RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 PCDH8O95206 1070 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 CELF2O95319 508 aaKnown RBP7.4□□□□□ -1.23
PTPN3-203ENST00000412145 PROCP04070 461 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 MYBP10242 640 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 GNAZP19086 355 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 CHKAP35790 457 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 GRIA3P42263 894 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 RPS9P46781 194 aaKnown RBP7.4□□□□□ -1.23
PTPN3-203ENST00000412145 RGS8P57771 180 aaPredicted RBP7.4□□□□□ -1.23
PTPN3-203ENST00000412145 TAF5Q15542 800 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 ABCA11PQ4W5N1 156 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 FAXCQ5TGI0 409 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 ZNF513Q8N8E2 541 aaPredicted RBP7.4□□□□□ -1.23
PTPN3-203ENST00000412145 FAM98AQ8NCA5 519 aaKnown RBP7.4□□□□□ -1.23
PTPN3-203ENST00000412145 FBXO25Q8TCJ0 367 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 PRICKLE1Q96MT3 831 aaPredicted RBP7.4□□□□□ -1.23
PTPN3-203ENST00000412145 SLC4A9Q96Q91 983 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 HIST1H2AAQ96QV6 131 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 EHD4Q9H223 541 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 TMEM260Q9NX78 707 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 CCDC167Q9P0B6 97 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 PCDHGC3Q9UN70 934 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 PREX2Q70Z35 1606 aa7.4□□□□□ -1.23
PTPN3-203ENST00000412145 CBX4O00257 560 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 DCXO43602 365 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 CALCAP01258 141 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 ANPEPP15144 967 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 MAPK3P27361 379 aaPredicted RBP7.39□□□□□ -1.23
PTPN3-203ENST00000412145 IQSEC1Q6DN90 963 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 SERPINA13PQ6UXR4 307 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 MCOLN2Q8IZK6 566 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 PACRGLQ8N7B6 248 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 CNTD1Q8N815 330 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 ZNF224Q9NZL3 707 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 GHRLQ9UBU3 117 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 PCDHB1Q9Y5F3 818 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 RAB10P61026 200 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 LIPEQ05469 1076 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 BOP1Q14137 746 aaKnown RBP7.39□□□□□ -1.23
PTPN3-203ENST00000412145 PLEKHG4Q58EX7 1191 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 TAPT1Q6NXT6 567 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 RNF44Q7L0R7 432 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 PIGXQ8TBF5 258 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 SMG7Q92540 1137 aaKnown RBP7.39□□□□□ -1.23
PTPN3-203ENST00000412145 KBTBD4Q9NVX7 518 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 TMA7Q9Y2S6 64 aaKnown RBP7.39□□□□□ -1.23
PTPN3-203ENST00000412145 GRIN2DO15399 1336 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 ILVBLA1L0T0 632 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 SLC22A3O75751 556 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 CABYRO75952 493 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 CYP2B6P20813 491 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 ARL3P36405 182 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 DNASE1L1P49184 302 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 PRKD1Q15139 912 aaPredicted RBP7.39□□□□□ -1.23
PTPN3-203ENST00000412145 TTMPQ5BVD1 217 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 CRTC3Q6UUV7 619 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 PSTKQ8IV42 348 aaKnown RBP7.39□□□□□ -1.23
PTPN3-203ENST00000412145 MCEMP1Q8IX19 187 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 CMTR2Q8IYT2 770 aaKnown RBP7.39□□□□□ -1.23
PTPN3-203ENST00000412145 ANKFN1Q8N957 763 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 SLC16A10Q8TF71 515 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 EBNA1BP2Q99848 306 aaKnown RBP7.39□□□□□ -1.23
PTPN3-203ENST00000412145 ATP13A1Q9HD20 1204 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 MYNNQ9NPC7 610 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 SMPD3Q9NY59 655 aaPredicted RBP7.39□□□□□ -1.23
PTPN3-203ENST00000412145 PCDHGA3Q9Y5H0 932 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 TCEA3O75764 348 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 SLC6A3Q01959 620 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 CBLBQ13191 982 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 SLC9A4Q6AI14 798 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 ATG9AQ7Z3C6 839 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 LGR4Q9BXB1 951 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 KCNF1Q9H3M0 494 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 SPATA7Q9P0W8 599 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 MAGED1Q9Y5V3 778 aaPredicted RBP7.39□□□□□ -1.23
PTPN3-203ENST00000412145 ERCC6L2Q5T890 1561 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 CEMIPQ8WUJ3 1361 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 KERAO60938 352 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 B3GAT3O94766 335 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 KCNA5P22460 613 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 HSD17B2P37059 387 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 ALDH5A1P51649 535 aaPredicted RBP7.39□□□□□ -1.23
PTPN3-203ENST00000412145 FMR1Q06787 632 aaKnown RBP eCLIP7.39□□□□□ -1.23
PTPN3-203ENST00000412145 FASTKD3Q14CZ7 662 aaKnown RBP7.39□□□□□ -1.23
PTPN3-203ENST00000412145 MARCH10Q8NA82 808 aaPredicted RBP7.39□□□□□ -1.23
PTPN3-203ENST00000412145 BHLHE41Q9C0J9 482 aaPredicted RBP7.39□□□□□ -1.23
PTPN3-203ENST00000412145 GLS2Q9UI32 602 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 MAGI3Q5TCQ9 1506 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 LRRC7Q96NW7 1537 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 SLC12A8A0AV02 714 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 RGL2O15211 777 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 DHX15O43143 795 aaKnown RBP7.39□□□□□ -1.23
PTPN3-203ENST00000412145 FADS2O95864 444 aaKnown RBP7.39□□□□□ -1.23
PTPN3-203ENST00000412145 TOP3BO95985 862 aaKnown RBP7.39□□□□□ -1.23
PTPN3-203ENST00000412145 EFEMP1Q12805 493 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 ALG10Q5BKT4 473 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 CPTPQ5TA50 214 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 DNM1P34Q6PK57 102 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 TTC7BQ86TV6 843 aa7.39□□□□□ -1.23
PTPN3-203ENST00000412145 TATDN2Q93075 761 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms