 PRSS38A1L453 326 aa19.23■□□□□ 0.67
CPSF7-204ENST00000413232 B4DGG1 531 aa19.23■□□□□ 0.67
CPSF7-204ENST00000413232 ERVH48-1M5A8F1 160 aa19.23■□□□□ 0.67
CPSF7-204ENST00000413232 HEXIM1O94992 359 aaKnown RBP19.23■□□□□ 0.67
CPSF7-204ENST00000413232 ITGA2BP08514 1039 aa19.23■□□□□ 0.67
CPSF7-204ENST00000413232 MYBL1P10243 752 aa19.23■□□□□ 0.67
CPSF7-204ENST00000413232 GLB1P16278 677 aa19.23■□□□□ 0.67
CPSF7-204ENST00000413232 ARL4AP40617 200 aa19.23■□□□□ 0.67
CPSF7-204ENST00000413232 INHBCP55103 352 aa19.23■□□□□ 0.67
CPSF7-204ENST00000413232 SLC25A11Q02978 314 aaKnown RBP19.23■□□□□ 0.67
CPSF7-204ENST00000413232 MMRN1Q13201 1228 aa19.23■□□□□ 0.67
CPSF7-204ENST00000413232 HLTFQ14527 1009 aaKnown RBP eCLIP19.23■□□□□ 0.67
CPSF7-204ENST00000413232 ZNF235Q14590 738 aa19.23■□□□□ 0.67
CPSF7-204ENST00000413232 BOLA3Q53S33 107 aa19.23■□□□□ 0.67
CPSF7-204ENST00000413232 DENND2CQ68D51 928 aa19.23■□□□□ 0.67
CPSF7-204ENST00000413232 TMCO3Q6UWJ1 677 aa19.23■□□□□ 0.67
CPSF7-204ENST00000413232 RAB11FIP2Q7L804 512 aa19.23■□□□□ 0.67
CPSF7-204ENST00000413232 TSPAN33Q86UF1 283 aa19.23■□□□□ 0.67
CPSF7-204ENST00000413232 NRROSQ86YC3 692 aa19.23■□□□□ 0.67
CPSF7-204ENST00000413232 CPNE8Q86YQ8 564 aa19.23■□□□□ 0.67
CPSF7-204ENST00000413232 CCNJLQ8IV13 435 aa19.23■□□□□ 0.67
CPSF7-204ENST00000413232 FBXO39Q8N4B4 442 aa19.23■□□□□ 0.67
CPSF7-204ENST00000413232 NUS1Q96E22 293 aa19.23■□□□□ 0.67
CPSF7-204ENST00000413232 WDR26Q9H7D7 661 aa19.23■□□□□ 0.67
CPSF7-204ENST00000413232 SUDS3Q9H7L9 328 aaPredicted RBP19.23■□□□□ 0.67
CPSF7-204ENST00000413232 APPL1Q9UKG1 709 aa19.23■□□□□ 0.67
CPSF7-204ENST00000413232 NPIPB15A6NHN6 443 aaPredicted RBP19.22■□□□□ 0.67
CPSF7-204ENST00000413232 K7ENP7 123 aa19.22■□□□□ 0.67
CPSF7-204ENST00000413232 SOCS5O75159 536 aa19.22■□□□□ 0.67
CPSF7-204ENST00000413232 CEACAM5P06731 702 aa19.22■□□□□ 0.67
CPSF7-204ENST00000413232 CD48P09326 243 aa19.22■□□□□ 0.67
CPSF7-204ENST00000413232 SLC5A2P31639 672 aa19.22■□□□□ 0.67
CPSF7-204ENST00000413232 CCKBRP32239 447 aa19.22■□□□□ 0.67
CPSF7-204ENST00000413232 VIPR1P32241 457 aa19.22■□□□□ 0.67
CPSF7-204ENST00000413232 PBX1P40424 430 aa19.22■□□□□ 0.67
CPSF7-204ENST00000413232 ETV3P41162 512 aa19.22■□□□□ 0.67
CPSF7-204ENST00000413232 CFHR1Q03591 330 aa19.22■□□□□ 0.67
CPSF7-204ENST00000413232 ZFP36L1Q07352 338 aaKnown RBP19.22■□□□□ 0.67
CPSF7-204ENST00000413232 SRSF6Q13247 344 aaKnown RBP19.22■□□□□ 0.67
CPSF7-204ENST00000413232 TGIF1Q15583 401 aa19.22■□□□□ 0.67
CPSF7-204ENST00000413232 C14orf28Q4W4Y0 310 aa19.22■□□□□ 0.67
CPSF7-204ENST00000413232 FIGNQ5HY92 759 aa19.22■□□□□ 0.67
CPSF7-204ENST00000413232 KIAA1614Q5VZ46 1190 aa19.22■□□□□ 0.67
CPSF7-204ENST00000413232 SPECC1LQ69YQ0 1117 aa19.22■□□□□ 0.67
CPSF7-204ENST00000413232 INO80CQ6PI98 192 aaPredicted RBP19.22■□□□□ 0.67
CPSF7-204ENST00000413232 Q6ZVL8 140 aa19.22■□□□□ 0.67
CPSF7-204ENST00000413232 SPRED1Q7Z699 444 aa19.22■□□□□ 0.67
CPSF7-204ENST00000413232 HEATR4Q86WZ0 1026 aa19.22■□□□□ 0.67
CPSF7-204ENST00000413232 OR6C4Q8NGE1 309 aa19.22■□□□□ 0.67
CPSF7-204ENST00000413232 TRIM11Q96F44 468 aa19.22■□□□□ 0.67
CPSF7-204ENST00000413232 TEX101Q9BY14 249 aa19.22■□□□□ 0.67
CPSF7-204ENST00000413232 DPEP2Q9H4A9 486 aa19.22■□□□□ 0.67
CPSF7-204ENST00000413232 LRIT1Q9P2V4 623 aa19.22■□□□□ 0.67
CPSF7-204ENST00000413232 A0A087X0T9 212 aa19.21■□□□□ 0.67
CPSF7-204ENST00000413232 B4GAT1O43505 415 aa19.21■□□□□ 0.67
CPSF7-204ENST00000413232 CPP00450 1065 aa19.21■□□□□ 0.67
CPSF7-204ENST00000413232 SERPINC1P01008 464 aa19.21■□□□□ 0.67
CPSF7-204ENST00000413232 PDHA1P08559 390 aa19.21■□□□□ 0.67
CPSF7-204ENST00000413232 FAM228BP0C875 321 aa19.21■□□□□ 0.67
CPSF7-204ENST00000413232 MYCLP1P12525 358 aaPredicted RBP19.21■□□□□ 0.67
CPSF7-204ENST00000413232 CTPS1P17812 591 aa19.21■□□□□ 0.67
CPSF7-204ENST00000413232 ITIH1P19827 911 aa19.21■□□□□ 0.67
CPSF7-204ENST00000413232 KELP23276 732 aa19.21■□□□□ 0.67
CPSF7-204ENST00000413232 ETV5P41161 510 aa19.21■□□□□ 0.67
CPSF7-204ENST00000413232 MLLT3P42568 568 aaPredicted RBP19.21■□□□□ 0.67
CPSF7-204ENST00000413232 POLD2P49005 469 aa19.21■□□□□ 0.67
CPSF7-204ENST00000413232 MAZP56270 477 aaKnown RBP19.21■□□□□ 0.67
CPSF7-204ENST00000413232 RHDQ02161 417 aa19.21■□□□□ 0.67
CPSF7-204ENST00000413232 LY6DQ14210 128 aa19.21■□□□□ 0.67
CPSF7-204ENST00000413232 PIGHQ14442 188 aaPredicted RBP19.21■□□□□ 0.67
CPSF7-204ENST00000413232 ATP13A4Q4VNC1 1196 aa19.21■□□□□ 0.67
CPSF7-204ENST00000413232 TAF1BQ53T94 588 aaPredicted RBP19.21■□□□□ 0.67
CPSF7-204ENST00000413232 SDK2Q58EX2 2172 aa19.21■□□□□ 0.67
CPSF7-204ENST00000413232 NIPA2Q8N8Q9 360 aa19.21■□□□□ 0.67
CPSF7-204ENST00000413232 GPBAR1Q8TDU6 330 aa19.21■□□□□ 0.67
CPSF7-204ENST00000413232 DTD2Q96FN9 168 aa19.21■□□□□ 0.67
CPSF7-204ENST00000413232 FRMD8Q9BZ67 464 aaPredicted RBP19.21■□□□□ 0.67
CPSF7-204ENST00000413232 CARS2Q9HA77 564 aaKnown RBP19.21■□□□□ 0.67
CPSF7-204ENST00000413232 PHTF1Q9UMS5 762 aa19.21■□□□□ 0.67
CPSF7-204ENST00000413232 PGLSO95336 258 aa19.2■□□□□ 0.66
CPSF7-204ENST00000413232 FGF1P05230 155 aa19.2■□□□□ 0.66
CPSF7-204ENST00000413232 PNLIPP16233 465 aa19.2■□□□□ 0.66
CPSF7-204ENST00000413232 AK4P27144 223 aaPredicted RBP19.2■□□□□ 0.66
CPSF7-204ENST00000413232 HSPA9P38646 679 aaKnown RBP19.2■□□□□ 0.66
CPSF7-204ENST00000413232 MMP13P45452 471 aa19.2■□□□□ 0.66
CPSF7-204ENST00000413232 CDK3Q00526 305 aa19.2■□□□□ 0.66
CPSF7-204ENST00000413232 B4GALNT1Q00973 533 aa19.2■□□□□ 0.66
CPSF7-204ENST00000413232 ZSCAN23Q3MJ62 389 aa19.2■□□□□ 0.66
CPSF7-204ENST00000413232 TDRD12Q587J7 1177 aaKnown RBP19.2■□□□□ 0.66
CPSF7-204ENST00000413232 TECPR1Q7Z6L1 1165 aa19.2■□□□□ 0.66
CPSF7-204ENST00000413232 C17orf82Q86X59 251 aaPredicted RBP19.2■□□□□ 0.66
CPSF7-204ENST00000413232 ATPAF2Q8N5M1 289 aa19.2■□□□□ 0.66
CPSF7-204ENST00000413232 TEKT4Q8WW24 435 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms