RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 MIPP30301 263 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 SLC5A2P31639 672 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 GRIA3P42263 894 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 NR4A2P43354 598 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 GDI2P50395 445 aaKnown RBP8.52□□□□□ -1.05
PBRM1-209ENST00000412587 BICRALQ6AI39 1079 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 UGT3A1Q6NUS8 523 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 MFSD7Q6UXD7 560 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 ZCCHC23Q6ZST2 131 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 RFPL4BQ6ZWI9 263 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 KIF18BQ86Y91 864 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 LSM14AQ8ND56 463 aaKnown RBP8.52□□□□□ -1.05
PBRM1-209ENST00000412587 FICDQ9BVA6 458 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 TTYH3Q9C0H2 523 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 SAV1Q9H4B6 383 aaPredicted RBP8.52□□□□□ -1.05
PBRM1-209ENST00000412587 POPDC2Q9HBU9 364 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 ANKHQ9HCJ1 492 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 KCNN3Q9UGI6 736 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 MKLN1Q9UL63 735 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 PLA2G4CQ9UP65 541 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 MRASO14807 208 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 TGFB1I1O43294 461 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 ARF4P18085 180 aaPredicted RBP8.52□□□□□ -1.05
PBRM1-209ENST00000412587 ABCG1P45844 678 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 HK2P52789 917 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 TP53BP2Q13625 1128 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 HNRNPDQ14103 355 aaKnown RBP8.52□□□□□ -1.05
PBRM1-209ENST00000412587 SWI5Q1ZZU3 235 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 ATP13A5Q4VNC0 1218 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 AGKQ53H12 422 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 RALGPS1Q5JS13 557 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 GPR180Q86V85 440 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 P2RY8Q86VZ1 359 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 LZTR1Q8N653 840 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 SLC15A4Q8N697 577 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 COLGALT1Q8NBJ5 622 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 UROC1Q96N76 676 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 DEFB118Q96PH6 123 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 CAB39LQ9H9S4 337 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 CCNB1IP1Q9NPC3 277 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 UXTQ9UBK9 157 aaPredicted RBP8.52□□□□□ -1.05
PBRM1-209ENST00000412587 PEX10O60683 326 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 XYLBO75191 536 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 SERPINF2P08697 491 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 CKBP12277 381 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 TSHRP16473 764 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 MSH3P20585 1137 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 OR1E1P30953 314 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 GRM5P41594 1212 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 RENBPP51606 427 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 KCNK10P57789 538 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 FAM98BQ52LJ0 330 aaKnown RBP8.52□□□□□ -1.05
PBRM1-209ENST00000412587 DENND1BQ6P3S1 775 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 UGT2A3Q6UWM9 527 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 KIAA0408Q6ZU52 694 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 TBC1D21Q8IYX1 336 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 TMEM199Q8N511 208 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 SHC3Q92529 594 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 LPPQ93052 612 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 CAPNS2Q96L46 248 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 HSFY1Q96LI6 401 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 KCTD10Q9H3F6 313 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 ACP6Q9NPH0 428 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 CUEDC1Q9NWM3 386 aaPredicted RBP8.52□□□□□ -1.05
PBRM1-209ENST00000412587 UBP1Q9NZI7 540 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 NCANO14594 1321 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 SF3B1O75533 1304 aaKnown RBP eCLIP8.52□□□□□ -1.058e-6■■■■■ 107
PBRM1-209ENST00000412587 PLIN4Q96Q06 1357 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 NALCNQ8IZF0 1738 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 LOC100506127A0A0U1RQW1 187 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 SMIM35A0A1B0GVV1 85 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 C2orf71A6NGG8 1288 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 SSX5O60225 188 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 ALX3O95076 343 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 VAPBO95292 243 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 MMP3P08254 477 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 FAM163BP0C2L3 166 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 M6PRP20645 277 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 TNK2Q07912 1038 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 PRKAA1Q13131 559 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 SEMA3AQ14563 771 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 N4BP2L1Q5TBK1 243 aaPredicted RBP8.52□□□□□ -1.05
PBRM1-209ENST00000412587 VWA5B1Q5TIE3 1220 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 ZNF57Q68EA5 555 aaPredicted RBP8.52□□□□□ -1.05
PBRM1-209ENST00000412587 ILDR2Q71H61 639 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 CCDC36Q8IYA8 594 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 ANKRD53Q8N9V6 530 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 DHRS9Q9BPW9 319 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 SLC25A23Q9BV35 468 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 ADGRE3Q9BY15 652 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 SEZ6LQ9BYH1 1024 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 ATP13A1Q9HD20 1204 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 SMPD3Q9NY59 655 aaPredicted RBP8.52□□□□□ -1.05
PBRM1-209ENST00000412587 SLC17A7Q9P2U7 560 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 HMGXB4Q9UGU5 601 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 ZNHIT2Q9UHR6 403 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 ANAPC2Q9UJX6 822 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 ZNF222Q9UK12 451 aa8.52□□□□□ -1.05
PBRM1-209ENST00000412587 DRG1Q9Y295 367 aaKnown RBP8.52□□□□□ -1.05
PBRM1-209ENST00000412587 CEPT1Q9Y6K0 416 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms